RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 YBX3P16989 372 aaKnown RBP eCLIP21.58■■□□□ 1.05
TRIM11-205ENST00000602308 TRAK1Q9UPV9 953 aa21.58■■□□□ 1.05
TRIM11-205ENST00000602308 GPBP1L1Q9HC44 474 aaPredicted RBP21.57■■□□□ 1.04
TRIM11-205ENST00000602308 USP19O94966 1318 aa21.56■■□□□ 1.04
TRIM11-205ENST00000602308 NUDT16Q96DE0 195 aaKnown RBP21.56■■□□□ 1.04
TRIM11-205ENST00000602308 ZNF827Q17R98 1081 aa21.55■■□□□ 1.04
TRIM11-205ENST00000602308 ABTB2Q8N961 1025 aa21.55■■□□□ 1.04
TRIM11-205ENST00000602308 GRIN3BO60391 1043 aa21.54■■□□□ 1.04
TRIM11-205ENST00000602308 GCP02774 474 aa21.54■■□□□ 1.04
TRIM11-205ENST00000602308 PAPPAQ13219 1627 aa21.52■■□□□ 1.04
TRIM11-205ENST00000602308 TOM1L2Q6ZVM7 507 aa21.52■■□□□ 1.04
TRIM11-205ENST00000602308 CAPN15O75808 1086 aa21.51■■□□□ 1.03
TRIM11-205ENST00000602308 ADGRB1O14514 1584 aa21.51■■□□□ 1.03
TRIM11-205ENST00000602308 ACEP12821 1306 aa21.51■■□□□ 1.03
TRIM11-205ENST00000602308 POLR3AO14802 1390 aaPredicted RBP21.5■■□□□ 1.03
TRIM11-205ENST00000602308 POLD1P28340 1107 aa21.5■■□□□ 1.03
TRIM11-205ENST00000602308 ZBTB7CA1YPR0 619 aa21.49■■□□□ 1.03
TRIM11-205ENST00000602308 ZNF526Q8TF50 670 aaPredicted RBP21.49■■□□□ 1.03
TRIM11-205ENST00000602308 COL13A1Q5TAT6 717 aaPredicted RBP21.48■■□□□ 1.03
TRIM11-205ENST00000602308 DNAJC5GQ8N7S2 189 aa21.48■■□□□ 1.03
TRIM11-205ENST00000602308 SLC16A10Q8TF71 515 aa21.48■■□□□ 1.03
TRIM11-205ENST00000602308 ITSN1Q15811 1721 aa21.47■■□□□ 1.03
TRIM11-205ENST00000602308 AKAP12Q02952 1782 aa21.47■■□□□ 1.03
TRIM11-205ENST00000602308 NLRP13Q86W25 1043 aa21.47■■□□□ 1.03
TRIM11-205ENST00000602308 CDCA7Q9BWT1 371 aaPredicted RBP21.47■■□□□ 1.03
TRIM11-205ENST00000602308 ADCY9O60503 1353 aa21.47■■□□□ 1.03
TRIM11-205ENST00000602308 LRRC4BQ9NT99 713 aa21.46■■□□□ 1.03
TRIM11-205ENST00000602308 PPARGC1BQ86YN6 1023 aaKnown RBP21.45■■□□□ 1.02
TRIM11-205ENST00000602308 TOPAZ1Q8N9V7 1692 aa21.44■■□□□ 1.02
TRIM11-205ENST00000602308 AKT1S1Q96B36 256 aa21.44■■□□□ 1.02
TRIM11-205ENST00000602308 AXIN2Q9Y2T1 843 aa21.44■■□□□ 1.02
TRIM11-205ENST00000602308 COL24A1Q17RW2 1714 aa21.43■■□□□ 1.02
TRIM11-205ENST00000602308 WNK3Q9BYP7 1800 aa21.43■■□□□ 1.02
TRIM11-205ENST00000602308 APLP1P51693 650 aa21.43■■□□□ 1.02
TRIM11-205ENST00000602308 ACSBG1Q96GR2 724 aa21.43■■□□□ 1.02
TRIM11-205ENST00000602308 WDR17Q8IZU2 1322 aa21.43■■□□□ 1.02
TRIM11-205ENST00000602308 PLEKHG3A1L390 1219 aa21.42■■□□□ 1.02
TRIM11-205ENST00000602308 EXOC5O00471 708 aa21.42■■□□□ 1.02
TRIM11-205ENST00000602308 PNPLA7Q6ZV29 1317 aa21.42■■□□□ 1.02
TRIM11-205ENST00000602308 KIF3CO14782 793 aa21.41■■□□□ 1.02
TRIM11-205ENST00000602308 CDK19Q9BWU1 502 aa21.41■■□□□ 1.02
TRIM11-205ENST00000602308 PRELPP51888 382 aa21.4■■□□□ 1.02
TRIM11-205ENST00000602308 MPHOSPH9Q99550 1183 aa21.4■■□□□ 1.02
TRIM11-205ENST00000602308 CCDC61Q9Y6R9 512 aa21.4■■□□□ 1.02
TRIM11-205ENST00000602308 NHSQ6T4R5 1651 aa21.39■■□□□ 1.01
TRIM11-205ENST00000602308 CARD10Q9BWT7 1032 aa21.37■■□□□ 1.01
TRIM11-205ENST00000602308 COL18A1P39060 1754 aa21.37■■□□□ 1.01
TRIM11-205ENST00000602308 USP6P35125 1406 aa21.36■■□□□ 1.01
TRIM11-205ENST00000602308 BRD4O60885 1362 aaPredicted RBP21.36■■□□□ 1.01
TRIM11-205ENST00000602308 TNS4Q8IZW8 715 aa21.34■■□□□ 1.01
TRIM11-205ENST00000602308 TNS2Q63HR2 1409 aa21.34■■□□□ 1.01
TRIM11-205ENST00000602308 QSER1Q2KHR3 1735 aa21.33■■□□□ 1.01
TRIM11-205ENST00000602308 NLRP6P59044 892 aa21.33■■□□□ 1.01
TRIM11-205ENST00000602308 ARHGEF28Q8N1W1 1705 aaKnown RBP21.32■■□□□ 1
TRIM11-205ENST00000602308 TFCP2L1Q9NZI6 479 aa21.32■■□□□ 1
TRIM11-205ENST00000602308 SLIT3O75094 1523 aa21.32■■□□□ 1
TRIM11-205ENST00000602308 SLC34A2O95436 690 aa21.31■■□□□ 1
TRIM11-205ENST00000602308 CSB-PGBD3P0DP91 1061 aa21.31■■□□□ 1
TRIM11-205ENST00000602308 BTAF1O14981 1849 aa21.31■■□□□ 1
TRIM11-205ENST00000602308 KCNQ4P56696 695 aa21.29■■□□□ 1
TRIM11-205ENST00000602308 SLC27A3Q5K4L6 730 aa21.28■■□□□ 1
TRIM11-205ENST00000602308 ARHGEF25Q86VW2 580 aa21.28■■□□□ 1
TRIM11-205ENST00000602308 TUBGCP6Q96RT7 1819 aa21.27■■□□□ 1
TRIM11-205ENST00000602308 JMYQ8N9B5 988 aa21.27■■□□□ 1
TRIM11-205ENST00000602308 CPSF1Q10570 1443 aaKnown RBP21.27■■□□□ 1
TRIM11-205ENST00000602308 CCDC7Q96M83 1385 aa21.26■□□□□ 0.99
TRIM11-205ENST00000602308 KLRG1Q96E93 195 aa21.26■□□□□ 0.99
TRIM11-205ENST00000602308 PPIP5K1Q6PFW1 1433 aa21.26■□□□□ 0.99
TRIM11-205ENST00000602308 PCNTO95613 3336 aa21.26■□□□□ 0.99
TRIM11-205ENST00000602308 TOMM70O94826 608 aa21.25■□□□□ 0.99
TRIM11-205ENST00000602308 KDM2AQ9Y2K7 1162 aa21.25■□□□□ 0.99
TRIM11-205ENST00000602308 CD2APQ9Y5K6 639 aa21.25■□□□□ 0.99
TRIM11-205ENST00000602308 TRPM1Q7Z4N2 1603 aa21.25■□□□□ 0.99
TRIM11-205ENST00000602308 ABCC6O95255 1503 aa21.24■□□□□ 0.99
TRIM11-205ENST00000602308 HTRA3P83110 453 aa21.24■□□□□ 0.99
TRIM11-205ENST00000602308 RGPD5Q99666 1765 aa21.23■□□□□ 0.99
TRIM11-205ENST00000602308 MSL1Q68DK7 614 aa21.23■□□□□ 0.99
TRIM11-205ENST00000602308 COL23A1Q86Y22 540 aaPredicted RBP21.23■□□□□ 0.99
TRIM11-205ENST00000602308 KAT6BQ8WYB5 2073 aa21.2■□□□□ 0.99
TRIM11-205ENST00000602308 MSH5O43196 834 aa21.2■□□□□ 0.98
TRIM11-205ENST00000602308 WWC3Q9ULE0 1092 aa21.2■□□□□ 0.98
TRIM11-205ENST00000602308 WDR90Q96KV7 1748 aa21.19■□□□□ 0.98
TRIM11-205ENST00000602308 SOX12O15370 315 aa21.18■□□□□ 0.98
TRIM11-205ENST00000602308 DCAF11Q8TEB1 546 aa21.18■□□□□ 0.98
TRIM11-205ENST00000602308 PIK3C2AO00443 1686 aa21.17■□□□□ 0.98
TRIM11-205ENST00000602308 IL2RBP14784 551 aa21.16■□□□□ 0.98
TRIM11-205ENST00000602308 SRPK2P78362 688 aaKnown RBP21.16■□□□□ 0.98
TRIM11-205ENST00000602308 CABP2Q9NPB3 220 aa21.16■□□□□ 0.98
TRIM11-205ENST00000602308 IGSF1Q8N6C5 1336 aa21.15■□□□□ 0.98
TRIM11-205ENST00000602308 CABP1Q9NZU7 370 aa21.15■□□□□ 0.98
TRIM11-205ENST00000602308 KCNH5Q8NCM2 988 aa21.14■□□□□ 0.97
TRIM11-205ENST00000602308 NMRK2Q9NPI5 230 aa21.13■□□□□ 0.97
TRIM11-205ENST00000602308 NLRP2Q9NX02 1062 aa21.12■□□□□ 0.97
TRIM11-205ENST00000602308 RBM46Q8TBY0 533 aaKnown RBP21.1■□□□□ 0.97
TRIM11-205ENST00000602308 CCNL1Q9UK58 526 aaPredicted RBP21.1■□□□□ 0.97
TRIM11-205ENST00000602308 ERBB3P21860 1342 aa21.09■□□□□ 0.97
TRIM11-205ENST00000602308 PRIM1P49642 420 aaKnown RBP21.09■□□□□ 0.97
TRIM11-205ENST00000602308 SYTL4Q96C24 671 aaPredicted RBP21.09■□□□□ 0.97
TRIM11-205ENST00000602308 LY75O60449 1722 aa21.08■□□□□ 0.97
TRIM11-205ENST00000602308 DDX54Q8TDD1 881 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms