RNA–Protein interactions for RNA: ENST00000602203.1

SYDE1-205, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 3

Gene SYDE1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-205ENST00000602203 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
SYDE1-205ENST00000602203 SPATA31A5Q5VU36 1347 aa22.53■■□□□ 1.2
SYDE1-205ENST00000602203 SPATA31A7Q8IWB4 1347 aa22.53■■□□□ 1.2
SYDE1-205ENST00000602203 GLI3P10071 1580 aa22.52■■□□□ 1.2
SYDE1-205ENST00000602203 COL18A1P39060 1754 aa22.52■■□□□ 1.2
SYDE1-205ENST00000602203 LMO7Q8WWI1 1683 aa22.52■■□□□ 1.2
SYDE1-205ENST00000602203 LTN1O94822 1766 aa22.51■■□□□ 1.19
SYDE1-205ENST00000602203 AMER1Q5JTC6 1135 aaPredicted RBP22.51■■□□□ 1.19
SYDE1-205ENST00000602203 ARHGEF25Q86VW2 580 aa22.51■■□□□ 1.19
SYDE1-205ENST00000602203 THRAP3Q9Y2W1 955 aaKnown RBP22.51■■□□□ 1.19
SYDE1-205ENST00000602203 FBLN1P23142 703 aa22.5■■□□□ 1.19
SYDE1-205ENST00000602203 NSD2O96028 1365 aa22.49■■□□□ 1.19
SYDE1-205ENST00000602203 CAMTA1Q9Y6Y1 1673 aa22.49■■□□□ 1.19
SYDE1-205ENST00000602203 ZBTB7CA1YPR0 619 aa22.48■■□□□ 1.19
SYDE1-205ENST00000602203 ZNF316A6NFI3 1004 aaPredicted RBP22.48■■□□□ 1.19
SYDE1-205ENST00000602203 CCDC125Q86Z20 511 aa22.48■■□□□ 1.19
SYDE1-205ENST00000602203 SEPT12Q8IYM1 358 aa22.48■■□□□ 1.19
SYDE1-205ENST00000602203 STRN4Q9NRL3 753 aa22.48■■□□□ 1.19
SYDE1-205ENST00000602203 SPATA31A1Q5TZJ5 1347 aa22.48■■□□□ 1.19
SYDE1-205ENST00000602203 A0A0G2JS52 829 aa22.47■■□□□ 1.19
SYDE1-205ENST00000602203 MYT1Q01538 1121 aa22.47■■□□□ 1.19
SYDE1-205ENST00000602203 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
SYDE1-205ENST00000602203 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
SYDE1-205ENST00000602203 BARGINQ6ZT62 677 aa22.46■■□□□ 1.19
SYDE1-205ENST00000602203 DDX10Q13206 875 aaKnown RBP22.45■■□□□ 1.18
SYDE1-205ENST00000602203 CRB1P82279 1406 aa22.45■■□□□ 1.18
SYDE1-205ENST00000602203 TCP11L2Q8N4U5 519 aa22.44■■□□□ 1.18
SYDE1-205ENST00000602203 AXIN2Q9Y2T1 843 aa22.44■■□□□ 1.18
SYDE1-205ENST00000602203 MAP2P11137 1827 aaKnown RBP22.43■■□□□ 1.18
SYDE1-205ENST00000602203 NPC1L1Q9UHC9 1359 aa22.43■■□□□ 1.18
SYDE1-205ENST00000602203 MAP3K19Q56UN5 1328 aa22.43■■□□□ 1.18
SYDE1-205ENST00000602203 FAM98CQ17RN3 349 aaKnown RBP22.43■■□□□ 1.18
SYDE1-205ENST00000602203 KRT27Q7Z3Y8 459 aa22.43■■□□□ 1.18
SYDE1-205ENST00000602203 RRS1Q15050 365 aaKnown RBP22.42■■□□□ 1.18
SYDE1-205ENST00000602203 CC2D1BQ5T0F9 858 aaKnown RBP22.42■■□□□ 1.18
SYDE1-205ENST00000602203 CDCA7Q9BWT1 371 aaPredicted RBP22.42■■□□□ 1.18
SYDE1-205ENST00000602203 WDR17Q8IZU2 1322 aa22.41■■□□□ 1.18
SYDE1-205ENST00000602203 MORC1Q86VD1 984 aa22.41■■□□□ 1.18
SYDE1-205ENST00000602203 BLMP54132 1417 aaPredicted RBP22.4■■□□□ 1.18
SYDE1-205ENST00000602203 PEAK1Q9H792 1746 aa22.4■■□□□ 1.18
SYDE1-205ENST00000602203 TNNT2P45379 298 aaPredicted RBP22.4■■□□□ 1.18
SYDE1-205ENST00000602203 LARP1Q6PKG0 1096 aaKnown RBP22.39■■□□□ 1.17
SYDE1-205ENST00000602203 TOM1L2Q6ZVM7 507 aa22.39■■□□□ 1.17
SYDE1-205ENST00000602203 IP6K1Q92551 441 aa22.39■■□□□ 1.17
SYDE1-205ENST00000602203 CSB-PGBD3P0DP91 1061 aa22.38■■□□□ 1.17
SYDE1-205ENST00000602203 RTL1A6NKG5 1358 aa22.38■■□□□ 1.17
SYDE1-205ENST00000602203 THSD7AQ9UPZ6 1657 aa22.37■■□□□ 1.17
SYDE1-205ENST00000602203 HOXC9P31274 260 aa22.37■■□□□ 1.17
SYDE1-205ENST00000602203 SF3B2Q13435 895 aaKnown RBP22.37■■□□□ 1.17
SYDE1-205ENST00000602203 CNGB1Q14028 1251 aaPredicted RBP22.37■■□□□ 1.17
SYDE1-205ENST00000602203 EMILIN1Q9Y6C2 1016 aa22.37■■□□□ 1.17
SYDE1-205ENST00000602203 AMPHP49418 695 aa22.36■■□□□ 1.17
SYDE1-205ENST00000602203 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
SYDE1-205ENST00000602203 POLKQ9UBT6 870 aa22.36■■□□□ 1.17
SYDE1-205ENST00000602203 KIF24Q5T7B8 1368 aa22.36■■□□□ 1.17
SYDE1-205ENST00000602203 CARD10Q9BWT7 1032 aa22.35■■□□□ 1.17
SYDE1-205ENST00000602203 PDE3BQ13370 1112 aa22.34■■□□□ 1.17
SYDE1-205ENST00000602203 ERBB3P21860 1342 aa22.33■■□□□ 1.17
SYDE1-205ENST00000602203 FLT4P35916 1363 aa22.33■■□□□ 1.17
SYDE1-205ENST00000602203 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
SYDE1-205ENST00000602203 HSP90AB2PQ58FF8 381 aa22.31■■□□□ 1.16
SYDE1-205ENST00000602203 FAM196AQ6ZSG2 479 aa22.31■■□□□ 1.16
SYDE1-205ENST00000602203 ANKRD24Q8TF21 1146 aa22.31■■□□□ 1.16
SYDE1-205ENST00000602203 INSRP06213 1382 aa22.3■■□□□ 1.16
SYDE1-205ENST00000602203 PPM1GO15355 546 aaPredicted RBP22.3■■□□□ 1.16
SYDE1-205ENST00000602203 LTV1Q96GA3 475 aaPredicted RBP22.29■■□□□ 1.16
SYDE1-205ENST00000602203 RGPD2P0DJD1 1756 aa22.29■■□□□ 1.16
SYDE1-205ENST00000602203 FAM208AQ9UK61 1670 aaKnown RBP22.28■■□□□ 1.16
SYDE1-205ENST00000602203 DDB1Q16531 1140 aa22.27■■□□□ 1.16
SYDE1-205ENST00000602203 PARP4Q9UKK3 1724 aaKnown RBP22.26■■□□□ 1.15
SYDE1-205ENST00000602203 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
SYDE1-205ENST00000602203 MTHFSP49914 203 aa22.25■■□□□ 1.15
SYDE1-205ENST00000602203 NLRP2Q9NX02 1062 aa22.25■■□□□ 1.15
SYDE1-205ENST00000602203 BAG6P46379 1132 aa22.24■■□□□ 1.15
SYDE1-205ENST00000602203 BRWD3Q6RI45 1802 aa22.24■■□□□ 1.15
SYDE1-205ENST00000602203 WNK3Q9BYP7 1800 aa22.24■■□□□ 1.15
SYDE1-205ENST00000602203 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
SYDE1-205ENST00000602203 PPP2R1AP30153 589 aa22.22■■□□□ 1.15
SYDE1-205ENST00000602203 EP400Q96L91 3159 aa22.22■■□□□ 1.15
SYDE1-205ENST00000602203 DISP2A7MBM2 1401 aa22.22■■□□□ 1.15
SYDE1-205ENST00000602203 IL2RBP14784 551 aa22.21■■□□□ 1.15
SYDE1-205ENST00000602203 EIF4A2Q14240 407 aaKnown RBP22.21■■□□□ 1.15
SYDE1-205ENST00000602203 BCL9O00512 1426 aa22.21■■□□□ 1.15
SYDE1-205ENST00000602203 EXOC5O00471 708 aa22.2■■□□□ 1.14
SYDE1-205ENST00000602203 NBPF6Q5VWK0 638 aa22.2■■□□□ 1.14
SYDE1-205ENST00000602203 NBPF4Q96M43 638 aa22.2■■□□□ 1.14
SYDE1-205ENST00000602203 DEFB132Q7Z7B7 95 aa22.19■■□□□ 1.14
SYDE1-205ENST00000602203 TNS2Q63HR2 1409 aa22.19■■□□□ 1.14
SYDE1-205ENST00000602203 RALBP1Q15311 655 aa22.18■■□□□ 1.14
SYDE1-205ENST00000602203 RGPD1P0DJD0 1748 aa22.17■■□□□ 1.14
SYDE1-205ENST00000602203 LRRC37A3O60309 1634 aa22.17■■□□□ 1.14
SYDE1-205ENST00000602203 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
SYDE1-205ENST00000602203 USHBP1Q8N6Y0 703 aa22.16■■□□□ 1.14
SYDE1-205ENST00000602203 EYA1Q99502 592 aa22.16■■□□□ 1.14
SYDE1-205ENST00000602203 NCAPD2Q15021 1401 aa22.15■■□□□ 1.14
SYDE1-205ENST00000602203 IL13P35225 146 aa22.15■■□□□ 1.14
SYDE1-205ENST00000602203 PRKRIP1Q9H875 184 aaPredicted RBP22.15■■□□□ 1.14
SYDE1-205ENST00000602203 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
SYDE1-205ENST00000602203 IGSF1Q8N6C5 1336 aa22.11■■□□□ 1.13
SYDE1-205ENST00000602203 DIAPH1O60610 1272 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms