RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 SHPRHQ149N8 1683 aa20.9■□□□□ 0.94
CCL3-206ENST00000614051 HAP1P54257 671 aaPredicted RBP20.89■□□□□ 0.94
CCL3-206ENST00000614051 COL3A1P02461 1466 aaPredicted RBP20.89■□□□□ 0.93
CCL3-206ENST00000614051 RGPD5Q99666 1765 aa20.89■□□□□ 0.93
CCL3-206ENST00000614051 SPATA31A6Q5VVP1 1343 aa20.89■□□□□ 0.93
CCL3-206ENST00000614051 CDK12Q9NYV4 1490 aaPredicted RBP20.88■□□□□ 0.93
CCL3-206ENST00000614051 AMPHP49418 695 aa20.88■□□□□ 0.93
CCL3-206ENST00000614051 ARHGEF25Q86VW2 580 aa20.88■□□□□ 0.93
CCL3-206ENST00000614051 HSP90AB2PQ58FF8 381 aa20.87■□□□□ 0.93
CCL3-206ENST00000614051 POTEAQ6S8J7 498 aa20.87■□□□□ 0.93
CCL3-206ENST00000614051 CFAP53Q96M91 514 aa20.87■□□□□ 0.93
CCL3-206ENST00000614051 KIAA0232Q92628 1395 aa20.86■□□□□ 0.93
CCL3-206ENST00000614051 HOXC9P31274 260 aa20.86■□□□□ 0.93
CCL3-206ENST00000614051 COL18A1P39060 1754 aa20.86■□□□□ 0.93
CCL3-206ENST00000614051 CHRNA2Q15822 529 aa20.85■□□□□ 0.93
CCL3-206ENST00000614051 PNISRQ8TF01 805 aaKnown RBP20.85■□□□□ 0.93
CCL3-206ENST00000614051 FLT4P35916 1363 aa20.85■□□□□ 0.93
CCL3-206ENST00000614051 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
CCL3-206ENST00000614051 NUTM2BA6NNL0 878 aaPredicted RBP20.84■□□□□ 0.93
CCL3-206ENST00000614051 NUTM2EB1AL46 878 aaPredicted RBP20.84■□□□□ 0.93
CCL3-206ENST00000614051 NUTM2AQ8IVF1 878 aaPredicted RBP20.84■□□□□ 0.93
CCL3-206ENST00000614051 FAM9BQ8IZU0 186 aa20.84■□□□□ 0.93
CCL3-206ENST00000614051 INSRP06213 1382 aa20.84■□□□□ 0.93
CCL3-206ENST00000614051 IP6K1Q92551 441 aa20.83■□□□□ 0.93
CCL3-206ENST00000614051 RTL1A6NKG5 1358 aa20.82■□□□□ 0.92
CCL3-206ENST00000614051 CPDO75976 1380 aa20.82■□□□□ 0.92
CCL3-206ENST00000614051 AXIN2Q9Y2T1 843 aa20.82■□□□□ 0.92
CCL3-206ENST00000614051 KIF24Q5T7B8 1368 aa20.82■□□□□ 0.92
CCL3-206ENST00000614051 DIAPH1O60610 1272 aaKnown RBP20.81■□□□□ 0.92
CCL3-206ENST00000614051 EIF4A2Q14240 407 aaKnown RBP20.81■□□□□ 0.92
CCL3-206ENST00000614051 MEX3CQ5U5Q3 659 aaKnown RBP20.81■□□□□ 0.92
CCL3-206ENST00000614051 LTV1Q96GA3 475 aaPredicted RBP20.81■□□□□ 0.92
CCL3-206ENST00000614051 PRDM11Q9NQV5 511 aa20.81■□□□□ 0.92
CCL3-206ENST00000614051 ADAMTS2O95450 1211 aa20.8■□□□□ 0.92
CCL3-206ENST00000614051 IL13P35225 146 aa20.8■□□□□ 0.92
CCL3-206ENST00000614051 ZNF772Q68DY9 489 aaPredicted RBP20.8■□□□□ 0.92
CCL3-206ENST00000614051 RGPD2P0DJD1 1756 aa20.79■□□□□ 0.92
CCL3-206ENST00000614051 FAM83GA6ND36 823 aa20.79■□□□□ 0.92
CCL3-206ENST00000614051 LMO7Q8WWI1 1683 aa20.79■□□□□ 0.92
CCL3-206ENST00000614051 U2SURPO15042 1029 aaKnown RBP20.78■□□□□ 0.92
CCL3-206ENST00000614051 WDR43Q15061 677 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCL3-206ENST00000614051 ADAMTS8Q9UP79 889 aa20.78■□□□□ 0.92
CCL3-206ENST00000614051 CAMTA1Q9Y6Y1 1673 aa20.77■□□□□ 0.91
CCL3-206ENST00000614051 BLMP54132 1417 aaPredicted RBP20.76■□□□□ 0.91
CCL3-206ENST00000614051 RGPD1P0DJD0 1748 aa20.76■□□□□ 0.91
CCL3-206ENST00000614051 COL14A1Q05707 1796 aaKnown RBP20.76■□□□□ 0.91
CCL3-206ENST00000614051 ABCC6O95255 1503 aa20.76■□□□□ 0.91
CCL3-206ENST00000614051 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
CCL3-206ENST00000614051 LRP6O75581 1613 aa20.75■□□□□ 0.91
CCL3-206ENST00000614051 U2AF1L5P0DN76 240 aaPredicted RBP20.75■□□□□ 0.91
CCL3-206ENST00000614051 U2AF1Q01081 240 aaKnown RBP eCLIP20.75■□□□□ 0.91
CCL3-206ENST00000614051 ANKRD24Q8TF21 1146 aa20.75■□□□□ 0.91
CCL3-206ENST00000614051 PLCH1Q4KWH8 1693 aa20.74■□□□□ 0.91
CCL3-206ENST00000614051 EYA1Q99502 592 aa20.72■□□□□ 0.91
CCL3-206ENST00000614051 HMOX1P09601 288 aa20.71■□□□□ 0.91
CCL3-206ENST00000614051 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
CCL3-206ENST00000614051 ERBB3P21860 1342 aa20.7■□□□□ 0.9
CCL3-206ENST00000614051 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
CCL3-206ENST00000614051 NBPF6Q5VWK0 638 aa20.7■□□□□ 0.9
CCL3-206ENST00000614051 AEBP1Q8IUX7 1158 aa20.7■□□□□ 0.9
CCL3-206ENST00000614051 USHBP1Q8N6Y0 703 aa20.7■□□□□ 0.9
CCL3-206ENST00000614051 NBPF4Q96M43 638 aa20.7■□□□□ 0.9
CCL3-206ENST00000614051 YTHDC1Q96MU7 727 aaKnown RBP20.7■□□□□ 0.9
CCL3-206ENST00000614051 BTG4Q9NY30 223 aa20.7■□□□□ 0.9
CCL3-206ENST00000614051 COL5A2P05997 1499 aaPredicted RBP20.7■□□□□ 0.9
CCL3-206ENST00000614051 CSB-PGBD3P0DP91 1061 aa20.69■□□□□ 0.9
CCL3-206ENST00000614051 IGSF1Q8N6C5 1336 aa20.68■□□□□ 0.9
CCL3-206ENST00000614051 SULT6B1Q6IMI4 303 aa20.68■□□□□ 0.9
CCL3-206ENST00000614051 STRN4Q9NRL3 753 aa20.68■□□□□ 0.9
CCL3-206ENST00000614051 NRAPQ86VF7 1730 aa20.68■□□□□ 0.9
CCL3-206ENST00000614051 FAM208AQ9UK61 1670 aaKnown RBP20.67■□□□□ 0.9
CCL3-206ENST00000614051 RXRBP28702 533 aa20.67■□□□□ 0.9
CCL3-206ENST00000614051 C8orf37Q96NL8 207 aa20.67■□□□□ 0.9
CCL3-206ENST00000614051 RSPH6AQ9H0K4 717 aa20.67■□□□□ 0.9
CCL3-206ENST00000614051 EVA1CP58658 441 aa20.66■□□□□ 0.9
CCL3-206ENST00000614051 NLRP2Q9NX02 1062 aa20.66■□□□□ 0.9
CCL3-206ENST00000614051 LARP1Q6PKG0 1096 aaKnown RBP20.65■□□□□ 0.9
CCL3-206ENST00000614051 NWD2Q9ULI1 1742 aa20.65■□□□□ 0.9
CCL3-206ENST00000614051 WDR17Q8IZU2 1322 aa20.65■□□□□ 0.9
CCL3-206ENST00000614051 PRKAR2BP31323 418 aa20.64■□□□□ 0.89
CCL3-206ENST00000614051 NGLY1Q96IV0 654 aa20.64■□□□□ 0.89
CCL3-206ENST00000614051 FCHSD2O94868 740 aa20.63■□□□□ 0.89
CCL3-206ENST00000614051 PLEKHF1Q96S99 279 aa20.63■□□□□ 0.89
CCL3-206ENST00000614051 SLIT2O94813 1529 aa20.63■□□□□ 0.89
CCL3-206ENST00000614051 TOM1L2Q6ZVM7 507 aa20.62■□□□□ 0.89
CCL3-206ENST00000614051 RUNDC1Q96C34 613 aa20.62■□□□□ 0.89
CCL3-206ENST00000614051 KDRP35968 1356 aa20.62■□□□□ 0.89
CCL3-206ENST00000614051 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
CCL3-206ENST00000614051 AFF2P51816 1311 aa20.6■□□□□ 0.89
CCL3-206ENST00000614051 HNRNPUQ00839 825 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCL3-206ENST00000614051 PHACTR3Q96KR7 559 aa20.6■□□□□ 0.89
CCL3-206ENST00000614051 APAF1O14727 1248 aa20.59■□□□□ 0.89
CCL3-206ENST00000614051 BCL9LQ86UU0 1499 aa20.59■□□□□ 0.89
CCL3-206ENST00000614051 FNBP4Q8N3X1 1017 aaPredicted RBP20.58■□□□□ 0.89
CCL3-206ENST00000614051 USP35Q9P2H5 1018 aa20.58■□□□□ 0.89
CCL3-206ENST00000614051 SALL2Q9Y467 1007 aaPredicted RBP20.58■□□□□ 0.89
CCL3-206ENST00000614051 CRB1P82279 1406 aa20.58■□□□□ 0.89
CCL3-206ENST00000614051 CARD10Q9BWT7 1032 aa20.57■□□□□ 0.88
CCL3-206ENST00000614051 PNNQ9H307 717 aaKnown RBP20.57■□□□□ 0.88
CCL3-206ENST00000614051 QTRT2Q9H974 415 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms