RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 SLC12A5Q9H2X9 1139 aa14.01□□□□□ -0.17
CTSA-215ENST00000607187 NINLQ9Y2I6 1382 aa14□□□□□ -0.17
CTSA-215ENST00000607187 BRWD3Q6RI45 1802 aa14□□□□□ -0.17
CTSA-215ENST00000607187 LMO7Q8WWI1 1683 aa14□□□□□ -0.17
CTSA-215ENST00000607187 USP54Q70EL1 1684 aa13.99□□□□□ -0.17
CTSA-215ENST00000607187 TMF1P82094 1093 aa13.99□□□□□ -0.17
CTSA-215ENST00000607187 CHRNA2Q15822 529 aa13.99□□□□□ -0.17
CTSA-215ENST00000607187 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
CTSA-215ENST00000607187 ONECUT3O60422 494 aaPredicted RBP13.98□□□□□ -0.17
CTSA-215ENST00000607187 HDGFL2Q7Z4V5 671 aaPredicted RBP13.98□□□□□ -0.17
CTSA-215ENST00000607187 UPF1Q92900 1129 aaKnown RBP eCLIP13.98□□□□□ -0.17
CTSA-215ENST00000607187 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
CTSA-215ENST00000607187 CAMTA1Q9Y6Y1 1673 aa13.98□□□□□ -0.17
CTSA-215ENST00000607187 CCDC9Q9Y3X0 531 aaKnown RBP13.97□□□□□ -0.17
CTSA-215ENST00000607187 EDC4Q6P2E9 1401 aaKnown RBP13.97□□□□□ -0.17
CTSA-215ENST00000607187 COL18A1P39060 1754 aa13.96□□□□□ -0.17
CTSA-215ENST00000607187 SPATA31A5Q5VU36 1347 aa13.96□□□□□ -0.17
CTSA-215ENST00000607187 SPATA31A7Q8IWB4 1347 aa13.96□□□□□ -0.17
CTSA-215ENST00000607187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.96□□□□□ -0.17
CTSA-215ENST00000607187 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
CTSA-215ENST00000607187 CDCA8Q53HL2 280 aa13.95□□□□□ -0.18
CTSA-215ENST00000607187 RGPD5Q99666 1765 aa13.95□□□□□ -0.18
CTSA-215ENST00000607187 NFAT5O94916 1531 aa13.95□□□□□ -0.18
CTSA-215ENST00000607187 NME9Q86XW9 330 aa13.94□□□□□ -0.18
CTSA-215ENST00000607187 SEPT12Q8IYM1 358 aa13.94□□□□□ -0.18
CTSA-215ENST00000607187 KCNH5Q8NCM2 988 aa13.94□□□□□ -0.18
CTSA-215ENST00000607187 AATKQ6ZMQ8 1374 aa13.94□□□□□ -0.18
CTSA-215ENST00000607187 ANKRD36BQ8N2N9 1353 aa13.94□□□□□ -0.18
CTSA-215ENST00000607187 SPATA31A1Q5TZJ5 1347 aa13.93□□□□□ -0.18
CTSA-215ENST00000607187 STRN4Q9NRL3 753 aa13.93□□□□□ -0.18
CTSA-215ENST00000607187 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
CTSA-215ENST00000607187 MYOM1P52179 1685 aa13.93□□□□□ -0.18
CTSA-215ENST00000607187 COL5A2P05997 1499 aaPredicted RBP13.93□□□□□ -0.18
CTSA-215ENST00000607187 THSD7AQ9UPZ6 1657 aa13.92□□□□□ -0.18
CTSA-215ENST00000607187 LTN1O94822 1766 aa13.92□□□□□ -0.18
CTSA-215ENST00000607187 CAPN15O75808 1086 aa13.92□□□□□ -0.18
CTSA-215ENST00000607187 EVA1CP58658 441 aa13.92□□□□□ -0.18
CTSA-215ENST00000607187 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
CTSA-215ENST00000607187 FAM98CQ17RN3 349 aaKnown RBP13.92□□□□□ -0.18
CTSA-215ENST00000607187 ARHGEF25Q86VW2 580 aa13.92□□□□□ -0.18
CTSA-215ENST00000607187 LARP1Q6PKG0 1096 aaKnown RBP13.91□□□□□ -0.18
CTSA-215ENST00000607187 OVOS2A0A0J9YW53 1432 aa13.9□□□□□ -0.18
CTSA-215ENST00000607187 OVOS2Q6IE36 1432 aa13.9□□□□□ -0.18
CTSA-215ENST00000607187 ZBTB7CA1YPR0 619 aa13.9□□□□□ -0.18
CTSA-215ENST00000607187 RGL2O15211 777 aa13.9□□□□□ -0.18
CTSA-215ENST00000607187 SOX12O15370 315 aa13.9□□□□□ -0.18
CTSA-215ENST00000607187 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
CTSA-215ENST00000607187 ABCC6O95255 1503 aa13.9□□□□□ -0.19
CTSA-215ENST00000607187 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
CTSA-215ENST00000607187 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
CTSA-215ENST00000607187 A0A0G2JS52 829 aa13.88□□□□□ -0.19
CTSA-215ENST00000607187 MYT1Q01538 1121 aa13.88□□□□□ -0.19
CTSA-215ENST00000607187 BARGINQ6ZT62 677 aa13.88□□□□□ -0.19
CTSA-215ENST00000607187 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
CTSA-215ENST00000607187 SPRYD3Q8NCJ5 442 aa13.88□□□□□ -0.19
CTSA-215ENST00000607187 USP35Q9P2H5 1018 aa13.88□□□□□ -0.19
CTSA-215ENST00000607187 CRB1P82279 1406 aa13.88□□□□□ -0.19
CTSA-215ENST00000607187 KIF20BQ96Q89 1820 aa13.87□□□□□ -0.19
CTSA-215ENST00000607187 TCP11L2Q8N4U5 519 aa13.87□□□□□ -0.19
CTSA-215ENST00000607187 TSHZ2Q9NRE2 1034 aa13.86□□□□□ -0.19
CTSA-215ENST00000607187 THRAP3Q9Y2W1 955 aaKnown RBP13.86□□□□□ -0.19
CTSA-215ENST00000607187 WDR17Q8IZU2 1322 aa13.86□□□□□ -0.19
CTSA-215ENST00000607187 WNK3Q9BYP7 1800 aa13.85□□□□□ -0.19
CTSA-215ENST00000607187 PARP4Q9UKK3 1724 aaKnown RBP13.85□□□□□ -0.19
CTSA-215ENST00000607187 FYB1O15117 783 aa13.85□□□□□ -0.19
CTSA-215ENST00000607187 CCDC125Q86Z20 511 aa13.85□□□□□ -0.19
CTSA-215ENST00000607187 COG3Q96JB2 828 aa13.85□□□□□ -0.19
CTSA-215ENST00000607187 CARD14Q9BXL6 1004 aa13.85□□□□□ -0.19
CTSA-215ENST00000607187 TOM1L2Q6ZVM7 507 aa13.84□□□□□ -0.19
CTSA-215ENST00000607187 BLMP54132 1417 aaPredicted RBP13.83□□□□□ -0.2
CTSA-215ENST00000607187 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
CTSA-215ENST00000607187 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
CTSA-215ENST00000607187 CSB-PGBD3P0DP91 1061 aa13.81□□□□□ -0.2
CTSA-215ENST00000607187 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
CTSA-215ENST00000607187 CARD10Q9BWT7 1032 aa13.81□□□□□ -0.2
CTSA-215ENST00000607187 GGNBP2Q9H3C7 697 aa13.81□□□□□ -0.2
CTSA-215ENST00000607187 ERBB3P21860 1342 aa13.81□□□□□ -0.2
CTSA-215ENST00000607187 LRRC37A3O60309 1634 aa13.8□□□□□ -0.2
CTSA-215ENST00000607187 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
CTSA-215ENST00000607187 C11orf95C9JLR9 678 aaPredicted RBP13.8□□□□□ -0.2
CTSA-215ENST00000607187 FBLN1P23142 703 aa13.8□□□□□ -0.2
CTSA-215ENST00000607187 FAM182BQ5T319 152 aa13.8□□□□□ -0.2
CTSA-215ENST00000607187 IP6K1Q92551 441 aa13.8□□□□□ -0.2
CTSA-215ENST00000607187 RGPD1P0DJD0 1748 aa13.8□□□□□ -0.2
CTSA-215ENST00000607187 PDE3BQ13370 1112 aa13.79□□□□□ -0.2
CTSA-215ENST00000607187 MAP3K19Q56UN5 1328 aa13.79□□□□□ -0.2
CTSA-215ENST00000607187 ANKRD26Q9UPS8 1709 aa13.78□□□□□ -0.2
CTSA-215ENST00000607187 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
CTSA-215ENST00000607187 FAM196AQ6ZSG2 479 aa13.78□□□□□ -0.2
CTSA-215ENST00000607187 CDCA7Q9BWT1 371 aaPredicted RBP13.78□□□□□ -0.2
CTSA-215ENST00000607187 CGNL1Q0VF96 1302 aa13.78□□□□□ -0.2
CTSA-215ENST00000607187 CCDC7Q96M83 1385 aa13.78□□□□□ -0.2
CTSA-215ENST00000607187 DISP2A7MBM2 1401 aa13.78□□□□□ -0.2
CTSA-215ENST00000607187 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
CTSA-215ENST00000607187 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
CTSA-215ENST00000607187 ABCB7O75027 752 aa13.77□□□□□ -0.21
CTSA-215ENST00000607187 HOXC9P31274 260 aa13.77□□□□□ -0.21
CTSA-215ENST00000607187 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
CTSA-215ENST00000607187 SRCAPQ6ZRS2 3230 aa13.77□□□□□ -0.21
CTSA-215ENST00000607187 SBF2Q86WG5 1849 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms