RNA–Protein interactions for RNA: ENST00000604324.1

CRX-206, Transcript of cone-rod homeobox, humanhuman

Gene CRX, Length 1,467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-206ENST00000604324 SPATA31A5Q5VU36 1347 aa13.65□□□□□ -0.22
CRX-206ENST00000604324 SPATA31A7Q8IWB4 1347 aa13.65□□□□□ -0.22
CRX-206ENST00000604324 RGPD5Q99666 1765 aa13.64□□□□□ -0.23
CRX-206ENST00000604324 CCDC7Q96M83 1385 aa13.63□□□□□ -0.23
CRX-206ENST00000604324 AXIN2Q9Y2T1 843 aa13.63□□□□□ -0.23
CRX-206ENST00000604324 ANKRD26Q9UPS8 1709 aa13.63□□□□□ -0.23
CRX-206ENST00000604324 WASHC2AQ641Q2 1341 aa13.62□□□□□ -0.23
CRX-206ENST00000604324 BRWD3Q6RI45 1802 aa13.62□□□□□ -0.23
CRX-206ENST00000604324 SPATA31A1Q5TZJ5 1347 aa13.62□□□□□ -0.23
CRX-206ENST00000604324 GGNBP2Q9H3C7 697 aa13.61□□□□□ -0.23
CRX-206ENST00000604324 LARP1Q6PKG0 1096 aaKnown RBP13.61□□□□□ -0.23
CRX-206ENST00000604324 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
CRX-206ENST00000604324 COG3Q96JB2 828 aa13.61□□□□□ -0.23
CRX-206ENST00000604324 PANK3Q9H999 370 aa13.61□□□□□ -0.23
CRX-206ENST00000604324 EP400Q96L91 3159 aa13.6□□□□□ -0.23
CRX-206ENST00000604324 PEAK1Q9H792 1746 aa13.6□□□□□ -0.23
CRX-206ENST00000604324 MAP3K19Q56UN5 1328 aa13.59□□□□□ -0.23
CRX-206ENST00000604324 CRB1P82279 1406 aa13.59□□□□□ -0.23
CRX-206ENST00000604324 WNK3Q9BYP7 1800 aa13.59□□□□□ -0.23
CRX-206ENST00000604324 CGNL1Q0VF96 1302 aa13.58□□□□□ -0.24
CRX-206ENST00000604324 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.24
CRX-206ENST00000604324 BLMP54132 1417 aaPredicted RBP13.58□□□□□ -0.24
CRX-206ENST00000604324 SOX12O15370 315 aa13.58□□□□□ -0.24
CRX-206ENST00000604324 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
CRX-206ENST00000604324 BARGINQ6ZT62 677 aa13.58□□□□□ -0.24
CRX-206ENST00000604324 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
CRX-206ENST00000604324 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
CRX-206ENST00000604324 NSD2O96028 1365 aa13.58□□□□□ -0.24
CRX-206ENST00000604324 FBLN1P23142 703 aa13.57□□□□□ -0.24
CRX-206ENST00000604324 STRN4Q9NRL3 753 aa13.57□□□□□ -0.24
CRX-206ENST00000604324 ERBB3P21860 1342 aa13.57□□□□□ -0.24
CRX-206ENST00000604324 DISP2A7MBM2 1401 aa13.57□□□□□ -0.24
CRX-206ENST00000604324 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
CRX-206ENST00000604324 AMER1Q5JTC6 1135 aaPredicted RBP13.56□□□□□ -0.24
CRX-206ENST00000604324 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
CRX-206ENST00000604324 IP6K1Q92551 441 aa13.56□□□□□ -0.24
CRX-206ENST00000604324 KIF24Q5T7B8 1368 aa13.56□□□□□ -0.24
CRX-206ENST00000604324 FAM208AQ9UK61 1670 aaKnown RBP13.56□□□□□ -0.24
CRX-206ENST00000604324 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
CRX-206ENST00000604324 HOXC9P31274 260 aa13.55□□□□□ -0.24
CRX-206ENST00000604324 TCP11L2Q8N4U5 519 aa13.55□□□□□ -0.24
CRX-206ENST00000604324 CARD10Q9BWT7 1032 aa13.55□□□□□ -0.24
CRX-206ENST00000604324 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
CRX-206ENST00000604324 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
CRX-206ENST00000604324 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
CRX-206ENST00000604324 NPC1L1Q9UHC9 1359 aa13.54□□□□□ -0.24
CRX-206ENST00000604324 LRRC37A3O60309 1634 aa13.54□□□□□ -0.24
CRX-206ENST00000604324 ZBTB7CA1YPR0 619 aa13.54□□□□□ -0.24
CRX-206ENST00000604324 EVA1CP58658 441 aa13.54□□□□□ -0.24
CRX-206ENST00000604324 MAP2P11137 1827 aaKnown RBP13.53□□□□□ -0.24
CRX-206ENST00000604324 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
CRX-206ENST00000604324 INSRP06213 1382 aa13.52□□□□□ -0.24
CRX-206ENST00000604324 FLT4P35916 1363 aa13.52□□□□□ -0.24
CRX-206ENST00000604324 NCAPD2Q15021 1401 aa13.52□□□□□ -0.25
CRX-206ENST00000604324 ANKRD24Q8TF21 1146 aa13.52□□□□□ -0.25
CRX-206ENST00000604324 UPF1Q92900 1129 aaKnown RBP eCLIP13.52□□□□□ -0.25
CRX-206ENST00000604324 RGPD2P0DJD1 1756 aa13.51□□□□□ -0.25
CRX-206ENST00000604324 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
CRX-206ENST00000604324 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
CRX-206ENST00000604324 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
CRX-206ENST00000604324 DIEXFQ68CQ4 756 aaKnown RBP13.49□□□□□ -0.25
CRX-206ENST00000604324 KRT27Q7Z3Y8 459 aa13.49□□□□□ -0.25
CRX-206ENST00000604324 USP35Q9P2H5 1018 aa13.49□□□□□ -0.25
CRX-206ENST00000604324 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
CRX-206ENST00000604324 HSP90AB2PQ58FF8 381 aa13.48□□□□□ -0.25
CRX-206ENST00000604324 AMPHP49418 695 aa13.48□□□□□ -0.25
CRX-206ENST00000604324 BCL9O00512 1426 aa13.47□□□□□ -0.25
CRX-206ENST00000604324 TNS2Q63HR2 1409 aa13.47□□□□□ -0.25
CRX-206ENST00000604324 CDCA7Q9BWT1 371 aaPredicted RBP13.47□□□□□ -0.25
CRX-206ENST00000604324 CSB-PGBD3P0DP91 1061 aa13.46□□□□□ -0.25
CRX-206ENST00000604324 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
CRX-206ENST00000604324 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
CRX-206ENST00000604324 NLRP2Q9NX02 1062 aa13.45□□□□□ -0.26
CRX-206ENST00000604324 SHANK3Q9BYB0 1731 aa13.45□□□□□ -0.26
CRX-206ENST00000604324 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
CRX-206ENST00000604324 MEGF6O75095 1541 aa13.44□□□□□ -0.26
CRX-206ENST00000604324 MORC1Q86VD1 984 aa13.44□□□□□ -0.26
CRX-206ENST00000604324 SBF2Q86WG5 1849 aa13.44□□□□□ -0.26
CRX-206ENST00000604324 RGPD1P0DJD0 1748 aa13.44□□□□□ -0.26
CRX-206ENST00000604324 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
CRX-206ENST00000604324 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
CRX-206ENST00000604324 OVOS2A0A0G2JMS6 1433 aa13.43□□□□□ -0.26
CRX-206ENST00000604324 A0A0G2JS52 829 aa13.42□□□□□ -0.26
CRX-206ENST00000604324 IL2RBP14784 551 aa13.42□□□□□ -0.26
CRX-206ENST00000604324 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
CRX-206ENST00000604324 MYT1Q01538 1121 aa13.42□□□□□ -0.26
CRX-206ENST00000604324 FAM182BQ5T319 152 aa13.42□□□□□ -0.26
CRX-206ENST00000604324 CCDC125Q86Z20 511 aa13.42□□□□□ -0.26
CRX-206ENST00000604324 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
CRX-206ENST00000604324 COL3A1P02461 1466 aaPredicted RBP13.42□□□□□ -0.26
CRX-206ENST00000604324 DDB1Q16531 1140 aa13.42□□□□□ -0.26
CRX-206ENST00000604324 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
CRX-206ENST00000604324 PKD1L3Q7Z443 1732 aa13.4□□□□□ -0.26
CRX-206ENST00000604324 CC2D1BQ5T0F9 858 aaKnown RBP13.4□□□□□ -0.26
CRX-206ENST00000604324 FAM196AQ6ZSG2 479 aa13.4□□□□□ -0.26
CRX-206ENST00000604324 PLEKHG2Q9H7P9 1386 aa13.39□□□□□ -0.27
CRX-206ENST00000604324 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
CRX-206ENST00000604324 PDE3BQ13370 1112 aa13.39□□□□□ -0.27
CRX-206ENST00000604324 USHBP1Q8N6Y0 703 aa13.39□□□□□ -0.27
CRX-206ENST00000604324 EYA1Q99502 592 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms