RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 STRN4Q9NRL3 753 aa23.34■■□□□ 1.33
SNRPA-210ENST00000601393 AXIN2Q9Y2T1 843 aa23.34■■□□□ 1.33
SNRPA-210ENST00000601393 FYB1O15117 783 aa23.33■■□□□ 1.33
SNRPA-210ENST00000601393 SOX12O15370 315 aa23.33■■□□□ 1.33
SNRPA-210ENST00000601393 LARP1Q6PKG0 1096 aaKnown RBP23.33■■□□□ 1.33
SNRPA-210ENST00000601393 SEPT12Q8IYM1 358 aa23.33■■□□□ 1.33
SNRPA-210ENST00000601393 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
SNRPA-210ENST00000601393 PARP4Q9UKK3 1724 aaKnown RBP23.32■■□□□ 1.32
SNRPA-210ENST00000601393 CRB1P82279 1406 aa23.32■■□□□ 1.32
SNRPA-210ENST00000601393 FAM98CQ17RN3 349 aaKnown RBP23.31■■□□□ 1.32
SNRPA-210ENST00000601393 ZBTB7CA1YPR0 619 aa23.3■■□□□ 1.32
SNRPA-210ENST00000601393 EVA1CP58658 441 aa23.29■■□□□ 1.32
SNRPA-210ENST00000601393 COG3Q96JB2 828 aa23.29■■□□□ 1.32
SNRPA-210ENST00000601393 FAM208AQ9UK61 1670 aaKnown RBP23.28■■□□□ 1.32
SNRPA-210ENST00000601393 WDR17Q8IZU2 1322 aa23.28■■□□□ 1.32
SNRPA-210ENST00000601393 BARGINQ6ZT62 677 aa23.27■■□□□ 1.32
SNRPA-210ENST00000601393 GGNBP2Q9H3C7 697 aa23.27■■□□□ 1.32
SNRPA-210ENST00000601393 KIF7Q2M1P5 1343 aa23.27■■□□□ 1.32
SNRPA-210ENST00000601393 LRRC37A3O60309 1634 aa23.26■■□□□ 1.31
SNRPA-210ENST00000601393 BLMP54132 1417 aaPredicted RBP23.25■■□□□ 1.31
SNRPA-210ENST00000601393 PEAK1Q9H792 1746 aa23.25■■□□□ 1.31
SNRPA-210ENST00000601393 POLR3GLQ9BT43 218 aa23.25■■□□□ 1.31
SNRPA-210ENST00000601393 TCP11L2Q8N4U5 519 aa23.24■■□□□ 1.31
SNRPA-210ENST00000601393 THRAP3Q9Y2W1 955 aaKnown RBP23.24■■□□□ 1.31
SNRPA-210ENST00000601393 ERBB3P21860 1342 aa23.23■■□□□ 1.31
SNRPA-210ENST00000601393 MAP3K19Q56UN5 1328 aa23.23■■□□□ 1.31
SNRPA-210ENST00000601393 FBLN1P23142 703 aa23.22■■□□□ 1.31
SNRPA-210ENST00000601393 KRT27Q7Z3Y8 459 aa23.22■■□□□ 1.31
SNRPA-210ENST00000601393 USP35Q9P2H5 1018 aa23.22■■□□□ 1.31
SNRPA-210ENST00000601393 PANK3Q9H999 370 aa23.21■■□□□ 1.31
SNRPA-210ENST00000601393 RTL1A6NKG5 1358 aa23.21■■□□□ 1.31
SNRPA-210ENST00000601393 DISP2A7MBM2 1401 aa23.21■■□□□ 1.31
SNRPA-210ENST00000601393 RGPD2P0DJD1 1756 aa23.21■■□□□ 1.31
SNRPA-210ENST00000601393 MAP2P11137 1827 aaKnown RBP23.21■■□□□ 1.31
SNRPA-210ENST00000601393 CGNL1Q0VF96 1302 aa23.2■■□□□ 1.3
SNRPA-210ENST00000601393 IP6K1Q92551 441 aa23.2■■□□□ 1.3
SNRPA-210ENST00000601393 TOM1L2Q6ZVM7 507 aa23.19■■□□□ 1.3
SNRPA-210ENST00000601393 CARD10Q9BWT7 1032 aa23.19■■□□□ 1.3
SNRPA-210ENST00000601393 CCDC7Q96M83 1385 aa23.18■■□□□ 1.3
SNRPA-210ENST00000601393 A0A0G2JS52 829 aa23.18■■□□□ 1.3
SNRPA-210ENST00000601393 MYT1Q01538 1121 aa23.18■■□□□ 1.3
SNRPA-210ENST00000601393 TNS1Q9HBL0 1735 aaKnown RBP23.17■■□□□ 1.3
SNRPA-210ENST00000601393 HOXC9P31274 260 aa23.17■■□□□ 1.3
SNRPA-210ENST00000601393 RGPD1P0DJD0 1748 aa23.16■■□□□ 1.3
SNRPA-210ENST00000601393 KIF24Q5T7B8 1368 aa23.16■■□□□ 1.3
SNRPA-210ENST00000601393 RRS1Q15050 365 aaKnown RBP23.16■■□□□ 1.3
SNRPA-210ENST00000601393 ANKRD24Q8TF21 1146 aa23.16■■□□□ 1.3
SNRPA-210ENST00000601393 WASHC2AQ641Q2 1341 aa23.15■■□□□ 1.3
SNRPA-210ENST00000601393 NSD2O96028 1365 aa23.14■■□□□ 1.3
SNRPA-210ENST00000601393 CSB-PGBD3P0DP91 1061 aa23.14■■□□□ 1.29
SNRPA-210ENST00000601393 SBF2Q86WG5 1849 aa23.12■■□□□ 1.29
SNRPA-210ENST00000601393 FLT4P35916 1363 aa23.12■■□□□ 1.29
SNRPA-210ENST00000601393 AMPHP49418 695 aa23.11■■□□□ 1.29
SNRPA-210ENST00000601393 CCDC125Q86Z20 511 aa23.11■■□□□ 1.29
SNRPA-210ENST00000601393 INSRP06213 1382 aa23.11■■□□□ 1.29
SNRPA-210ENST00000601393 FAM182BQ5T319 152 aa23.1■■□□□ 1.29
SNRPA-210ENST00000601393 CDCA7Q9BWT1 371 aaPredicted RBP23.1■■□□□ 1.29
SNRPA-210ENST00000601393 TNS2Q63HR2 1409 aa23.08■■□□□ 1.29
SNRPA-210ENST00000601393 SMG6Q86US8 1419 aaKnown RBP23.08■■□□□ 1.29
SNRPA-210ENST00000601393 SHANK3Q9BYB0 1731 aa23.08■■□□□ 1.29
SNRPA-210ENST00000601393 PER1O15534 1290 aaPredicted RBP23.08■■□□□ 1.29
SNRPA-210ENST00000601393 AMER1Q5JTC6 1135 aaPredicted RBP23.08■■□□□ 1.29
SNRPA-210ENST00000601393 NLRP2Q9NX02 1062 aa23.08■■□□□ 1.29
SNRPA-210ENST00000601393 EMILIN1Q9Y6C2 1016 aa23.08■■□□□ 1.29
SNRPA-210ENST00000601393 PDE3BQ13370 1112 aa23.06■■□□□ 1.28
SNRPA-210ENST00000601393 DDB1Q16531 1140 aa23.06■■□□□ 1.28
SNRPA-210ENST00000601393 HSP90AB2PQ58FF8 381 aa23.06■■□□□ 1.28
SNRPA-210ENST00000601393 LTV1Q96GA3 475 aaPredicted RBP23.05■■□□□ 1.28
SNRPA-210ENST00000601393 POLKQ9UBT6 870 aa23.05■■□□□ 1.28
SNRPA-210ENST00000601393 OVOS2A0A0G2JMS6 1433 aa23.05■■□□□ 1.28
SNRPA-210ENST00000601393 BCL9O00512 1426 aa23.05■■□□□ 1.28
SNRPA-210ENST00000601393 NCAPD2Q15021 1401 aa23.05■■□□□ 1.28
SNRPA-210ENST00000601393 FAM196AQ6ZSG2 479 aa23.04■■□□□ 1.28
SNRPA-210ENST00000601393 KNSTRNQ9Y448 316 aa23.04■■□□□ 1.28
SNRPA-210ENST00000601393 MEGF6O75095 1541 aa23.02■■□□□ 1.28
SNRPA-210ENST00000601393 NPC1L1Q9UHC9 1359 aa23.01■■□□□ 1.27
SNRPA-210ENST00000601393 IL2RBP14784 551 aa23.01■■□□□ 1.27
SNRPA-210ENST00000601393 NBPF6Q5VWK0 638 aa23.01■■□□□ 1.27
SNRPA-210ENST00000601393 MARCH10Q8NA82 808 aaPredicted RBP23.01■■□□□ 1.27
SNRPA-210ENST00000601393 NBPF4Q96M43 638 aa23.01■■□□□ 1.27
SNRPA-210ENST00000601393 RGPD3A6NKT7 1758 aaPredicted RBP22.99■■□□□ 1.27
SNRPA-210ENST00000601393 RGPD4Q7Z3J3 1758 aa22.99■■□□□ 1.27
SNRPA-210ENST00000601393 NHSQ6T4R5 1651 aa22.98■■□□□ 1.27
SNRPA-210ENST00000601393 TNNT2P45379 298 aaPredicted RBP22.98■■□□□ 1.27
SNRPA-210ENST00000601393 DEFB132Q7Z7B7 95 aa22.98■■□□□ 1.27
SNRPA-210ENST00000601393 RREB1Q92766 1687 aa22.97■■□□□ 1.27
SNRPA-210ENST00000601393 PKD1L3Q7Z443 1732 aa22.97■■□□□ 1.27
SNRPA-210ENST00000601393 EXOC5O00471 708 aa22.97■■□□□ 1.27
SNRPA-210ENST00000601393 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
SNRPA-210ENST00000601393 TRIM37O94972 964 aa22.96■■□□□ 1.27
SNRPA-210ENST00000601393 PPM1GO15355 546 aaPredicted RBP22.94■■□□□ 1.26
SNRPA-210ENST00000601393 SF3B2Q13435 895 aaKnown RBP22.94■■□□□ 1.26
SNRPA-210ENST00000601393 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
SNRPA-210ENST00000601393 BAG6P46379 1132 aa22.92■■□□□ 1.26
SNRPA-210ENST00000601393 NUP188Q5SRE5 1749 aa22.91■■□□□ 1.26
SNRPA-210ENST00000601393 EIF4A2Q14240 407 aaKnown RBP22.91■■□□□ 1.26
SNRPA-210ENST00000601393 DOT1LQ8TEK3 1739 aa22.91■■□□□ 1.26
SNRPA-210ENST00000601393 EYA1Q99502 592 aa22.9■■□□□ 1.26
SNRPA-210ENST00000601393 CC2D1BQ5T0F9 858 aaKnown RBP22.89■■□□□ 1.25
SNRPA-210ENST00000601393 BTAF1O14981 1849 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms