RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 AEBP2Q6ZN18 517 aaPredicted RBP34.8■■■■□ 3.16
SGMS1-206ENST00000602565 CHIC1Q5VXU3 224 aa34.48■■■■□ 3.11
SGMS1-206ENST00000602565 PHF23Q9BUL5 403 aaPredicted RBP30.31■■■□□ 2.44
SGMS1-206ENST00000602565 SENP3Q9H4L4 574 aaPredicted RBP29.57■■■□□ 2.32
SGMS1-206ENST00000602565 PLPPR3Q6T4P5 718 aa28.25■■■□□ 2.11
SGMS1-206ENST00000602565 FOXD1Q16676 465 aa27.32■■□□□ 1.96
SGMS1-206ENST00000602565 ADRA2BP18089 450 aa26.65■■□□□ 1.86
SGMS1-206ENST00000602565 PPP6R1Q9UPN7 881 aa26.6■■□□□ 1.85
SGMS1-206ENST00000602565 PIAS4Q8N2W9 510 aaPredicted RBP25.96■■□□□ 1.75
SGMS1-206ENST00000602565 MSH5O43196 834 aa25.25■■□□□ 1.63
SGMS1-206ENST00000602565 PPP4R3CPQ6ZMV5 832 aa24.92■■□□□ 1.58
SGMS1-206ENST00000602565 KCNA4P22459 653 aa24.84■■□□□ 1.57
SGMS1-206ENST00000602565 POTEDQ86YR6 584 aa24.79■■□□□ 1.56
SGMS1-206ENST00000602565 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
SGMS1-206ENST00000602565 NCBP3Q53F19 620 aaKnown RBP24.47■■□□□ 1.51
SGMS1-206ENST00000602565 CNKSR2Q8WXI2 1034 aa24.14■■□□□ 1.46
SGMS1-206ENST00000602565 MAPK8IP2Q13387 824 aaPredicted RBP24.03■■□□□ 1.44
SGMS1-206ENST00000602565 NPM3O75607 178 aaKnown RBP24.02■■□□□ 1.44
SGMS1-206ENST00000602565 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
SGMS1-206ENST00000602565 EHMT2Q96KQ7 1210 aa23.64■■□□□ 1.38
SGMS1-206ENST00000602565 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
SGMS1-206ENST00000602565 RNF216Q9NWF9 866 aaPredicted RBP23.54■■□□□ 1.36
SGMS1-206ENST00000602565 HOXD11P31277 338 aaPredicted RBP23.29■■□□□ 1.32
SGMS1-206ENST00000602565 DNAJC5BQ9UF47 199 aa23.18■■□□□ 1.3
SGMS1-206ENST00000602565 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
SGMS1-206ENST00000602565 ZBTB22O15209 634 aa22.81■■□□□ 1.24
SGMS1-206ENST00000602565 FOXD4L1Q9NU39 408 aa22.77■■□□□ 1.24
SGMS1-206ENST00000602565 DCAF8L1A6NGE4 600 aa22.72■■□□□ 1.23
SGMS1-206ENST00000602565 SLC4A2P04920 1241 aa22.54■■□□□ 1.2
SGMS1-206ENST00000602565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.31■■□□□ 1.16
SGMS1-206ENST00000602565 MYCNP04198 464 aaPredicted RBP22.25■■□□□ 1.15
SGMS1-206ENST00000602565 ATXN8OSP0DMR3 200 aa21.91■■□□□ 1.1
SGMS1-206ENST00000602565 U3KPZ7 1027 aaPredicted RBP21.91■■□□□ 1.1
SGMS1-206ENST00000602565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.89■■□□□ 1.1
SGMS1-206ENST00000602565 HNRNPUL2Q1KMD3 747 aaKnown RBP21.89■■□□□ 1.1
SGMS1-206ENST00000602565 SAMD1Q6SPF0 538 aaPredicted RBP21.8■■□□□ 1.08
SGMS1-206ENST00000602565 CACNB1Q02641 598 aaPredicted RBP21.74■■□□□ 1.07
SGMS1-206ENST00000602565 APLP2Q06481 763 aa21.58■■□□□ 1.05
SGMS1-206ENST00000602565 RNF39Q9H2S5 420 aa21.55■■□□□ 1.04
SGMS1-206ENST00000602565 ATF5Q9Y2D1 282 aaPredicted RBP21.53■■□□□ 1.04
SGMS1-206ENST00000602565 C1QBPQ07021 282 aaKnown RBP21.29■■□□□ 1
SGMS1-206ENST00000602565 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
SGMS1-206ENST00000602565 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
SGMS1-206ENST00000602565 CAPN15O75808 1086 aa21.16■□□□□ 0.98
SGMS1-206ENST00000602565 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
SGMS1-206ENST00000602565 FKBP8Q14318 412 aa20.91■□□□□ 0.94
SGMS1-206ENST00000602565 POLA2Q14181 598 aa20.87■□□□□ 0.93
SGMS1-206ENST00000602565 ABCB7O75027 752 aa20.78■□□□□ 0.92
SGMS1-206ENST00000602565 FBLN2P98095 1184 aa20.74■□□□□ 0.91
SGMS1-206ENST00000602565 ZBTB12Q9Y330 459 aaPredicted RBP20.62■□□□□ 0.89
SGMS1-206ENST00000602565 MKRN4PQ13434 485 aaPredicted RBP20.61■□□□□ 0.89
SGMS1-206ENST00000602565 DSG3P32926 999 aa20.6■□□□□ 0.89
SGMS1-206ENST00000602565 SPDYE4A6NLX3 237 aa20.46■□□□□ 0.87
SGMS1-206ENST00000602565 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
SGMS1-206ENST00000602565 FBXO3Q9UK99 471 aa20.08■□□□□ 0.81
SGMS1-206ENST00000602565 PROM2Q8N271 834 aa20.07■□□□□ 0.8
SGMS1-206ENST00000602565 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
SGMS1-206ENST00000602565 SPDYE2BA6NHP3 402 aa20.05■□□□□ 0.8
SGMS1-206ENST00000602565 SPDYE6P0CI01 402 aa20.05■□□□□ 0.8
SGMS1-206ENST00000602565 SPDYE2Q495Y8 402 aa20.05■□□□□ 0.8
SGMS1-206ENST00000602565 SSUH2Q9Y2M2 353 aa19.89■□□□□ 0.77
SGMS1-206ENST00000602565 AMER1Q5JTC6 1135 aaPredicted RBP19.85■□□□□ 0.77
SGMS1-206ENST00000602565 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
SGMS1-206ENST00000602565 VASPP50552 380 aaPredicted RBP19.75■□□□□ 0.75
SGMS1-206ENST00000602565 RTN4Q9NQC3 1192 aaKnown RBP19.75■□□□□ 0.75
SGMS1-206ENST00000602565 RBM42Q9BTD8 480 aaKnown RBP19.72■□□□□ 0.75
SGMS1-206ENST00000602565 STAG3Q9UJ98 1225 aa19.61■□□□□ 0.73
SGMS1-206ENST00000602565 AKT1S1Q96B36 256 aa19.52■□□□□ 0.72
SGMS1-206ENST00000602565 IFNLR1Q8IU57 520 aaPredicted RBP19.46■□□□□ 0.71
SGMS1-206ENST00000602565 PLCD3Q8N3E9 789 aa19.44■□□□□ 0.7
SGMS1-206ENST00000602565 POTEHQ6S545 545 aa19.42■□□□□ 0.7
SGMS1-206ENST00000602565 SPDYE1Q8NFV5 336 aaPredicted RBP19.39■□□□□ 0.69
SGMS1-206ENST00000602565 MIER1Q8N108 512 aa19.38■□□□□ 0.69
SGMS1-206ENST00000602565 KLHL34Q8N239 644 aa19.38■□□□□ 0.69
SGMS1-206ENST00000602565 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
SGMS1-206ENST00000602565 REM2Q8IYK8 340 aaPredicted RBP19.31■□□□□ 0.68
SGMS1-206ENST00000602565 CLEC11AQ9Y240 323 aa19.31■□□□□ 0.68
SGMS1-206ENST00000602565 SPOCK2Q92563 424 aa19.23■□□□□ 0.67
SGMS1-206ENST00000602565 ZBTB47Q9UFB7 747 aaPredicted RBP19.2■□□□□ 0.66
SGMS1-206ENST00000602565 PRR29P0C7W0 189 aa19.18■□□□□ 0.66
SGMS1-206ENST00000602565 PITPNM1O00562 1244 aa19.09■□□□□ 0.65
SGMS1-206ENST00000602565 PKD2Q13563 968 aa18.97■□□□□ 0.63
SGMS1-206ENST00000602565 CREBZFQ9NS37 354 aa18.96■□□□□ 0.63
SGMS1-206ENST00000602565 CIZ1Q9ULV3 898 aaPredicted RBP18.9■□□□□ 0.62
SGMS1-206ENST00000602565 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
SGMS1-206ENST00000602565 ECM2O94769 699 aaPredicted RBP18.87■□□□□ 0.61
SGMS1-206ENST00000602565 CHRDL2Q6WN34 429 aa18.84■□□□□ 0.61
SGMS1-206ENST00000602565 MNX1P50219 401 aaPredicted RBP18.76■□□□□ 0.59
SGMS1-206ENST00000602565 NPM1P06748 294 aaKnown RBP eCLIP18.75■□□□□ 0.59
SGMS1-206ENST00000602565 GSE1Q14687 1217 aa18.75■□□□□ 0.59
SGMS1-206ENST00000602565 NUBP1P53384 320 aa18.74■□□□□ 0.59
SGMS1-206ENST00000602565 CHADLQ6NUI6 762 aa18.73■□□□□ 0.59
SGMS1-206ENST00000602565 DCAF8Q5TAQ9 597 aa18.71■□□□□ 0.59
SGMS1-206ENST00000602565 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
SGMS1-206ENST00000602565 FAM212AQ96EL1 285 aa18.7■□□□□ 0.58
SGMS1-206ENST00000602565 PRKAR2AP13861 404 aaKnown RBP18.65■□□□□ 0.58
SGMS1-206ENST00000602565 FXR2P51116 673 aaKnown RBP eCLIP18.62■□□□□ 0.57
SGMS1-206ENST00000602565 RGL2O15211 777 aa18.61■□□□□ 0.57
SGMS1-206ENST00000602565 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
SGMS1-206ENST00000602565 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms