RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
COPE-210ENST00000600528 SYT17Q9BSW7 474 aa13.61□□□□□ -0.23
COPE-210ENST00000600528 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
COPE-210ENST00000600528 NLRP6P59044 892 aa13.6□□□□□ -0.23
COPE-210ENST00000600528 SLC15A2Q16348 729 aa13.6□□□□□ -0.23
COPE-210ENST00000600528 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
COPE-210ENST00000600528 SGIP1Q9BQI5 828 aa13.6□□□□□ -0.23
COPE-210ENST00000600528 AXIN2Q9Y2T1 843 aa13.6□□□□□ -0.23
COPE-210ENST00000600528 WDR17Q8IZU2 1322 aa13.6□□□□□ -0.23
COPE-210ENST00000600528 COL18A1P39060 1754 aa13.59□□□□□ -0.23
COPE-210ENST00000600528 USP6P35125 1406 aa13.58□□□□□ -0.24
COPE-210ENST00000600528 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.24
COPE-210ENST00000600528 NBPF1Q3BBV0 1214 aa13.58□□□□□ -0.24
COPE-210ENST00000600528 FHDC1Q9C0D6 1143 aaPredicted RBP13.58□□□□□ -0.24
COPE-210ENST00000600528 CABP2Q9NPB3 220 aa13.58□□□□□ -0.24
COPE-210ENST00000600528 STK32BQ9NY57 414 aa13.58□□□□□ -0.24
COPE-210ENST00000600528 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
COPE-210ENST00000600528 MYOM1P52179 1685 aa13.58□□□□□ -0.24
COPE-210ENST00000600528 KIAA1210Q9ULL0 1709 aa13.57□□□□□ -0.24
COPE-210ENST00000600528 ARHGEF25Q86VW2 580 aa13.57□□□□□ -0.24
COPE-210ENST00000600528 CARD10Q9BWT7 1032 aa13.57□□□□□ -0.24
COPE-210ENST00000600528 MTFR1LQ9H019 292 aa13.57□□□□□ -0.24
COPE-210ENST00000600528 CABP1Q9NZU7 370 aa13.57□□□□□ -0.24
COPE-210ENST00000600528 ZBTB7CA1YPR0 619 aa13.56□□□□□ -0.24
COPE-210ENST00000600528 CENPJQ9HC77 1338 aaPredicted RBP13.56□□□□□ -0.24
COPE-210ENST00000600528 EXOC5O00471 708 aa13.55□□□□□ -0.24
COPE-210ENST00000600528 C1QTNF8P60827 252 aa13.55□□□□□ -0.24
COPE-210ENST00000600528 MAP3K5Q99683 1374 aa13.55□□□□□ -0.24
COPE-210ENST00000600528 CPSF1Q10570 1443 aaKnown RBP13.54□□□□□ -0.24
COPE-210ENST00000600528 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
COPE-210ENST00000600528 KCNH5Q8NCM2 988 aa13.53□□□□□ -0.24
COPE-210ENST00000600528 SENP3-EIF4A1A0A087X0R7 540 aa13.52□□□□□ -0.25
COPE-210ENST00000600528 ARXQ96QS3 562 aa13.52□□□□□ -0.25
COPE-210ENST00000600528 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
COPE-210ENST00000600528 PCGF6Q9BYE7 350 aa13.52□□□□□ -0.25
COPE-210ENST00000600528 CCDC7Q96M83 1385 aa13.52□□□□□ -0.25
COPE-210ENST00000600528 PIK3C2AO00443 1686 aa13.52□□□□□ -0.25
COPE-210ENST00000600528 AKAP12Q02952 1782 aa13.51□□□□□ -0.25
COPE-210ENST00000600528 TTC21BQ7Z4L5 1316 aa13.51□□□□□ -0.25
COPE-210ENST00000600528 CHD4Q14839 1912 aa13.5□□□□□ -0.25
COPE-210ENST00000600528 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
COPE-210ENST00000600528 TTC21AQ8NDW8 1320 aa13.49□□□□□ -0.25
COPE-210ENST00000600528 CSB-PGBD3P0DP91 1061 aa13.49□□□□□ -0.25
COPE-210ENST00000600528 TRPM1Q7Z4N2 1603 aa13.49□□□□□ -0.25
COPE-210ENST00000600528 PAPPAQ13219 1627 aa13.48□□□□□ -0.25
COPE-210ENST00000600528 ABCC6O95255 1503 aa13.48□□□□□ -0.25
COPE-210ENST00000600528 NHSQ6T4R5 1651 aa13.47□□□□□ -0.25
COPE-210ENST00000600528 EVC2Q86UK5 1308 aa13.47□□□□□ -0.25
COPE-210ENST00000600528 SLC16A10Q8TF71 515 aa13.47□□□□□ -0.25
COPE-210ENST00000600528 NFAT5O94916 1531 aa13.47□□□□□ -0.25
COPE-210ENST00000600528 RGPD5Q99666 1765 aa13.46□□□□□ -0.25
COPE-210ENST00000600528 ZNF827Q17R98 1081 aa13.46□□□□□ -0.25
COPE-210ENST00000600528 IFFO2Q5TF58 517 aa13.46□□□□□ -0.25
COPE-210ENST00000600528 ACSBG1Q96GR2 724 aa13.46□□□□□ -0.25
COPE-210ENST00000600528 LRRC4BQ9NT99 713 aa13.46□□□□□ -0.25
COPE-210ENST00000600528 QRICH2Q9H0J4 1663 aa13.46□□□□□ -0.26
COPE-210ENST00000600528 GPR162Q16538 588 aa13.45□□□□□ -0.26
COPE-210ENST00000600528 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
COPE-210ENST00000600528 ERBB3P21860 1342 aa13.44□□□□□ -0.26
COPE-210ENST00000600528 SOX12O15370 315 aa13.44□□□□□ -0.26
COPE-210ENST00000600528 USP31Q70CQ4 1352 aa13.44□□□□□ -0.26
COPE-210ENST00000600528 IL2RBP14784 551 aa13.43□□□□□ -0.26
COPE-210ENST00000600528 GIGYF1O75420 1035 aaPredicted RBP13.42□□□□□ -0.26
COPE-210ENST00000600528 SLC27A3Q5K4L6 730 aa13.42□□□□□ -0.26
COPE-210ENST00000600528 COL24A1Q17RW2 1714 aa13.42□□□□□ -0.26
COPE-210ENST00000600528 NLRP2Q9NX02 1062 aa13.41□□□□□ -0.26
COPE-210ENST00000600528 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
COPE-210ENST00000600528 PNPLA7Q6ZV29 1317 aa13.4□□□□□ -0.26
COPE-210ENST00000600528 POLD1P28340 1107 aa13.4□□□□□ -0.26
COPE-210ENST00000600528 BTAF1O14981 1849 aa13.4□□□□□ -0.26
COPE-210ENST00000600528 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
COPE-210ENST00000600528 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
COPE-210ENST00000600528 USP54Q70EL1 1684 aa13.38□□□□□ -0.27
COPE-210ENST00000600528 NLGN2Q8NFZ4 835 aa13.38□□□□□ -0.27
COPE-210ENST00000600528 ANKRD24Q8TF21 1146 aa13.38□□□□□ -0.27
COPE-210ENST00000600528 L3MBTL2Q969R5 705 aa13.38□□□□□ -0.27
COPE-210ENST00000600528 SHANK3Q9BYB0 1731 aa13.37□□□□□ -0.27
COPE-210ENST00000600528 SBNO2Q9Y2G9 1366 aa13.36□□□□□ -0.27
COPE-210ENST00000600528 GRIN3BO60391 1043 aa13.36□□□□□ -0.27
COPE-210ENST00000600528 NME9Q86XW9 330 aa13.36□□□□□ -0.27
COPE-210ENST00000600528 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.36□□□□□ -0.27
COPE-210ENST00000600528 TFCP2L1Q9NZI6 479 aa13.36□□□□□ -0.27
COPE-210ENST00000600528 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
COPE-210ENST00000600528 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
COPE-210ENST00000600528 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
COPE-210ENST00000600528 CEP350Q5VT06 3117 aa13.35□□□□□ -0.27
COPE-210ENST00000600528 MON2Q7Z3U7 1717 aa13.35□□□□□ -0.27
COPE-210ENST00000600528 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
COPE-210ENST00000600528 DDX54Q8TDD1 881 aaKnown RBP13.34□□□□□ -0.27
COPE-210ENST00000600528 NSD2O96028 1365 aa13.33□□□□□ -0.27
COPE-210ENST00000600528 ANKRD36BQ8N2N9 1353 aa13.33□□□□□ -0.27
COPE-210ENST00000600528 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
COPE-210ENST00000600528 KCNQ4P56696 695 aa13.33□□□□□ -0.28
COPE-210ENST00000600528 IP6K1Q92551 441 aa13.33□□□□□ -0.28
COPE-210ENST00000600528 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
COPE-210ENST00000600528 LTN1O94822 1766 aa13.32□□□□□ -0.28
COPE-210ENST00000600528 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
COPE-210ENST00000600528 KAT6BQ8WYB5 2073 aa13.31□□□□□ -0.28
COPE-210ENST00000600528 LY75O60449 1722 aa13.3□□□□□ -0.28
COPE-210ENST00000600528 SLC12A5Q9H2X9 1139 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms