RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 PRDM11Q9NQV5 511 aa15.98■□□□□ 0.15
VPS45-212ENST00000611412 AXIN2Q9Y2T1 843 aa15.98■□□□□ 0.15
VPS45-212ENST00000611412 U2SURPO15042 1029 aaKnown RBP15.98■□□□□ 0.15
VPS45-212ENST00000611412 DIAPH1O60610 1272 aaKnown RBP15.98■□□□□ 0.15
VPS45-212ENST00000611412 IP6K1Q92551 441 aa15.98■□□□□ 0.15
VPS45-212ENST00000611412 SENP3-EIF4A1A0A087X0R7 540 aa15.97■□□□□ 0.15
VPS45-212ENST00000611412 EIF4A2Q14240 407 aaKnown RBP15.97■□□□□ 0.15
VPS45-212ENST00000611412 SHPRHQ149N8 1683 aa15.97■□□□□ 0.15
VPS45-212ENST00000611412 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.15
VPS45-212ENST00000611412 CPDO75976 1380 aa15.95■□□□□ 0.14
VPS45-212ENST00000611412 FAM83GA6ND36 823 aa15.95■□□□□ 0.14
VPS45-212ENST00000611412 IL13P35225 146 aa15.95■□□□□ 0.14
VPS45-212ENST00000611412 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
VPS45-212ENST00000611412 ADAMTS8Q9UP79 889 aa15.95■□□□□ 0.14
VPS45-212ENST00000611412 RGPD5Q99666 1765 aa15.95■□□□□ 0.14
VPS45-212ENST00000611412 RTL1A6NKG5 1358 aa15.95■□□□□ 0.14
VPS45-212ENST00000611412 INSRP06213 1382 aa15.95■□□□□ 0.14
VPS45-212ENST00000611412 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
VPS45-212ENST00000611412 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
VPS45-212ENST00000611412 COL18A1P39060 1754 aa15.93■□□□□ 0.14
VPS45-212ENST00000611412 FBXO41Q8TF61 875 aa15.93■□□□□ 0.14
VPS45-212ENST00000611412 KIF24Q5T7B8 1368 aa15.93■□□□□ 0.14
VPS45-212ENST00000611412 ANKRD24Q8TF21 1146 aa15.93■□□□□ 0.14
VPS45-212ENST00000611412 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
VPS45-212ENST00000611412 HMOX1P09601 288 aa15.92■□□□□ 0.14
VPS45-212ENST00000611412 CCDC146Q8IYE0 955 aa15.91■□□□□ 0.14
VPS45-212ENST00000611412 USHBP1Q8N6Y0 703 aa15.91■□□□□ 0.14
VPS45-212ENST00000611412 CAMTA1Q9Y6Y1 1673 aa15.91■□□□□ 0.14
VPS45-212ENST00000611412 LRP6O75581 1613 aa15.91■□□□□ 0.14
VPS45-212ENST00000611412 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
VPS45-212ENST00000611412 BLMP54132 1417 aaPredicted RBP15.91■□□□□ 0.14
VPS45-212ENST00000611412 BTG4Q9NY30 223 aa15.9■□□□□ 0.14
VPS45-212ENST00000611412 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
VPS45-212ENST00000611412 AEBP1Q8IUX7 1158 aa15.9■□□□□ 0.14
VPS45-212ENST00000611412 EYA1Q99502 592 aa15.9■□□□□ 0.14
VPS45-212ENST00000611412 SPATA31A6Q5VVP1 1343 aa15.89■□□□□ 0.13
VPS45-212ENST00000611412 LMO7Q8WWI1 1683 aa15.89■□□□□ 0.13
VPS45-212ENST00000611412 C8orf37Q96NL8 207 aa15.89■□□□□ 0.13
VPS45-212ENST00000611412 RGPD2P0DJD1 1756 aa15.89■□□□□ 0.13
VPS45-212ENST00000611412 ERBB3P21860 1342 aa15.89■□□□□ 0.13
VPS45-212ENST00000611412 NBPF6Q5VWK0 638 aa15.88■□□□□ 0.13
VPS45-212ENST00000611412 SULT6B1Q6IMI4 303 aa15.88■□□□□ 0.13
VPS45-212ENST00000611412 NBPF4Q96M43 638 aa15.88■□□□□ 0.13
VPS45-212ENST00000611412 COL14A1Q05707 1796 aaKnown RBP15.88■□□□□ 0.13
VPS45-212ENST00000611412 EVA1CP58658 441 aa15.87■□□□□ 0.13
VPS45-212ENST00000611412 MEX3CQ5U5Q3 659 aaKnown RBP15.87■□□□□ 0.13
VPS45-212ENST00000611412 NLRP2Q9NX02 1062 aa15.87■□□□□ 0.13
VPS45-212ENST00000611412 COL5A2P05997 1499 aaPredicted RBP15.87■□□□□ 0.13
VPS45-212ENST00000611412 RGPD1P0DJD0 1748 aa15.86■□□□□ 0.13
VPS45-212ENST00000611412 LARP1Q6PKG0 1096 aaKnown RBP15.86■□□□□ 0.13
VPS45-212ENST00000611412 IGSF1Q8N6C5 1336 aa15.86■□□□□ 0.13
VPS45-212ENST00000611412 PLCH1Q4KWH8 1693 aa15.86■□□□□ 0.13
VPS45-212ENST00000611412 ABCC6O95255 1503 aa15.85■□□□□ 0.13
VPS45-212ENST00000611412 NGLY1Q96IV0 654 aa15.85■□□□□ 0.13
VPS45-212ENST00000611412 RSPH6AQ9H0K4 717 aa15.85■□□□□ 0.13
VPS45-212ENST00000611412 SALL2Q9Y467 1007 aaPredicted RBP15.85■□□□□ 0.13
VPS45-212ENST00000611412 PRKAR2BP31323 418 aa15.85■□□□□ 0.13
VPS45-212ENST00000611412 TOM1L2Q6ZVM7 507 aa15.85■□□□□ 0.13
VPS45-212ENST00000611412 HNRNPUQ00839 825 aaKnown RBP eCLIP15.84■□□□□ 0.13
VPS45-212ENST00000611412 USP35Q9P2H5 1018 aa15.83■□□□□ 0.13
VPS45-212ENST00000611412 WDR17Q8IZU2 1322 aa15.83■□□□□ 0.13
VPS45-212ENST00000611412 FCHSD2O94868 740 aa15.82■□□□□ 0.12
VPS45-212ENST00000611412 PHACTR3Q96KR7 559 aa15.82■□□□□ 0.12
VPS45-212ENST00000611412 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
VPS45-212ENST00000611412 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
VPS45-212ENST00000611412 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
VPS45-212ENST00000611412 APAF1O14727 1248 aa15.81■□□□□ 0.12
VPS45-212ENST00000611412 SLIT2O94813 1529 aa15.81■□□□□ 0.12
VPS45-212ENST00000611412 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
VPS45-212ENST00000611412 MAPK8IP3Q9UPT6 1336 aa15.8■□□□□ 0.12
VPS45-212ENST00000611412 NRAPQ86VF7 1730 aa15.8■□□□□ 0.12
VPS45-212ENST00000611412 KDRP35968 1356 aa15.79■□□□□ 0.12
VPS45-212ENST00000611412 TCP11L2Q8N4U5 519 aa15.79■□□□□ 0.12
VPS45-212ENST00000611412 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
VPS45-212ENST00000611412 FAM208AQ9UK61 1670 aaKnown RBP15.79■□□□□ 0.12
VPS45-212ENST00000611412 CRB1P82279 1406 aa15.78■□□□□ 0.12
VPS45-212ENST00000611412 AFF2P51816 1311 aa15.78■□□□□ 0.12
VPS45-212ENST00000611412 UNC5CLQ8IV45 518 aa15.78■□□□□ 0.12
VPS45-212ENST00000611412 USP21Q9UK80 565 aa15.78■□□□□ 0.12
VPS45-212ENST00000611412 BCL9LQ86UU0 1499 aa15.77■□□□□ 0.12
VPS45-212ENST00000611412 FNBP4Q8N3X1 1017 aaPredicted RBP15.77■□□□□ 0.12
VPS45-212ENST00000611412 CARD10Q9BWT7 1032 aa15.77■□□□□ 0.12
VPS45-212ENST00000611412 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.12
VPS45-212ENST00000611412 NWD2Q9ULI1 1742 aa15.77■□□□□ 0.12
VPS45-212ENST00000611412 NEFMP07197 916 aa15.77■□□□□ 0.11
VPS45-212ENST00000611412 NCAPD2Q15021 1401 aa15.76■□□□□ 0.11
VPS45-212ENST00000611412 MEGF6O75095 1541 aa15.76■□□□□ 0.11
VPS45-212ENST00000611412 RAPGEF4Q8WZA2 1011 aa15.75■□□□□ 0.11
VPS45-212ENST00000611412 MTHFSDQ2M296 383 aaKnown RBP15.75■□□□□ 0.11
VPS45-212ENST00000611412 TATP17735 454 aaPredicted RBP15.74■□□□□ 0.11
VPS45-212ENST00000611412 TMPOP42166 694 aaKnown RBP15.74■□□□□ 0.11
VPS45-212ENST00000611412 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
VPS45-212ENST00000611412 RIPK4P57078 832 aa15.73■□□□□ 0.11
VPS45-212ENST00000611412 SPATA31A1Q5TZJ5 1347 aa15.73■□□□□ 0.11
VPS45-212ENST00000611412 NFE2L2Q16236 605 aa15.72■□□□□ 0.11
VPS45-212ENST00000611412 SPATA31A5Q5VU36 1347 aa15.72■□□□□ 0.11
VPS45-212ENST00000611412 SPATA31A7Q8IWB4 1347 aa15.72■□□□□ 0.11
VPS45-212ENST00000611412 IL2RBP14784 551 aa15.72■□□□□ 0.11
VPS45-212ENST00000611412 VPS72Q15906 364 aa15.72■□□□□ 0.11
VPS45-212ENST00000611412 PLEKHO1Q53GL0 409 aaPredicted RBP15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms