RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 VASH1Q7L8A9 365 aaPredicted RBP13.92□□□□□ -0.18
SGMS1-206ENST00000602565 PODXL2Q9NZ53 605 aa13.92□□□□□ -0.18
SGMS1-206ENST00000602565 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
SGMS1-206ENST00000602565 MAFBQ9Y5Q3 323 aaPredicted RBP13.91□□□□□ -0.18
SGMS1-206ENST00000602565 WNT7AO00755 349 aa13.9□□□□□ -0.18
SGMS1-206ENST00000602565 GIGYF1O75420 1035 aaPredicted RBP13.9□□□□□ -0.18
SGMS1-206ENST00000602565 ZNF598Q86UK7 904 aaKnown RBP13.9□□□□□ -0.19
SGMS1-206ENST00000602565 KCTD15Q96SI1 283 aaPredicted RBP13.9□□□□□ -0.19
SGMS1-206ENST00000602565 MAP4K5Q9Y4K4 846 aa13.9□□□□□ -0.19
SGMS1-206ENST00000602565 V9GY48 417 aaPredicted RBP13.9□□□□□ -0.19
SGMS1-206ENST00000602565 USP17L5A8MUK1 530 aa13.89□□□□□ -0.19
SGMS1-206ENST00000602565 RAB15P59190 212 aa13.89□□□□□ -0.19
SGMS1-206ENST00000602565 PLPP7Q8NBV4 271 aa13.89□□□□□ -0.19
SGMS1-206ENST00000602565 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
SGMS1-206ENST00000602565 PPP1R15AO75807 674 aaPredicted RBP13.88□□□□□ -0.19
SGMS1-206ENST00000602565 PBXIP1Q96AQ6 731 aa13.88□□□□□ -0.19
SGMS1-206ENST00000602565 MRGPRX2Q96LB1 330 aa13.88□□□□□ -0.19
SGMS1-206ENST00000602565 USP17L3A6NCW0 530 aa13.87□□□□□ -0.19
SGMS1-206ENST00000602565 USP17L4A6NCW7 530 aa13.87□□□□□ -0.19
SGMS1-206ENST00000602565 FOXC1Q12948 553 aa13.87□□□□□ -0.19
SGMS1-206ENST00000602565 MAP7D1Q3KQU3 841 aa13.87□□□□□ -0.19
SGMS1-206ENST00000602565 USP17L2Q6R6M4 530 aa13.87□□□□□ -0.19
SGMS1-206ENST00000602565 USP17L1Q7RTZ2 530 aa13.87□□□□□ -0.19
SGMS1-206ENST00000602565 SEPT12Q8IYM1 358 aa13.87□□□□□ -0.19
SGMS1-206ENST00000602565 PHTF2Q8N3S3 785 aa13.87□□□□□ -0.19
SGMS1-206ENST00000602565 DOLKQ9UPQ8 538 aa13.87□□□□□ -0.19
SGMS1-206ENST00000602565 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.86□□□□□ -0.19
SGMS1-206ENST00000602565 DEPDC4Q8N2C3 294 aa13.86□□□□□ -0.19
SGMS1-206ENST00000602565 ESPNB1AK53 854 aa13.85□□□□□ -0.19
SGMS1-206ENST00000602565 FSHRP23945 695 aa13.85□□□□□ -0.19
SGMS1-206ENST00000602565 CCDC125Q86Z20 511 aa13.85□□□□□ -0.19
SGMS1-206ENST00000602565 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
SGMS1-206ENST00000602565 CDK15Q96Q40 435 aa13.84□□□□□ -0.19
SGMS1-206ENST00000602565 SIAH2O43255 324 aa13.83□□□□□ -0.2
SGMS1-206ENST00000602565 LZTS3O60299 673 aaPredicted RBP13.83□□□□□ -0.2
SGMS1-206ENST00000602565 NCOA4Q13772 614 aa13.83□□□□□ -0.2
SGMS1-206ENST00000602565 EML3Q32P44 896 aa13.83□□□□□ -0.2
SGMS1-206ENST00000602565 PLEKHM2Q8IWE5 1019 aa13.83□□□□□ -0.2
SGMS1-206ENST00000602565 MPNDQ8N594 471 aa13.83□□□□□ -0.2
SGMS1-206ENST00000602565 PCDHB11Q9Y5F2 797 aa13.83□□□□□ -0.2
SGMS1-206ENST00000602565 OXLD1Q5BKU9 147 aa13.82□□□□□ -0.2
SGMS1-206ENST00000602565 INTS6LQ5JSJ4 861 aaKnown RBP13.82□□□□□ -0.2
SGMS1-206ENST00000602565 CCDC85AQ96PX6 553 aaPredicted RBP13.82□□□□□ -0.2
SGMS1-206ENST00000602565 VRTNQ9H8Y1 702 aa13.82□□□□□ -0.2
SGMS1-206ENST00000602565 ADH1CP00326 375 aa13.81□□□□□ -0.2
SGMS1-206ENST00000602565 RANGAP1P46060 587 aaPredicted RBP13.8□□□□□ -0.2
SGMS1-206ENST00000602565 CDCA8Q53HL2 280 aa13.8□□□□□ -0.2
SGMS1-206ENST00000602565 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
SGMS1-206ENST00000602565 ALDH1A1P00352 501 aa13.79□□□□□ -0.2
SGMS1-206ENST00000602565 DHX9Q08211 1270 aaKnown RBP13.79□□□□□ -0.2
SGMS1-206ENST00000602565 TRIM52Q96A61 297 aa13.79□□□□□ -0.2
SGMS1-206ENST00000602565 TSGA10IPQ3SY00 556 aa13.78□□□□□ -0.2
SGMS1-206ENST00000602565 TRAF7Q6Q0C0 670 aa13.78□□□□□ -0.2
SGMS1-206ENST00000602565 ESF1Q9H501 851 aaKnown RBP13.78□□□□□ -0.2
SGMS1-206ENST00000602565 PKD2L1Q9P0L9 805 aa13.78□□□□□ -0.2
SGMS1-206ENST00000602565 MKRN1Q9UHC7 482 aaKnown RBP13.78□□□□□ -0.2
SGMS1-206ENST00000602565 WASF2Q9Y6W5 498 aa13.78□□□□□ -0.2
SGMS1-206ENST00000602565 NR5A1Q13285 461 aa13.77□□□□□ -0.21
SGMS1-206ENST00000602565 SIRT1Q96EB6 747 aa13.77□□□□□ -0.21
SGMS1-206ENST00000602565 NOD1Q9Y239 953 aa13.77□□□□□ -0.21
SGMS1-206ENST00000602565 TTC24A2A3L6 582 aaPredicted RBP13.76□□□□□ -0.21
SGMS1-206ENST00000602565 ATP5J2-PTCD1G3V325 749 aa13.76□□□□□ -0.21
SGMS1-206ENST00000602565 ERVH48-1M5A8F1 160 aa13.76□□□□□ -0.21
SGMS1-206ENST00000602565 GRM5P41594 1212 aa13.76□□□□□ -0.21
SGMS1-206ENST00000602565 CCDC116Q8IYX3 515 aa13.76□□□□□ -0.21
SGMS1-206ENST00000602565 CYP4X1Q8N118 509 aa13.76□□□□□ -0.21
SGMS1-206ENST00000602565 SNIP1Q8TAD8 396 aaKnown RBP13.76□□□□□ -0.21
SGMS1-206ENST00000602565 TNFRSF10AO00220 468 aa13.75□□□□□ -0.21
SGMS1-206ENST00000602565 USP4Q13107 963 aa13.75□□□□□ -0.21
SGMS1-206ENST00000602565 MYCP01106 439 aaPredicted RBP13.74□□□□□ -0.21
SGMS1-206ENST00000602565 KANK4Q5T7N3 995 aaPredicted RBP13.74□□□□□ -0.21
SGMS1-206ENST00000602565 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
SGMS1-206ENST00000602565 CDCA7Q9BWT1 371 aaPredicted RBP13.74□□□□□ -0.21
SGMS1-206ENST00000602565 SRPK2P78362 688 aaKnown RBP13.73□□□□□ -0.21
SGMS1-206ENST00000602565 LARP1Q6PKG0 1096 aaKnown RBP13.73□□□□□ -0.21
SGMS1-206ENST00000602565 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
SGMS1-206ENST00000602565 RASA1P20936 1047 aa13.72□□□□□ -0.21
SGMS1-206ENST00000602565 GDF9O60383 454 aa13.71□□□□□ -0.21
SGMS1-206ENST00000602565 ATP1A2P50993 1020 aa13.71□□□□□ -0.21
SGMS1-206ENST00000602565 NNTQ13423 1086 aa13.71□□□□□ -0.21
SGMS1-206ENST00000602565 PPP1R26Q5T8A7 1209 aaPredicted RBP13.71□□□□□ -0.21
SGMS1-206ENST00000602565 RGS20O76081 388 aa13.7□□□□□ -0.22
SGMS1-206ENST00000602565 ATG7O95352 703 aa13.7□□□□□ -0.22
SGMS1-206ENST00000602565 TMPRSS4Q9NRS4 437 aa13.7□□□□□ -0.22
SGMS1-206ENST00000602565 PGPEP1Q9NXJ5 209 aa13.7□□□□□ -0.22
SGMS1-206ENST00000602565 PSME1Q06323 249 aa13.69□□□□□ -0.22
SGMS1-206ENST00000602565 RETREG2Q8NC44 543 aa13.69□□□□□ -0.22
SGMS1-206ENST00000602565 CYLDQ9NQC7 956 aa13.69□□□□□ -0.22
SGMS1-206ENST00000602565 EMILIN1Q9Y6C2 1016 aa13.69□□□□□ -0.22
SGMS1-206ENST00000602565 FAM196BA6NMK8 535 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L15C9J2P7 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L10C9JJH3 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L13C9JLJ4 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L12C9JPN9 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L11C9JVI0 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L21D6R901 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L18D6R9N7 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L22D6RA61 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L17D6RBQ6 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L19D6RCP7 530 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms