RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 EVA1CP58658 441 aa22.62■■□□□ 1.21
USHBP1-210ENST00000600286 CHRNA2Q15822 529 aa22.62■■□□□ 1.21
USHBP1-210ENST00000600286 UNC5CLQ8IV45 518 aa22.61■■□□□ 1.21
USHBP1-210ENST00000600286 GJD4Q96KN9 370 aaPredicted RBP22.61■■□□□ 1.21
USHBP1-210ENST00000600286 PPM1GO15355 546 aaPredicted RBP22.6■■□□□ 1.21
USHBP1-210ENST00000600286 AATKQ6ZMQ8 1374 aa22.6■■□□□ 1.21
USHBP1-210ENST00000600286 RRS1Q15050 365 aaKnown RBP22.59■■□□□ 1.21
USHBP1-210ENST00000600286 BTG4Q9NY30 223 aa22.59■■□□□ 1.21
USHBP1-210ENST00000600286 USP54Q70EL1 1684 aa22.58■■□□□ 1.21
USHBP1-210ENST00000600286 PHRF1Q9P1Y6 1649 aaKnown RBP22.58■■□□□ 1.21
USHBP1-210ENST00000600286 RALBP1Q15311 655 aa22.58■■□□□ 1.21
USHBP1-210ENST00000600286 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
USHBP1-210ENST00000600286 FBLN1P23142 703 aa22.57■■□□□ 1.2
USHBP1-210ENST00000600286 IP6K1Q92551 441 aa22.57■■□□□ 1.2
USHBP1-210ENST00000600286 COL14A1Q05707 1796 aaKnown RBP22.56■■□□□ 1.2
USHBP1-210ENST00000600286 KIF24Q5T7B8 1368 aa22.55■■□□□ 1.2
USHBP1-210ENST00000600286 POLKQ9UBT6 870 aa22.55■■□□□ 1.2
USHBP1-210ENST00000600286 NFAT5O94916 1531 aa22.55■■□□□ 1.2
USHBP1-210ENST00000600286 ANP32CO43423 234 aa22.54■■□□□ 1.2
USHBP1-210ENST00000600286 CSB-PGBD3P0DP91 1061 aa22.54■■□□□ 1.2
USHBP1-210ENST00000600286 STRN4Q9NRL3 753 aa22.54■■□□□ 1.2
USHBP1-210ENST00000600286 RTL1A6NKG5 1358 aa22.53■■□□□ 1.2
USHBP1-210ENST00000600286 HOXC9P31274 260 aa22.53■■□□□ 1.2
USHBP1-210ENST00000600286 CCDC9Q9Y3X0 531 aaKnown RBP22.53■■□□□ 1.2
USHBP1-210ENST00000600286 EMILIN1Q9Y6C2 1016 aa22.53■■□□□ 1.2
USHBP1-210ENST00000600286 ONECUT3O60422 494 aaPredicted RBP22.52■■□□□ 1.2
USHBP1-210ENST00000600286 VPS72Q15906 364 aa22.52■■□□□ 1.2
USHBP1-210ENST00000600286 FLT4P35916 1363 aa22.51■■□□□ 1.19
USHBP1-210ENST00000600286 CFAP53Q96M91 514 aa22.51■■□□□ 1.19
USHBP1-210ENST00000600286 ANKRD26Q9UPS8 1709 aa22.51■■□□□ 1.19
USHBP1-210ENST00000600286 MTHFSP49914 203 aa22.5■■□□□ 1.19
USHBP1-210ENST00000600286 AXIN2Q9Y2T1 843 aa22.5■■□□□ 1.19
USHBP1-210ENST00000600286 BLMP54132 1417 aaPredicted RBP22.49■■□□□ 1.19
USHBP1-210ENST00000600286 ANKRD24Q8TF21 1146 aa22.49■■□□□ 1.19
USHBP1-210ENST00000600286 LTV1Q96GA3 475 aaPredicted RBP22.49■■□□□ 1.19
USHBP1-210ENST00000600286 SMG6Q86US8 1419 aaKnown RBP22.48■■□□□ 1.19
USHBP1-210ENST00000600286 ABCC6O95255 1503 aa22.48■■□□□ 1.19
USHBP1-210ENST00000600286 PPP2R1AP30153 589 aa22.48■■□□□ 1.19
USHBP1-210ENST00000600286 TOM1L2Q6ZVM7 507 aa22.48■■□□□ 1.19
USHBP1-210ENST00000600286 PARD3Q8TEW0 1356 aa22.48■■□□□ 1.19
USHBP1-210ENST00000600286 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
USHBP1-210ENST00000600286 PRKRIP1Q9H875 184 aaPredicted RBP22.47■■□□□ 1.19
USHBP1-210ENST00000600286 INSRP06213 1382 aa22.47■■□□□ 1.19
USHBP1-210ENST00000600286 SRCAPQ6ZRS2 3230 aa22.47■■□□□ 1.19
USHBP1-210ENST00000600286 NLRP2Q9NX02 1062 aa22.45■■□□□ 1.18
USHBP1-210ENST00000600286 WDR17Q8IZU2 1322 aa22.45■■□□□ 1.18
USHBP1-210ENST00000600286 MYBBP1AQ9BQG0 1328 aaKnown RBP22.45■■□□□ 1.18
USHBP1-210ENST00000600286 LARP1Q6PKG0 1096 aaKnown RBP22.44■■□□□ 1.18
USHBP1-210ENST00000600286 THSD7AQ9UPZ6 1657 aa22.44■■□□□ 1.18
USHBP1-210ENST00000600286 CAMTA1Q9Y6Y1 1673 aa22.44■■□□□ 1.18
USHBP1-210ENST00000600286 ERBB3P21860 1342 aa22.43■■□□□ 1.18
USHBP1-210ENST00000600286 COL5A2P05997 1499 aaPredicted RBP22.42■■□□□ 1.18
USHBP1-210ENST00000600286 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
USHBP1-210ENST00000600286 LMO7Q8WWI1 1683 aa22.42■■□□□ 1.18
USHBP1-210ENST00000600286 LTN1O94822 1766 aa22.41■■□□□ 1.18
USHBP1-210ENST00000600286 CCDC125Q86Z20 511 aa22.41■■□□□ 1.18
USHBP1-210ENST00000600286 SEPT12Q8IYM1 358 aa22.41■■□□□ 1.18
USHBP1-210ENST00000600286 CARD10Q9BWT7 1032 aa22.41■■□□□ 1.18
USHBP1-210ENST00000600286 USP35Q9P2H5 1018 aa22.41■■□□□ 1.18
USHBP1-210ENST00000600286 NUDCQ9Y266 331 aa22.41■■□□□ 1.18
USHBP1-210ENST00000600286 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
USHBP1-210ENST00000600286 DIAPH1O60610 1272 aaKnown RBP22.4■■□□□ 1.18
USHBP1-210ENST00000600286 THRAP3Q9Y2W1 955 aaKnown RBP22.4■■□□□ 1.18
USHBP1-210ENST00000600286 CRB1P82279 1406 aa22.4■■□□□ 1.18
USHBP1-210ENST00000600286 SPATA31A5Q5VU36 1347 aa22.39■■□□□ 1.18
USHBP1-210ENST00000600286 SPATA31A7Q8IWB4 1347 aa22.39■■□□□ 1.18
USHBP1-210ENST00000600286 TCP11L2Q8N4U5 519 aa22.39■■□□□ 1.17
USHBP1-210ENST00000600286 EIF4A2Q14240 407 aaKnown RBP22.38■■□□□ 1.17
USHBP1-210ENST00000600286 COL18A1P39060 1754 aa22.38■■□□□ 1.17
USHBP1-210ENST00000600286 SPATA31A1Q5TZJ5 1347 aa22.37■■□□□ 1.17
USHBP1-210ENST00000600286 A0A0G2JS52 829 aa22.36■■□□□ 1.17
USHBP1-210ENST00000600286 MYT1Q01538 1121 aa22.36■■□□□ 1.17
USHBP1-210ENST00000600286 CDCA7Q9BWT1 371 aaPredicted RBP22.36■■□□□ 1.17
USHBP1-210ENST00000600286 U2SURPO15042 1029 aaKnown RBP22.33■■□□□ 1.17
USHBP1-210ENST00000600286 IL13P35225 146 aa22.33■■□□□ 1.17
USHBP1-210ENST00000600286 FAM98CQ17RN3 349 aaKnown RBP22.33■■□□□ 1.17
USHBP1-210ENST00000600286 NBPF6Q5VWK0 638 aa22.33■■□□□ 1.17
USHBP1-210ENST00000600286 BARGINQ6ZT62 677 aa22.33■■□□□ 1.17
USHBP1-210ENST00000600286 NBPF4Q96M43 638 aa22.33■■□□□ 1.17
USHBP1-210ENST00000600286 PEAK1Q9H792 1746 aa22.32■■□□□ 1.16
USHBP1-210ENST00000600286 KRT27Q7Z3Y8 459 aa22.32■■□□□ 1.16
USHBP1-210ENST00000600286 RAPGEF4Q8WZA2 1011 aa22.32■■□□□ 1.16
USHBP1-210ENST00000600286 EYA1Q99502 592 aa22.32■■□□□ 1.16
USHBP1-210ENST00000600286 IL2RBP14784 551 aa22.3■■□□□ 1.16
USHBP1-210ENST00000600286 TATP17735 454 aaPredicted RBP22.3■■□□□ 1.16
USHBP1-210ENST00000600286 TNS1Q9HBL0 1735 aaKnown RBP22.3■■□□□ 1.16
USHBP1-210ENST00000600286 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
USHBP1-210ENST00000600286 USHBP1Q8N6Y0 703 aa22.29■■□□□ 1.16
USHBP1-210ENST00000600286 RGPD5Q99666 1765 aa22.29■■□□□ 1.16
USHBP1-210ENST00000600286 EXOC5O00471 708 aa22.27■■□□□ 1.16
USHBP1-210ENST00000600286 U2AF1L5P0DN76 240 aaPredicted RBP22.27■■□□□ 1.16
USHBP1-210ENST00000600286 U2AF1Q01081 240 aaKnown RBP eCLIP22.27■■□□□ 1.16
USHBP1-210ENST00000600286 WDR43Q15061 677 aaKnown RBP eCLIP22.27■■□□□ 1.16
USHBP1-210ENST00000600286 SULT6B1Q6IMI4 303 aa22.27■■□□□ 1.16
USHBP1-210ENST00000600286 PNNQ9H307 717 aaKnown RBP22.27■■□□□ 1.16
USHBP1-210ENST00000600286 IGSF1Q8N6C5 1336 aa22.27■■□□□ 1.16
USHBP1-210ENST00000600286 NEFMP07197 916 aa22.26■■□□□ 1.15
USHBP1-210ENST00000600286 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
USHBP1-210ENST00000600286 PDE3BQ13370 1112 aa22.25■■□□□ 1.15
USHBP1-210ENST00000600286 DDB1Q16531 1140 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms