RNA–Protein interactions for RNA: ENST00000600813.1

LINC01872-203, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-203ENST00000600813 EVA1CP58658 441 aa19.25■□□□□ 0.67
LINC01872-203ENST00000600813 COG3Q96JB2 828 aa19.24■□□□□ 0.67
LINC01872-203ENST00000600813 WASHC2AQ641Q2 1341 aa19.24■□□□□ 0.67
LINC01872-203ENST00000600813 SPATA31A1Q5TZJ5 1347 aa19.23■□□□□ 0.67
LINC01872-203ENST00000600813 FAM98CQ17RN3 349 aaKnown RBP19.22■□□□□ 0.67
LINC01872-203ENST00000600813 COL5A2P05997 1499 aaPredicted RBP19.22■□□□□ 0.67
LINC01872-203ENST00000600813 SEPT12Q8IYM1 358 aa19.21■□□□□ 0.67
LINC01872-203ENST00000600813 USP35Q9P2H5 1018 aa19.21■□□□□ 0.67
LINC01872-203ENST00000600813 CCDC7Q96M83 1385 aa19.2■□□□□ 0.66
LINC01872-203ENST00000600813 RRS1Q15050 365 aaKnown RBP19.19■□□□□ 0.66
LINC01872-203ENST00000600813 MAP3K19Q56UN5 1328 aa19.19■□□□□ 0.66
LINC01872-203ENST00000600813 RGPD5Q99666 1765 aa19.19■□□□□ 0.66
LINC01872-203ENST00000600813 PER1O15534 1290 aaPredicted RBP19.17■□□□□ 0.66
LINC01872-203ENST00000600813 IP6K1Q92551 441 aa19.16■□□□□ 0.66
LINC01872-203ENST00000600813 CGNL1Q0VF96 1302 aa19.16■□□□□ 0.66
LINC01872-203ENST00000600813 WDR17Q8IZU2 1322 aa19.15■□□□□ 0.66
LINC01872-203ENST00000600813 HOXC9P31274 260 aa19.14■□□□□ 0.65
LINC01872-203ENST00000600813 BARGINQ6ZT62 677 aa19.14■□□□□ 0.65
LINC01872-203ENST00000600813 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
LINC01872-203ENST00000600813 TCP11L2Q8N4U5 519 aa19.14■□□□□ 0.65
LINC01872-203ENST00000600813 UPF1Q92900 1129 aaKnown RBP eCLIP19.14■□□□□ 0.65
LINC01872-203ENST00000600813 CRB1P82279 1406 aa19.14■□□□□ 0.65
LINC01872-203ENST00000600813 LTN1O94822 1766 aa19.14■□□□□ 0.65
LINC01872-203ENST00000600813 KIF20BQ96Q89 1820 aa19.14■□□□□ 0.65
LINC01872-203ENST00000600813 AMER1Q5JTC6 1135 aaPredicted RBP19.13■□□□□ 0.65
LINC01872-203ENST00000600813 ANKRD24Q8TF21 1146 aa19.13■□□□□ 0.65
LINC01872-203ENST00000600813 BRWD3Q6RI45 1802 aa19.13■□□□□ 0.65
LINC01872-203ENST00000600813 ERBB3P21860 1342 aa19.12■□□□□ 0.65
LINC01872-203ENST00000600813 CSB-PGBD3P0DP91 1061 aa19.12■□□□□ 0.65
LINC01872-203ENST00000600813 AMPHP49418 695 aa19.12■□□□□ 0.65
LINC01872-203ENST00000600813 FAM182BQ5T319 152 aa19.12■□□□□ 0.65
LINC01872-203ENST00000600813 EMILIN1Q9Y6C2 1016 aa19.12■□□□□ 0.65
LINC01872-203ENST00000600813 A0A0G2JS52 829 aa19.11■□□□□ 0.65
LINC01872-203ENST00000600813 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
LINC01872-203ENST00000600813 MYT1Q01538 1121 aa19.11■□□□□ 0.65
LINC01872-203ENST00000600813 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
LINC01872-203ENST00000600813 CARD10Q9BWT7 1032 aa19.11■□□□□ 0.65
LINC01872-203ENST00000600813 KNSTRNQ9Y448 316 aa19.11■□□□□ 0.65
LINC01872-203ENST00000600813 HSP90AB2PQ58FF8 381 aa19.1■□□□□ 0.65
LINC01872-203ENST00000600813 KRT27Q7Z3Y8 459 aa19.1■□□□□ 0.65
LINC01872-203ENST00000600813 THRAP3Q9Y2W1 955 aaKnown RBP19.1■□□□□ 0.65
LINC01872-203ENST00000600813 THSD7AQ9UPZ6 1657 aa19.09■□□□□ 0.65
LINC01872-203ENST00000600813 POLKQ9UBT6 870 aa19.09■□□□□ 0.65
LINC01872-203ENST00000600813 NLRP2Q9NX02 1062 aa19.08■□□□□ 0.64
LINC01872-203ENST00000600813 ABCC6O95255 1503 aa19.08■□□□□ 0.64
LINC01872-203ENST00000600813 PEAK1Q9H792 1746 aa19.08■□□□□ 0.64
LINC01872-203ENST00000600813 EP400Q96L91 3159 aa19.07■□□□□ 0.64
LINC01872-203ENST00000600813 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
LINC01872-203ENST00000600813 PPM1GO15355 546 aaPredicted RBP19.05■□□□□ 0.64
LINC01872-203ENST00000600813 MORC1Q86VD1 984 aa19.05■□□□□ 0.64
LINC01872-203ENST00000600813 ZEB1P37275 1124 aaPredicted RBP19.04■□□□□ 0.64
LINC01872-203ENST00000600813 CC2D1BQ5T0F9 858 aaKnown RBP19.04■□□□□ 0.64
LINC01872-203ENST00000600813 NBPF6Q5VWK0 638 aa19.04■□□□□ 0.64
LINC01872-203ENST00000600813 NBPF4Q96M43 638 aa19.04■□□□□ 0.64
LINC01872-203ENST00000600813 DISP2A7MBM2 1401 aa19.03■□□□□ 0.64
LINC01872-203ENST00000600813 MAP2P11137 1827 aaKnown RBP19.03■□□□□ 0.64
LINC01872-203ENST00000600813 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
LINC01872-203ENST00000600813 RTL1A6NKG5 1358 aa19.03■□□□□ 0.64
LINC01872-203ENST00000600813 NSD2O96028 1365 aa19.03■□□□□ 0.64
LINC01872-203ENST00000600813 INSRP06213 1382 aa19.03■□□□□ 0.64
LINC01872-203ENST00000600813 FLT4P35916 1363 aa19.02■□□□□ 0.64
LINC01872-203ENST00000600813 ANKRD26Q9UPS8 1709 aa19.02■□□□□ 0.63
LINC01872-203ENST00000600813 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
LINC01872-203ENST00000600813 USHBP1Q8N6Y0 703 aa19■□□□□ 0.63
LINC01872-203ENST00000600813 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
LINC01872-203ENST00000600813 RGPD2P0DJD1 1756 aa19■□□□□ 0.63
LINC01872-203ENST00000600813 DDB1Q16531 1140 aa18.99■□□□□ 0.63
LINC01872-203ENST00000600813 MARCH10Q8NA82 808 aaPredicted RBP18.98■□□□□ 0.63
LINC01872-203ENST00000600813 PARP4Q9UKK3 1724 aaKnown RBP18.97■□□□□ 0.63
LINC01872-203ENST00000600813 EXOC5O00471 708 aa18.97■□□□□ 0.63
LINC01872-203ENST00000600813 IL2RBP14784 551 aa18.97■□□□□ 0.63
LINC01872-203ENST00000600813 CDCA7Q9BWT1 371 aaPredicted RBP18.97■□□□□ 0.63
LINC01872-203ENST00000600813 NPC1L1Q9UHC9 1359 aa18.96■□□□□ 0.63
LINC01872-203ENST00000600813 EIF4A2Q14240 407 aaKnown RBP18.96■□□□□ 0.63
LINC01872-203ENST00000600813 EYA1Q99502 592 aa18.95■□□□□ 0.62
LINC01872-203ENST00000600813 LRRC37A3O60309 1634 aa18.95■□□□□ 0.62
LINC01872-203ENST00000600813 WNK3Q9BYP7 1800 aa18.95■□□□□ 0.62
LINC01872-203ENST00000600813 FAM208AQ9UK61 1670 aaKnown RBP18.95■□□□□ 0.62
LINC01872-203ENST00000600813 SMG6Q86US8 1419 aaKnown RBP18.94■□□□□ 0.62
LINC01872-203ENST00000600813 MTHFSP49914 203 aa18.94■□□□□ 0.62
LINC01872-203ENST00000600813 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
LINC01872-203ENST00000600813 FAM196AQ6ZSG2 479 aa18.94■□□□□ 0.62
LINC01872-203ENST00000600813 PTF1AQ7RTS3 328 aa18.94■□□□□ 0.62
LINC01872-203ENST00000600813 DEFB132Q7Z7B7 95 aa18.94■□□□□ 0.62
LINC01872-203ENST00000600813 TRIM37O94972 964 aa18.93■□□□□ 0.62
LINC01872-203ENST00000600813 CCDC125Q86Z20 511 aa18.92■□□□□ 0.62
LINC01872-203ENST00000600813 MEGF6O75095 1541 aa18.91■□□□□ 0.62
LINC01872-203ENST00000600813 IL13P35225 146 aa18.89■□□□□ 0.61
LINC01872-203ENST00000600813 DDX54Q8TDD1 881 aaKnown RBP18.89■□□□□ 0.61
LINC01872-203ENST00000600813 TNS2Q63HR2 1409 aa18.89■□□□□ 0.61
LINC01872-203ENST00000600813 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
LINC01872-203ENST00000600813 NCAPD2Q15021 1401 aa18.88■□□□□ 0.61
LINC01872-203ENST00000600813 KCNQ2O43526 872 aa18.87■□□□□ 0.61
LINC01872-203ENST00000600813 OVOS2A0A0G2JMS6 1433 aa18.86■□□□□ 0.61
LINC01872-203ENST00000600813 IGSF1Q8N6C5 1336 aa18.86■□□□□ 0.61
LINC01872-203ENST00000600813 EN1Q05925 392 aaPredicted RBP18.86■□□□□ 0.61
LINC01872-203ENST00000600813 RAPGEF4Q8WZA2 1011 aa18.86■□□□□ 0.61
LINC01872-203ENST00000600813 TATP17735 454 aaPredicted RBP18.85■□□□□ 0.61
LINC01872-203ENST00000600813 PPP2R1AP30153 589 aa18.85■□□□□ 0.61
LINC01872-203ENST00000600813 AEBP1Q8IUX7 1158 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms