RNA–Protein interactions for RNA: ENST00000601361.1

FARP1-234, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-234ENST00000601361 SBNO2Q9Y2G9 1366 aa12.81□□□□□ -0.36
FARP1-234ENST00000601361 SSH2Q76I76 1423 aa12.81□□□□□ -0.36
FARP1-234ENST00000601361 SOX12O15370 315 aa12.81□□□□□ -0.36
FARP1-234ENST00000601361 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
FARP1-234ENST00000601361 GOLGB1Q14789 3259 aaKnown RBP12.8□□□□□ -0.36
FARP1-234ENST00000601361 KCNQ2O43526 872 aa12.8□□□□□ -0.36
FARP1-234ENST00000601361 HDGFL2Q7Z4V5 671 aaPredicted RBP12.8□□□□□ -0.36
FARP1-234ENST00000601361 PCGF6Q9BYE7 350 aa12.8□□□□□ -0.36
FARP1-234ENST00000601361 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
FARP1-234ENST00000601361 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
FARP1-234ENST00000601361 SLIT3O75094 1523 aa12.79□□□□□ -0.36
FARP1-234ENST00000601361 PDE3BQ13370 1112 aa12.79□□□□□ -0.36
FARP1-234ENST00000601361 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
FARP1-234ENST00000601361 BARGINQ6ZT62 677 aa12.79□□□□□ -0.36
FARP1-234ENST00000601361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.79□□□□□ -0.36
FARP1-234ENST00000601361 KCNH5Q8NCM2 988 aa12.79□□□□□ -0.36
FARP1-234ENST00000601361 TCP11L2Q8N4U5 519 aa12.78□□□□□ -0.36
FARP1-234ENST00000601361 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
FARP1-234ENST00000601361 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
FARP1-234ENST00000601361 COL18A1P39060 1754 aa12.77□□□□□ -0.36
FARP1-234ENST00000601361 RGPD5Q99666 1765 aa12.77□□□□□ -0.36
FARP1-234ENST00000601361 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
FARP1-234ENST00000601361 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
FARP1-234ENST00000601361 TERF2IPQ9NYB0 399 aa12.77□□□□□ -0.37
FARP1-234ENST00000601361 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.37
FARP1-234ENST00000601361 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
FARP1-234ENST00000601361 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
FARP1-234ENST00000601361 CSB-PGBD3P0DP91 1061 aa12.76□□□□□ -0.37
FARP1-234ENST00000601361 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
FARP1-234ENST00000601361 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
FARP1-234ENST00000601361 THRAP3Q9Y2W1 955 aaKnown RBP12.76□□□□□ -0.37
FARP1-234ENST00000601361 AATKQ6ZMQ8 1374 aa12.76□□□□□ -0.37
FARP1-234ENST00000601361 CRB1P82279 1406 aa12.76□□□□□ -0.37
FARP1-234ENST00000601361 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
FARP1-234ENST00000601361 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
FARP1-234ENST00000601361 ANO8Q9HCE9 1232 aaPredicted RBP12.74□□□□□ -0.37
FARP1-234ENST00000601361 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
FARP1-234ENST00000601361 OVOS2A0A0J9YW53 1432 aa12.73□□□□□ -0.37
FARP1-234ENST00000601361 OVOS2Q6IE36 1432 aa12.73□□□□□ -0.37
FARP1-234ENST00000601361 USP47Q96K76 1375 aa12.73□□□□□ -0.37
FARP1-234ENST00000601361 NME9Q86XW9 330 aa12.73□□□□□ -0.37
FARP1-234ENST00000601361 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
FARP1-234ENST00000601361 EDC4Q6P2E9 1401 aaKnown RBP12.72□□□□□ -0.37
FARP1-234ENST00000601361 WDR17Q8IZU2 1322 aa12.72□□□□□ -0.37
FARP1-234ENST00000601361 QSER1Q2KHR3 1735 aa12.72□□□□□ -0.37
FARP1-234ENST00000601361 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
FARP1-234ENST00000601361 PTGER2P43116 358 aa12.72□□□□□ -0.37
FARP1-234ENST00000601361 TMF1P82094 1093 aa12.72□□□□□ -0.37
FARP1-234ENST00000601361 ARHGEF25Q86VW2 580 aa12.72□□□□□ -0.37
FARP1-234ENST00000601361 PUS7Q96PZ0 661 aaKnown RBP12.72□□□□□ -0.37
FARP1-234ENST00000601361 PDGFDQ9GZP0 370 aaPredicted RBP12.72□□□□□ -0.37
FARP1-234ENST00000601361 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
FARP1-234ENST00000601361 A0A1W2PP64 1363 aa12.71□□□□□ -0.37
FARP1-234ENST00000601361 TESK2Q96S53 571 aa12.71□□□□□ -0.37
FARP1-234ENST00000601361 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
FARP1-234ENST00000601361 NFAT5O94916 1531 aa12.71□□□□□ -0.38
FARP1-234ENST00000601361 NHSQ6T4R5 1651 aa12.7□□□□□ -0.38
FARP1-234ENST00000601361 TUBGCP6Q96RT7 1819 aa12.7□□□□□ -0.38
FARP1-234ENST00000601361 PLSCR1O15162 318 aa12.7□□□□□ -0.38
FARP1-234ENST00000601361 DDB1Q16531 1140 aa12.7□□□□□ -0.38
FARP1-234ENST00000601361 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
FARP1-234ENST00000601361 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
FARP1-234ENST00000601361 SHANK3Q9BYB0 1731 aa12.7□□□□□ -0.38
FARP1-234ENST00000601361 USP31Q70CQ4 1352 aa12.69□□□□□ -0.38
FARP1-234ENST00000601361 LTN1O94822 1766 aa12.69□□□□□ -0.38
FARP1-234ENST00000601361 CLSPNQ9HAW4 1339 aa12.69□□□□□ -0.38
FARP1-234ENST00000601361 SENP3-EIF4A1A0A087X0R7 540 aa12.69□□□□□ -0.38
FARP1-234ENST00000601361 CDCA8Q53HL2 280 aa12.69□□□□□ -0.38
FARP1-234ENST00000601361 CCER1Q8TC90 406 aaPredicted RBP12.69□□□□□ -0.38
FARP1-234ENST00000601361 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
FARP1-234ENST00000601361 BCL9O00512 1426 aa12.69□□□□□ -0.38
FARP1-234ENST00000601361 USP54Q70EL1 1684 aa12.68□□□□□ -0.38
FARP1-234ENST00000601361 BTAF1O14981 1849 aa12.68□□□□□ -0.38
FARP1-234ENST00000601361 C11orf95C9JLR9 678 aaPredicted RBP12.68□□□□□ -0.38
FARP1-234ENST00000601361 C1QTNF8P60827 252 aa12.68□□□□□ -0.38
FARP1-234ENST00000601361 COG3Q96JB2 828 aa12.68□□□□□ -0.38
FARP1-234ENST00000601361 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
FARP1-234ENST00000601361 CARD10Q9BWT7 1032 aa12.68□□□□□ -0.38
FARP1-234ENST00000601361 ABCC6O95255 1503 aa12.67□□□□□ -0.38
FARP1-234ENST00000601361 PTF1AQ7RTS3 328 aa12.67□□□□□ -0.38
FARP1-234ENST00000601361 PROM2Q8N271 834 aa12.67□□□□□ -0.38
FARP1-234ENST00000601361 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
FARP1-234ENST00000601361 CCDC7Q96M83 1385 aa12.67□□□□□ -0.38
FARP1-234ENST00000601361 SGIP1Q9BQI5 828 aa12.66□□□□□ -0.38
FARP1-234ENST00000601361 ANKRD36BQ8N2N9 1353 aa12.66□□□□□ -0.38
FARP1-234ENST00000601361 EXOC5O00471 708 aa12.65□□□□□ -0.38
FARP1-234ENST00000601361 ZBTB7AO95365 584 aa12.65□□□□□ -0.38
FARP1-234ENST00000601361 ANKRD24Q8TF21 1146 aa12.65□□□□□ -0.38
FARP1-234ENST00000601361 SYT17Q9BSW7 474 aa12.65□□□□□ -0.38
FARP1-234ENST00000601361 MAP3K5Q99683 1374 aa12.65□□□□□ -0.38
FARP1-234ENST00000601361 POLR3GLQ9BT43 218 aa12.64□□□□□ -0.39
FARP1-234ENST00000601361 FHDC1Q9C0D6 1143 aaPredicted RBP12.64□□□□□ -0.39
FARP1-234ENST00000601361 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
FARP1-234ENST00000601361 ERBB3P21860 1342 aa12.63□□□□□ -0.39
FARP1-234ENST00000601361 AMPHP49418 695 aa12.63□□□□□ -0.39
FARP1-234ENST00000601361 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
FARP1-234ENST00000601361 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
FARP1-234ENST00000601361 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
FARP1-234ENST00000601361 ATF5Q9Y2D1 282 aaPredicted RBP12.61□□□□□ -0.39
FARP1-234ENST00000601361 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms