RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 FIGNL2A6NMB9 653 aa8.09□□□□□ -1.11
TARDBP-220ENST00000618606 ARHGEF15O94989 841 aa8.09□□□□□ -1.11
TARDBP-220ENST00000618606 IGHA1P01876 353 aa8.09□□□□□ -1.11
TARDBP-220ENST00000618606 TUSC1Q2TAM9 212 aa8.09□□□□□ -1.11
TARDBP-220ENST00000618606 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.12
TARDBP-220ENST00000618606 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
TARDBP-220ENST00000618606 MAGEB6P1A0A0J9YX57 407 aa8.07□□□□□ -1.12
TARDBP-220ENST00000618606 CSPP1Q1MSJ5 1256 aa8.07□□□□□ -1.12
TARDBP-220ENST00000618606 PPP1R26Q5T8A7 1209 aaPredicted RBP8.07□□□□□ -1.12
TARDBP-220ENST00000618606 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
TARDBP-220ENST00000618606 TSC1Q92574 1164 aa8.07□□□□□ -1.12
TARDBP-220ENST00000618606 NUTM2BA6NNL0 878 aaPredicted RBP8.06□□□□□ -1.12
TARDBP-220ENST00000618606 NUTM2EB1AL46 878 aaPredicted RBP8.06□□□□□ -1.12
TARDBP-220ENST00000618606 LILRB3O75022 631 aa8.06□□□□□ -1.12
TARDBP-220ENST00000618606 ITGA6P23229 1130 aa8.06□□□□□ -1.12
TARDBP-220ENST00000618606 IRS1P35568 1242 aa8.06□□□□□ -1.12
TARDBP-220ENST00000618606 CBLBQ13191 982 aa8.06□□□□□ -1.12
TARDBP-220ENST00000618606 NUTM2DQ5VT03 806 aaPredicted RBP8.06□□□□□ -1.12
TARDBP-220ENST00000618606 KANK3Q6NY19 840 aa8.06□□□□□ -1.12
TARDBP-220ENST00000618606 NUTM2AQ8IVF1 878 aaPredicted RBP8.06□□□□□ -1.12
TARDBP-220ENST00000618606 FOXK2Q01167 660 aa8.05□□□□□ -1.12
TARDBP-220ENST00000618606 QPCTQ16769 361 aa8.05□□□□□ -1.12
TARDBP-220ENST00000618606 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
TARDBP-220ENST00000618606 GPAT2Q6NUI2 795 aa8.05□□□□□ -1.12
TARDBP-220ENST00000618606 SV2AQ7L0J3 742 aa8.05□□□□□ -1.12
TARDBP-220ENST00000618606 VWA5B2Q8N398 1253 aa8.05□□□□□ -1.12
TARDBP-220ENST00000618606 LIMD1Q9UGP4 676 aa8.05□□□□□ -1.12
TARDBP-220ENST00000618606 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
TARDBP-220ENST00000618606 HELBQ8NG08 1087 aaPredicted RBP8.04□□□□□ -1.12
TARDBP-220ENST00000618606 TRIM66O15016 1216 aa8.03□□□□□ -1.12
TARDBP-220ENST00000618606 MARSP56192 900 aaKnown RBP8.03□□□□□ -1.12
TARDBP-220ENST00000618606 SCARF2Q96GP6 870 aaPredicted RBP8.03□□□□□ -1.12
TARDBP-220ENST00000618606 CARD14Q9BXL6 1004 aa8.03□□□□□ -1.12
TARDBP-220ENST00000618606 CDV3Q9UKY7 258 aaKnown RBP8.03□□□□□ -1.12
TARDBP-220ENST00000618606 CDC14CA4D256 554 aa8.02□□□□□ -1.13
TARDBP-220ENST00000618606 CTSOP43234 321 aaPredicted RBP8.01□□□□□ -1.13
TARDBP-220ENST00000618606 DHX9Q08211 1270 aaKnown RBP8.01□□□□□ -1.13
TARDBP-220ENST00000618606 PDXDC2PQ6P474 469 aa8.01□□□□□ -1.13
TARDBP-220ENST00000618606 AK7Q96M32 723 aa8.01□□□□□ -1.13
TARDBP-220ENST00000618606 KCTD15Q96SI1 283 aaPredicted RBP8.01□□□□□ -1.13
TARDBP-220ENST00000618606 RTL5Q5HYW3 569 aaPredicted RBP8□□□□□ -1.13
TARDBP-220ENST00000618606 ADAMTS2O95450 1211 aa7.99□□□□□ -1.13
TARDBP-220ENST00000618606 ARHGAP9Q9BRR9 750 aa7.99□□□□□ -1.13
TARDBP-220ENST00000618606 SENP3-EIF4A1A0A087X0R7 540 aa7.98□□□□□ -1.13
TARDBP-220ENST00000618606 SRSF11Q05519 484 aaKnown RBP7.98□□□□□ -1.13
TARDBP-220ENST00000618606 LYPD4Q6UWN0 246 aa7.98□□□□□ -1.13
TARDBP-220ENST00000618606 RNF217Q8TC41 542 aa7.98□□□□□ -1.13
TARDBP-220ENST00000618606 SLC10A4Q96EP9 437 aa7.98□□□□□ -1.13
TARDBP-220ENST00000618606 AGBL1Q96MI9 1066 aa7.98□□□□□ -1.13
TARDBP-220ENST00000618606 INSM2Q96T92 566 aaPredicted RBP7.98□□□□□ -1.13
TARDBP-220ENST00000618606 RELBQ01201 579 aa7.97□□□□□ -1.13
TARDBP-220ENST00000618606 INTS6LQ5JSJ4 861 aaKnown RBP7.97□□□□□ -1.13
TARDBP-220ENST00000618606 MAP3K10Q02779 954 aa7.96□□□□□ -1.14
TARDBP-220ENST00000618606 POLMQ9NP87 494 aaPredicted RBP7.96□□□□□ -1.14
TARDBP-220ENST00000618606 CELA2BP08218 269 aaPredicted RBP7.95□□□□□ -1.14
TARDBP-220ENST00000618606 ZBTB33Q86T24 672 aa7.95□□□□□ -1.14
TARDBP-220ENST00000618606 FKBPLQ9UIM3 349 aa7.95□□□□□ -1.14
TARDBP-220ENST00000618606 CLK2P49760 499 aaKnown RBP7.94□□□□□ -1.14
TARDBP-220ENST00000618606 CTDSPL2Q05D32 466 aa7.94□□□□□ -1.14
TARDBP-220ENST00000618606 GAS6Q14393 721 aa7.94□□□□□ -1.14
TARDBP-220ENST00000618606 ENAMQ9NRM1 1142 aa7.94□□□□□ -1.14
TARDBP-220ENST00000618606 ZC3H4Q9UPT8 1303 aaKnown RBP7.94□□□□□ -1.14
TARDBP-220ENST00000618606 PDE4DQ08499 809 aa7.93□□□□□ -1.14
TARDBP-220ENST00000618606 ZNF395Q9H8N7 513 aaPredicted RBP7.93□□□□□ -1.14
TARDBP-220ENST00000618606 FOXD4L5Q5VV16 416 aaPredicted RBP7.92□□□□□ -1.14
TARDBP-220ENST00000618606 PHF20L1A8MW92 1017 aa7.91□□□□□ -1.14
TARDBP-220ENST00000618606 MSTNO14793 375 aa7.91□□□□□ -1.14
TARDBP-220ENST00000618606 ADH1AP07327 375 aa7.91□□□□□ -1.14
TARDBP-220ENST00000618606 PLA2G4EQ3MJ16 856 aa7.91□□□□□ -1.14
TARDBP-220ENST00000618606 OCSTAMPQ9BR26 566 aa7.91□□□□□ -1.14
TARDBP-220ENST00000618606 RSPH6AQ9H0K4 717 aa7.91□□□□□ -1.14
TARDBP-220ENST00000618606 CUEDC1Q9NWM3 386 aaPredicted RBP7.91□□□□□ -1.14
TARDBP-220ENST00000618606 GPSM3Q9Y4H4 160 aa7.91□□□□□ -1.14
TARDBP-220ENST00000618606 ADAM23O75077 832 aa7.9□□□□□ -1.14
TARDBP-220ENST00000618606 PTK2Q05397 1052 aa7.9□□□□□ -1.14
TARDBP-220ENST00000618606 NBPF20Q3BBV1 942 aa7.9□□□□□ -1.14
TARDBP-220ENST00000618606 XP32Q5T750 250 aa7.9□□□□□ -1.14
TARDBP-220ENST00000618606 LYSMD3Q7Z3D4 306 aa7.9□□□□□ -1.14
TARDBP-220ENST00000618606 GMCL1Q96IK5 515 aa7.9□□□□□ -1.14
TARDBP-220ENST00000618606 DCAF5Q96JK2 942 aa7.9□□□□□ -1.14
TARDBP-220ENST00000618606 TMPRSS4Q9NRS4 437 aa7.9□□□□□ -1.14
TARDBP-220ENST00000618606 LILRA1O75019 489 aa7.89□□□□□ -1.15
TARDBP-220ENST00000618606 PTGIRP43119 386 aa7.89□□□□□ -1.15
TARDBP-220ENST00000618606 KDF1Q8NAX2 398 aaPredicted RBP7.89□□□□□ -1.15
TARDBP-220ENST00000618606 ZNF784Q8NCA9 323 aaPredicted RBP7.89□□□□□ -1.15
TARDBP-220ENST00000618606 LRRN4Q8WUT4 740 aa7.89□□□□□ -1.15
TARDBP-220ENST00000618606 SLC24A3Q9HC58 644 aa7.89□□□□□ -1.15
TARDBP-220ENST00000618606 MBIPQ9NS73 344 aa7.89□□□□□ -1.15
TARDBP-220ENST00000618606 CNTNAP5Q8WYK1 1306 aa7.88□□□□□ -1.15
TARDBP-220ENST00000618606 ADD1P35611 737 aaKnown RBP7.88□□□□□ -1.15
TARDBP-220ENST00000618606 BEND7Q8N7W2 519 aaPredicted RBP7.88□□□□□ -1.15
TARDBP-220ENST00000618606 ADAM32Q8TC27 787 aa7.88□□□□□ -1.15
TARDBP-220ENST00000618606 SPOCK3Q9BQ16 436 aa7.88□□□□□ -1.15
TARDBP-220ENST00000618606 ITGB2P05107 769 aa7.87□□□□□ -1.15
TARDBP-220ENST00000618606 NR6A1Q15406 480 aa7.87□□□□□ -1.15
TARDBP-220ENST00000618606 ZNF837Q96EG3 531 aaPredicted RBP7.87□□□□□ -1.15
TARDBP-220ENST00000618606 POLR3EQ9NVU0 708 aa7.87□□□□□ -1.15
TARDBP-220ENST00000618606 ERVH48-1M5A8F1 160 aa7.86□□□□□ -1.15
TARDBP-220ENST00000618606 RNF144AP50876 292 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-220ENST00000618606 TRIM22Q8IYM9 498 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms