RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 ZBTB7BO15156 539 aaPredicted RBP12.29□□□□□ -0.44
HCG18-242ENST00000602319 ZSCAN23Q3MJ62 389 aa12.29□□□□□ -0.44
HCG18-242ENST00000602319 ABCC4O15439 1325 aa12.28□□□□□ -0.44
HCG18-242ENST00000602319 MTERF4Q7Z6M4 381 aaKnown RBP12.28□□□□□ -0.44
HCG18-242ENST00000602319 RPGRIP1LQ68CZ1 1315 aa12.28□□□□□ -0.44
HCG18-242ENST00000602319 MSNP26038 577 aaKnown RBP12.27□□□□□ -0.45
HCG18-242ENST00000602319 LNPKQ9C0E8 428 aa12.27□□□□□ -0.45
HCG18-242ENST00000602319 NUCB2P80303 420 aa12.27□□□□□ -0.45
HCG18-242ENST00000602319 RABEP1Q15276 862 aa12.27□□□□□ -0.45
HCG18-242ENST00000602319 DYNC1I1O14576 645 aa12.26□□□□□ -0.45
HCG18-242ENST00000602319 SMAP1Q8IYB5 467 aaPredicted RBP12.26□□□□□ -0.45
HCG18-242ENST00000602319 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
HCG18-242ENST00000602319 RBSNQ9H1K0 784 aa12.26□□□□□ -0.45
HCG18-242ENST00000602319 ZKSCAN5Q9Y2L8 839 aa12.26□□□□□ -0.45
HCG18-242ENST00000602319 A0A1W2PP64 1363 aa12.26□□□□□ -0.45
HCG18-242ENST00000602319 CDC45O75419 566 aa12.26□□□□□ -0.45
HCG18-242ENST00000602319 U2AF1L5P0DN76 240 aaPredicted RBP12.26□□□□□ -0.45
HCG18-242ENST00000602319 U2AF1Q01081 240 aaKnown RBP eCLIP12.26□□□□□ -0.45
HCG18-242ENST00000602319 CHMP4BQ9H444 224 aaKnown RBP12.26□□□□□ -0.45
HCG18-242ENST00000602319 NPATQ14207 1427 aa12.26□□□□□ -0.45
HCG18-242ENST00000602319 DDX49Q9Y6V7 483 aaKnown RBP12.26□□□□□ -0.45
HCG18-242ENST00000602319 CSPP1Q1MSJ5 1256 aa12.25□□□□□ -0.45
HCG18-242ENST00000602319 SIRT2Q8IXJ6 389 aa12.25□□□□□ -0.45
HCG18-242ENST00000602319 ANP32BQ92688 251 aaKnown RBP12.25□□□□□ -0.45
HCG18-242ENST00000602319 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
HCG18-242ENST00000602319 CWC22Q9HCG8 908 aaKnown RBP12.25□□□□□ -0.45
HCG18-242ENST00000602319 PTPRMP28827 1452 aa12.25□□□□□ -0.45
HCG18-242ENST00000602319 GSPT1P15170 499 aaKnown RBP12.24□□□□□ -0.45
HCG18-242ENST00000602319 AFAP1Q8N556 730 aa12.24□□□□□ -0.45
HCG18-242ENST00000602319 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
HCG18-242ENST00000602319 GPT2Q8TD30 523 aa12.24□□□□□ -0.45
HCG18-242ENST00000602319 EVC2Q86UK5 1308 aa12.24□□□□□ -0.45
HCG18-242ENST00000602319 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
HCG18-242ENST00000602319 TNNT2P45379 298 aaPredicted RBP12.23□□□□□ -0.45
HCG18-242ENST00000602319 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
HCG18-242ENST00000602319 ATP10DQ9P241 1426 aa12.22□□□□□ -0.45
HCG18-242ENST00000602319 SASS6Q6UVJ0 657 aa12.22□□□□□ -0.45
HCG18-242ENST00000602319 USP26Q9BXU7 913 aa12.22□□□□□ -0.45
HCG18-242ENST00000602319 ZDHHC9Q9Y397 364 aa12.22□□□□□ -0.45
HCG18-242ENST00000602319 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
HCG18-242ENST00000602319 UQCRHLA0A096LP55 91 aa12.21□□□□□ -0.45
HCG18-242ENST00000602319 UQCRHP07919 91 aa12.21□□□□□ -0.45
HCG18-242ENST00000602319 PRIM1P49642 420 aaKnown RBP12.21□□□□□ -0.45
HCG18-242ENST00000602319 CCDC39Q9UFE4 941 aa12.21□□□□□ -0.45
HCG18-242ENST00000602319 MAP2P11137 1827 aaKnown RBP12.21□□□□□ -0.46
HCG18-242ENST00000602319 MYO5BQ9ULV0 1848 aa12.21□□□□□ -0.46
HCG18-242ENST00000602319 UTP14CQ5TAP6 766 aaKnown RBP12.21□□□□□ -0.46
HCG18-242ENST00000602319 PLEKHM2Q8IWE5 1019 aa12.21□□□□□ -0.46
HCG18-242ENST00000602319 TRAK1Q9UPV9 953 aa12.21□□□□□ -0.46
HCG18-242ENST00000602319 R3HCC1Q9Y3T6 440 aaKnown RBP12.21□□□□□ -0.46
HCG18-242ENST00000602319 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.46
HCG18-242ENST00000602319 TTC22Q5TAA0 569 aa12.2□□□□□ -0.46
HCG18-242ENST00000602319 ANKRD45Q5TZF3 282 aa12.2□□□□□ -0.46
HCG18-242ENST00000602319 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
HCG18-242ENST00000602319 IL17RAQ96F46 866 aa12.2□□□□□ -0.46
HCG18-242ENST00000602319 ZNF853P0CG23 659 aa12.2□□□□□ -0.46
HCG18-242ENST00000602319 MCTP1Q6DN14 999 aa12.2□□□□□ -0.46
HCG18-242ENST00000602319 RGS12O14924 1447 aa12.2□□□□□ -0.46
HCG18-242ENST00000602319 KIF3BO15066 747 aa12.19□□□□□ -0.46
HCG18-242ENST00000602319 VAMP4O75379 141 aa12.19□□□□□ -0.46
HCG18-242ENST00000602319 GTF2F1P35269 517 aaKnown RBP eCLIP12.19□□□□□ -0.46
HCG18-242ENST00000602319 CPSF1Q10570 1443 aaKnown RBP12.19□□□□□ -0.46
HCG18-242ENST00000602319 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
HCG18-242ENST00000602319 PREX1Q8TCU6 1659 aa12.18□□□□□ -0.46
HCG18-242ENST00000602319 DCTPP1Q9H773 170 aa12.18□□□□□ -0.46
HCG18-242ENST00000602319 RBM10P98175 930 aaKnown RBP12.18□□□□□ -0.46
HCG18-242ENST00000602319 XPCQ01831 940 aaPredicted RBP12.18□□□□□ -0.46
HCG18-242ENST00000602319 PKP1Q13835 747 aa12.18□□□□□ -0.46
HCG18-242ENST00000602319 TMEM63CQ9P1W3 806 aa12.18□□□□□ -0.46
HCG18-242ENST00000602319 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
HCG18-242ENST00000602319 TMEM131LA2VDJ0 1609 aa12.18□□□□□ -0.46
HCG18-242ENST00000602319 FCHSD2O94868 740 aa12.17□□□□□ -0.46
HCG18-242ENST00000602319 MLH3Q9UHC1 1453 aa12.17□□□□□ -0.46
HCG18-242ENST00000602319 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
HCG18-242ENST00000602319 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
HCG18-242ENST00000602319 CDK12Q9NYV4 1490 aaPredicted RBP12.16□□□□□ -0.46
HCG18-242ENST00000602319 MYRIPQ8NFW9 859 aa12.16□□□□□ -0.46
HCG18-242ENST00000602319 ITSN1Q15811 1721 aa12.16□□□□□ -0.46
HCG18-242ENST00000602319 MON2Q7Z3U7 1717 aa12.16□□□□□ -0.46
HCG18-242ENST00000602319 CCDC94Q9BW85 323 aaPredicted RBP12.16□□□□□ -0.46
HCG18-242ENST00000602319 IFT57Q9NWB7 429 aa12.16□□□□□ -0.46
HCG18-242ENST00000602319 ATP7BP35670 1465 aa12.16□□□□□ -0.46
HCG18-242ENST00000602319 MBD3O95983 291 aa12.16□□□□□ -0.46
HCG18-242ENST00000602319 RIMBP3CA6NJZ7 1639 aa12.15□□□□□ -0.46
HCG18-242ENST00000602319 RIMBP3BA6NNM3 1639 aa12.15□□□□□ -0.46
HCG18-242ENST00000602319 RIMBP3Q9UFD9 1639 aa12.15□□□□□ -0.46
HCG18-242ENST00000602319 FYB1O15117 783 aa12.15□□□□□ -0.46
HCG18-242ENST00000602319 INTS3Q68E01 1043 aaKnown RBP12.15□□□□□ -0.46
HCG18-242ENST00000602319 DMTNQ08495 405 aa12.15□□□□□ -0.46
HCG18-242ENST00000602319 DLC1Q96QB1 1528 aa12.15□□□□□ -0.46
HCG18-242ENST00000602319 DIAPH1O60610 1272 aaKnown RBP12.14□□□□□ -0.47
HCG18-242ENST00000602319 FAM13BQ9NYF5 915 aa12.14□□□□□ -0.47
HCG18-242ENST00000602319 RBM27Q9P2N5 1060 aaKnown RBP12.14□□□□□ -0.47
HCG18-242ENST00000602319 CFAP65Q6ZU64 1925 aaKnown RBP12.14□□□□□ -0.47
HCG18-242ENST00000602319 YTHDC2Q9H6S0 1430 aaKnown RBP12.14□□□□□ -0.47
HCG18-242ENST00000602319 BRD1O95696 1058 aa12.14□□□□□ -0.47
HCG18-242ENST00000602319 CUL4AQ13619 759 aa12.14□□□□□ -0.47
HCG18-242ENST00000602319 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
HCG18-242ENST00000602319 CRYBG1Q9Y4K1 1723 aa12.14□□□□□ -0.47
HCG18-242ENST00000602319 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms