RNA–Protein interactions for RNA: ENST00000614285.4

CACNA1A-214, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-214ENST00000614285 PKD2Q13563 968 aa20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 NEUROD6Q96NK8 337 aa20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 TRIM22Q8IYM9 498 aa20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 FLIIQ13045 1269 aa20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 AAMPQ13685 434 aa20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 PPP1R9BQ96SB3 815 aa20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 TAOK3Q9H2K8 898 aa20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 MYBBP1AQ9BQG0 1328 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 API5Q9BZZ5 524 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-214ENST00000614285 NOL3O60936 208 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-214ENST00000614285 POLR3GO15318 223 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-214ENST00000614285 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
CACNA1A-214ENST00000614285 RRP9O43818 475 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-214ENST00000614285 DZIP1Q86YF9 867 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-214ENST00000614285 ARL1P40616 181 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-214ENST00000614285 WDR66Q8TBY9 1149 aa20.15■□□□□ 0.82
CACNA1A-214ENST00000614285 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-214ENST00000614285 STK38Q15208 465 aa20.15■□□□□ 0.82
CACNA1A-214ENST00000614285 SREK1Q8WXA9 508 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-214ENST00000614285 RRP7AQ9Y3A4 280 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-214ENST00000614285 CCDC6Q16204 474 aa20.15■□□□□ 0.82
CACNA1A-214ENST00000614285 TSNARE1Q96NA8 513 aa20.14■□□□□ 0.82
CACNA1A-214ENST00000614285 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.82
CACNA1A-214ENST00000614285 PSMC4P43686 418 aa20.14■□□□□ 0.81
CACNA1A-214ENST00000614285 FEZ2Q9UHY8 353 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-214ENST00000614285 RRP1P56182 461 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-214ENST00000614285 TNMDQ9H2S6 317 aa20.14■□□□□ 0.81
CACNA1A-214ENST00000614285 CCDC150Q8NCX0 1101 aa20.14■□□□□ 0.81
CACNA1A-214ENST00000614285 CCDC178Q5BJE1 867 aa20.14■□□□□ 0.81
CACNA1A-214ENST00000614285 SPECC1Q5M775 1068 aa20.13■□□□□ 0.81
CACNA1A-214ENST00000614285 CTNNA2P26232 953 aa20.13■□□□□ 0.81
CACNA1A-214ENST00000614285 MACROD2A1Z1Q3 448 aa20.13■□□□□ 0.81
CACNA1A-214ENST00000614285 VPS36Q86VN1 386 aa20.13■□□□□ 0.81
CACNA1A-214ENST00000614285 PPP1R14CQ8TAE6 165 aa20.13■□□□□ 0.81
CACNA1A-214ENST00000614285 LARP1Q6PKG0 1096 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-214ENST00000614285 SPECC1LQ69YQ0 1117 aa20.12■□□□□ 0.81
CACNA1A-214ENST00000614285 CALCOCO1Q9P1Z2 691 aa20.12■□□□□ 0.81
CACNA1A-214ENST00000614285 NUTM2FA1L443 756 aa20.12■□□□□ 0.81
CACNA1A-214ENST00000614285 TRAK2O60296 914 aa20.12■□□□□ 0.81
CACNA1A-214ENST00000614285 NUP155O75694 1391 aa20.12■□□□□ 0.81
CACNA1A-214ENST00000614285 KIF2AO00139 706 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-214ENST00000614285 GNL3LQ9NVN8 582 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-214ENST00000614285 FSD2A1L4K1 749 aa20.11■□□□□ 0.81
CACNA1A-214ENST00000614285 RIC3Q7Z5B4 369 aa20.11■□□□□ 0.81
CACNA1A-214ENST00000614285 MNAT1P51948 309 aa20.11■□□□□ 0.81
CACNA1A-214ENST00000614285 FBF1Q8TES7 1133 aa20.11■□□□□ 0.81
CACNA1A-214ENST00000614285 TCHPQ9BT92 498 aa20.11■□□□□ 0.81
CACNA1A-214ENST00000614285 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.11■□□□□ 0.81
CACNA1A-214ENST00000614285 ANKRD30AQ9BXX3 1397 aa20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 ME1P48163 572 aa20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 EIF5P55010 431 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 RGS22Q8NE09 1264 aa20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 EVC2Q86UK5 1308 aa20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 SLU7O95391 586 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 FERMT1Q9BQL6 677 aa20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 ARHGAP29Q52LW3 1261 aa20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 CASQ1P31415 396 aa20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 UBXN4Q92575 508 aa20.1■□□□□ 0.81
CACNA1A-214ENST00000614285 SATB1Q01826 763 aa20.09■□□□□ 0.81
CACNA1A-214ENST00000614285 SSBP05455 408 aaKnown RBP eCLIP20.09■□□□□ 0.81
CACNA1A-214ENST00000614285 TPD52P55327 224 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-214ENST00000614285 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
CACNA1A-214ENST00000614285 CDKL5O76039 1030 aa20.09■□□□□ 0.81
CACNA1A-214ENST00000614285 NOL7Q9UMY1 257 aaKnown RBP20.08■□□□□ 0.81
CACNA1A-214ENST00000614285 SMTNL1A8MU46 457 aa20.08■□□□□ 0.8
CACNA1A-214ENST00000614285 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.8
CACNA1A-214ENST00000614285 PPP1R1BQ9UD71 204 aaPredicted RBP20.08■□□□□ 0.8
CACNA1A-214ENST00000614285 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.8
CACNA1A-214ENST00000614285 MXRA7P84157 204 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 FIBPO43427 364 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 CEP57L1Q8IYX8 460 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 CDC45O75419 566 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 SPA17Q15506 151 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 CEP135Q66GS9 1140 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 IKBKGQ9Y6K9 419 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 PDIA4P13667 645 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 GTF2A1P52655 376 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 COG6Q9Y2V7 657 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 RAI14Q9P0K7 980 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 ODF2LQ9ULJ1 636 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 TNIKQ9UKE5 1360 aa20.07■□□□□ 0.8
CACNA1A-214ENST00000614285 CCDC57Q2TAC2 916 aa20.06■□□□□ 0.8
CACNA1A-214ENST00000614285 RPUSD2Q8IZ73 545 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-214ENST00000614285 MAP7D1Q3KQU3 841 aa20.06■□□□□ 0.8
CACNA1A-214ENST00000614285 MKRN1Q9UHC7 482 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-214ENST00000614285 ZNF76P36508 570 aa20.06■□□□□ 0.8
CACNA1A-214ENST00000614285 BBXQ8WY36 941 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-214ENST00000614285 SH3BP5O60239 455 aa20.05■□□□□ 0.8
CACNA1A-214ENST00000614285 FSD1Q9BTV5 496 aa20.05■□□□□ 0.8
CACNA1A-214ENST00000614285 CCDC69A6NI79 296 aa20.05■□□□□ 0.8
CACNA1A-214ENST00000614285 PPP4R3AQ6IN85 833 aa20.05■□□□□ 0.8
CACNA1A-214ENST00000614285 DDX12PQ92771 950 aa20.05■□□□□ 0.8
CACNA1A-214ENST00000614285 UBTFL1P0CB47 393 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-214ENST00000614285 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-214ENST00000614285 CWC25Q9NXE8 425 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-214ENST00000614285 CEP83Q9Y592 693 aa20.05■□□□□ 0.8
CACNA1A-214ENST00000614285 LMAN1P49257 510 aa20.04■□□□□ 0.8
CACNA1A-214ENST00000614285 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms