RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 COL18A1P39060 1754 aa9.75□□□□□ -0.85
LINC00458-204ENST00000606055 KAT6BQ8WYB5 2073 aa9.75□□□□□ -0.85
LINC00458-204ENST00000606055 ZBTB7CA1YPR0 619 aa9.75□□□□□ -0.85
LINC00458-204ENST00000606055 FAM83GA6ND36 823 aa9.75□□□□□ -0.85
LINC00458-204ENST00000606055 GCP02774 474 aa9.75□□□□□ -0.85
LINC00458-204ENST00000606055 NME9Q86XW9 330 aa9.75□□□□□ -0.85
LINC00458-204ENST00000606055 PRKRIP1Q9H875 184 aaPredicted RBP9.75□□□□□ -0.85
LINC00458-204ENST00000606055 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
LINC00458-204ENST00000606055 NFAT5O94916 1531 aa9.75□□□□□ -0.85
LINC00458-204ENST00000606055 WNK3Q9BYP7 1800 aa9.75□□□□□ -0.85
LINC00458-204ENST00000606055 CHRNA2Q15822 529 aa9.74□□□□□ -0.85
LINC00458-204ENST00000606055 MORC1Q86VD1 984 aa9.74□□□□□ -0.85
LINC00458-204ENST00000606055 BTG4Q9NY30 223 aa9.74□□□□□ -0.85
LINC00458-204ENST00000606055 GLI3P10071 1580 aa9.74□□□□□ -0.85
LINC00458-204ENST00000606055 SRCAPQ6ZRS2 3230 aa9.73□□□□□ -0.85
LINC00458-204ENST00000606055 SOX12O15370 315 aa9.73□□□□□ -0.85
LINC00458-204ENST00000606055 ANP32CO43423 234 aa9.73□□□□□ -0.85
LINC00458-204ENST00000606055 DIEXFQ68CQ4 756 aaKnown RBP9.73□□□□□ -0.85
LINC00458-204ENST00000606055 MYBBP1AQ9BQG0 1328 aaKnown RBP9.73□□□□□ -0.85
LINC00458-204ENST00000606055 PLEKHG2Q9H7P9 1386 aa9.73□□□□□ -0.85
LINC00458-204ENST00000606055 FAM208AQ9UK61 1670 aaKnown RBP9.72□□□□□ -0.85
LINC00458-204ENST00000606055 EVA1CP58658 441 aa9.72□□□□□ -0.85
LINC00458-204ENST00000606055 VPS72Q15906 364 aa9.72□□□□□ -0.85
LINC00458-204ENST00000606055 ARHGEF25Q86VW2 580 aa9.72□□□□□ -0.85
LINC00458-204ENST00000606055 GJD4Q96KN9 370 aaPredicted RBP9.72□□□□□ -0.85
LINC00458-204ENST00000606055 GGNBP2Q9H3C7 697 aa9.72□□□□□ -0.85
LINC00458-204ENST00000606055 RGS12O14924 1447 aa9.72□□□□□ -0.85
LINC00458-204ENST00000606055 BLMP54132 1417 aaPredicted RBP9.72□□□□□ -0.85
LINC00458-204ENST00000606055 CAMTA1Q9Y6Y1 1673 aa9.71□□□□□ -0.85
LINC00458-204ENST00000606055 CCER2I3L3R5 266 aa9.71□□□□□ -0.86
LINC00458-204ENST00000606055 STRN4Q9NRL3 753 aa9.71□□□□□ -0.86
LINC00458-204ENST00000606055 ZRANB1Q9UGI0 708 aa9.71□□□□□ -0.86
LINC00458-204ENST00000606055 RGPD2P0DJD1 1756 aa9.7□□□□□ -0.86
LINC00458-204ENST00000606055 POLKQ9UBT6 870 aa9.7□□□□□ -0.86
LINC00458-204ENST00000606055 FLT4P35916 1363 aa9.7□□□□□ -0.86
LINC00458-204ENST00000606055 A0A0G2JS52 829 aa9.69□□□□□ -0.86
LINC00458-204ENST00000606055 COL5A2P05997 1499 aaPredicted RBP9.69□□□□□ -0.86
LINC00458-204ENST00000606055 PPP2R1AP30153 589 aa9.69□□□□□ -0.86
LINC00458-204ENST00000606055 MYT1Q01538 1121 aa9.69□□□□□ -0.86
LINC00458-204ENST00000606055 CC2D1BQ5T0F9 858 aaKnown RBP9.69□□□□□ -0.86
LINC00458-204ENST00000606055 IP6K1Q92551 441 aa9.69□□□□□ -0.86
LINC00458-204ENST00000606055 PARP4Q9UKK3 1724 aaKnown RBP9.68□□□□□ -0.86
LINC00458-204ENST00000606055 THSD7AQ9UPZ6 1657 aa9.68□□□□□ -0.86
LINC00458-204ENST00000606055 MAP3K19Q56UN5 1328 aa9.68□□□□□ -0.86
LINC00458-204ENST00000606055 SPATA31A5Q5VU36 1347 aa9.68□□□□□ -0.86
LINC00458-204ENST00000606055 SPATA31A7Q8IWB4 1347 aa9.68□□□□□ -0.86
LINC00458-204ENST00000606055 CFAP53Q96M91 514 aa9.68□□□□□ -0.86
LINC00458-204ENST00000606055 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
LINC00458-204ENST00000606055 UPF1Q92900 1129 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINC00458-204ENST00000606055 CRB1P82279 1406 aa9.66□□□□□ -0.86
LINC00458-204ENST00000606055 NCAPD2Q15021 1401 aa9.66□□□□□ -0.86
LINC00458-204ENST00000606055 SPATA31A1Q5TZJ5 1347 aa9.66□□□□□ -0.86
LINC00458-204ENST00000606055 HOXC9P31274 260 aa9.66□□□□□ -0.86
LINC00458-204ENST00000606055 MTHFSP49914 203 aa9.66□□□□□ -0.86
LINC00458-204ENST00000606055 FAM98CQ17RN3 349 aaKnown RBP9.66□□□□□ -0.86
LINC00458-204ENST00000606055 LARP1Q6PKG0 1096 aaKnown RBP9.66□□□□□ -0.86
LINC00458-204ENST00000606055 SEPT12Q8IYM1 358 aa9.66□□□□□ -0.86
LINC00458-204ENST00000606055 USP35Q9P2H5 1018 aa9.66□□□□□ -0.86
LINC00458-204ENST00000606055 RGPD1P0DJD0 1748 aa9.65□□□□□ -0.86
LINC00458-204ENST00000606055 WDR17Q8IZU2 1322 aa9.65□□□□□ -0.86
LINC00458-204ENST00000606055 AMPHP49418 695 aa9.65□□□□□ -0.86
LINC00458-204ENST00000606055 TOM1L2Q6ZVM7 507 aa9.65□□□□□ -0.86
LINC00458-204ENST00000606055 THRAP3Q9Y2W1 955 aaKnown RBP9.65□□□□□ -0.86
LINC00458-204ENST00000606055 SBF2Q86WG5 1849 aa9.65□□□□□ -0.86
LINC00458-204ENST00000606055 COL3A1P02461 1466 aaPredicted RBP9.65□□□□□ -0.87
LINC00458-204ENST00000606055 PEAK1Q9H792 1746 aa9.65□□□□□ -0.87
LINC00458-204ENST00000606055 LRRC37A3O60309 1634 aa9.64□□□□□ -0.87
LINC00458-204ENST00000606055 ERBB3P21860 1342 aa9.64□□□□□ -0.87
LINC00458-204ENST00000606055 ONECUT3O60422 494 aaPredicted RBP9.64□□□□□ -0.87
LINC00458-204ENST00000606055 TCP11L2Q8N4U5 519 aa9.64□□□□□ -0.87
LINC00458-204ENST00000606055 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
LINC00458-204ENST00000606055 AXIN2Q9Y2T1 843 aa9.64□□□□□ -0.87
LINC00458-204ENST00000606055 NCBP3Q53F19 620 aaKnown RBP9.63□□□□□ -0.87
LINC00458-204ENST00000606055 BARGINQ6ZT62 677 aa9.63□□□□□ -0.87
LINC00458-204ENST00000606055 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
LINC00458-204ENST00000606055 KDRP35968 1356 aa9.63□□□□□ -0.87
LINC00458-204ENST00000606055 DIAPH1O60610 1272 aaKnown RBP9.62□□□□□ -0.87
LINC00458-204ENST00000606055 IL13P35225 146 aa9.62□□□□□ -0.87
LINC00458-204ENST00000606055 RRS1Q15050 365 aaKnown RBP9.62□□□□□ -0.87
LINC00458-204ENST00000606055 KRT27Q7Z3Y8 459 aa9.62□□□□□ -0.87
LINC00458-204ENST00000606055 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
LINC00458-204ENST00000606055 CARD10Q9BWT7 1032 aa9.62□□□□□ -0.87
LINC00458-204ENST00000606055 PNNQ9H307 717 aaKnown RBP9.62□□□□□ -0.87
LINC00458-204ENST00000606055 IGSF1Q8N6C5 1336 aa9.61□□□□□ -0.87
LINC00458-204ENST00000606055 FBLN1P23142 703 aa9.61□□□□□ -0.87
LINC00458-204ENST00000606055 HSP90AB2PQ58FF8 381 aa9.61□□□□□ -0.87
LINC00458-204ENST00000606055 NGEFQ8N5V2 710 aa9.61□□□□□ -0.87
LINC00458-204ENST00000606055 LTV1Q96GA3 475 aaPredicted RBP9.61□□□□□ -0.87
LINC00458-204ENST00000606055 CDCA7Q9BWT1 371 aaPredicted RBP9.61□□□□□ -0.87
LINC00458-204ENST00000606055 NLRP2Q9NX02 1062 aa9.61□□□□□ -0.87
LINC00458-204ENST00000606055 EP400Q96L91 3159 aa9.6□□□□□ -0.87
LINC00458-204ENST00000606055 TNS1Q9HBL0 1735 aaKnown RBP9.6□□□□□ -0.87
LINC00458-204ENST00000606055 FCHSD2O94868 740 aa9.6□□□□□ -0.87
LINC00458-204ENST00000606055 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
LINC00458-204ENST00000606055 PDE3BQ13370 1112 aa9.6□□□□□ -0.87
LINC00458-204ENST00000606055 EIF4A2Q14240 407 aaKnown RBP9.6□□□□□ -0.87
LINC00458-204ENST00000606055 PNISRQ8TF01 805 aaKnown RBP9.6□□□□□ -0.87
LINC00458-204ENST00000606055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.6□□□□□ -0.87
LINC00458-204ENST00000606055 PPM1GO15355 546 aaPredicted RBP9.59□□□□□ -0.87
LINC00458-204ENST00000606055 VIRMAQ69YN4 1812 aaKnown RBP9.59□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms