RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 CPDO75976 1380 aa27.93■■■□□ 2.06
COPE-208ENST00000598969 ZBTB7CA1YPR0 619 aa27.93■■■□□ 2.06
COPE-208ENST00000598969 EIF4A2Q14240 407 aaKnown RBP27.91■■■□□ 2.06
COPE-208ENST00000598969 KIAA0232Q92628 1395 aa27.91■■■□□ 2.06
COPE-208ENST00000598969 NUDCQ9Y266 331 aa27.9■■■□□ 2.06
COPE-208ENST00000598969 HAP1P54257 671 aaPredicted RBP27.89■■■□□ 2.06
COPE-208ENST00000598969 COL18A1P39060 1754 aa27.89■■■□□ 2.05
COPE-208ENST00000598969 HSPA1LP34931 641 aa27.88■■■□□ 2.05
COPE-208ENST00000598969 AXIN2Q9Y2T1 843 aa27.88■■■□□ 2.05
COPE-208ENST00000598969 U2SURPO15042 1029 aaKnown RBP27.86■■■□□ 2.05
COPE-208ENST00000598969 U2AF1L5P0DN76 240 aaPredicted RBP27.86■■■□□ 2.05
COPE-208ENST00000598969 U2AF1Q01081 240 aaKnown RBP eCLIP27.86■■■□□ 2.05
COPE-208ENST00000598969 CHRNA2Q15822 529 aa27.86■■■□□ 2.05
COPE-208ENST00000598969 JCADQ9P266 1359 aa27.86■■■□□ 2.05
COPE-208ENST00000598969 ABCC6O95255 1503 aa27.85■■■□□ 2.05
COPE-208ENST00000598969 BLMP54132 1417 aaPredicted RBP27.85■■■□□ 2.05
COPE-208ENST00000598969 PRDM11Q9NQV5 511 aa27.83■■■□□ 2.05
COPE-208ENST00000598969 RGPD5Q99666 1765 aa27.83■■■□□ 2.05
COPE-208ENST00000598969 RGPD1P0DJD0 1748 aa27.83■■■□□ 2.05
COPE-208ENST00000598969 LTV1Q96GA3 475 aaPredicted RBP27.82■■■□□ 2.04
COPE-208ENST00000598969 LMO7Q8WWI1 1683 aa27.81■■■□□ 2.04
COPE-208ENST00000598969 HNRNPUQ00839 825 aaKnown RBP eCLIP27.81■■■□□ 2.04
COPE-208ENST00000598969 FAM83GA6ND36 823 aa27.8■■■□□ 2.04
COPE-208ENST00000598969 ANKRD24Q8TF21 1146 aa27.78■■■□□ 2.04
COPE-208ENST00000598969 EYA1Q99502 592 aa27.78■■■□□ 2.04
COPE-208ENST00000598969 CCDC146Q8IYE0 955 aa27.78■■■□□ 2.04
COPE-208ENST00000598969 ERBB3P21860 1342 aa27.77■■■□□ 2.04
COPE-208ENST00000598969 IGSF1Q8N6C5 1336 aa27.77■■■□□ 2.04
COPE-208ENST00000598969 CAMTA1Q9Y6Y1 1673 aa27.77■■■□□ 2.04
COPE-208ENST00000598969 HMOX1P09601 288 aa27.76■■■□□ 2.03
COPE-208ENST00000598969 RSPH6AQ9H0K4 717 aa27.76■■■□□ 2.03
COPE-208ENST00000598969 NUTM2BA6NNL0 878 aaPredicted RBP27.76■■■□□ 2.03
COPE-208ENST00000598969 NUTM2EB1AL46 878 aaPredicted RBP27.76■■■□□ 2.03
COPE-208ENST00000598969 NUTM2AQ8IVF1 878 aaPredicted RBP27.76■■■□□ 2.03
COPE-208ENST00000598969 FCHSD2O94868 740 aa27.75■■■□□ 2.03
COPE-208ENST00000598969 AEBP1Q8IUX7 1158 aa27.74■■■□□ 2.03
COPE-208ENST00000598969 PLEKHF1Q96S99 279 aa27.74■■■□□ 2.03
COPE-208ENST00000598969 NBPF6Q5VWK0 638 aa27.73■■■□□ 2.03
COPE-208ENST00000598969 SULT6B1Q6IMI4 303 aa27.73■■■□□ 2.03
COPE-208ENST00000598969 NBPF4Q96M43 638 aa27.73■■■□□ 2.03
COPE-208ENST00000598969 COL14A1Q05707 1796 aaKnown RBP27.73■■■□□ 2.03
COPE-208ENST00000598969 RGPD2P0DJD1 1756 aa27.73■■■□□ 2.03
COPE-208ENST00000598969 ADAMTS2O95450 1211 aa27.73■■■□□ 2.03
COPE-208ENST00000598969 RUNDC1Q96C34 613 aa27.73■■■□□ 2.03
COPE-208ENST00000598969 SPATA31A6Q5VVP1 1343 aa27.72■■■□□ 2.03
COPE-208ENST00000598969 SENP3-EIF4A1A0A087X0R7 540 aa27.72■■■□□ 2.03
COPE-208ENST00000598969 KDRP35968 1356 aa27.72■■■□□ 2.03
COPE-208ENST00000598969 COL5A2P05997 1499 aaPredicted RBP27.71■■■□□ 2.03
COPE-208ENST00000598969 PRKAR2BP31323 418 aa27.71■■■□□ 2.03
COPE-208ENST00000598969 NCAPD2Q15021 1401 aa27.69■■■□□ 2.02
COPE-208ENST00000598969 LRP6O75581 1613 aa27.68■■■□□ 2.02
COPE-208ENST00000598969 USHBP1Q8N6Y0 703 aa27.68■■■□□ 2.02
COPE-208ENST00000598969 PNNQ9H307 717 aaKnown RBP27.68■■■□□ 2.02
COPE-208ENST00000598969 APAF1O14727 1248 aa27.67■■■□□ 2.02
COPE-208ENST00000598969 BTG4Q9NY30 223 aa27.67■■■□□ 2.02
COPE-208ENST00000598969 FAM208AQ9UK61 1670 aaKnown RBP27.66■■■□□ 2.02
COPE-208ENST00000598969 WDR17Q8IZU2 1322 aa27.66■■■□□ 2.02
COPE-208ENST00000598969 CSB-PGBD3P0DP91 1061 aa27.65■■■□□ 2.02
COPE-208ENST00000598969 PLCH1Q4KWH8 1693 aa27.65■■■□□ 2.02
COPE-208ENST00000598969 TCP11L2Q8N4U5 519 aa27.65■■■□□ 2.02
COPE-208ENST00000598969 FBXO41Q8TF61 875 aa27.65■■■□□ 2.02
COPE-208ENST00000598969 PHACTR3Q96KR7 559 aa27.65■■■□□ 2.02
COPE-208ENST00000598969 NLRP2Q9NX02 1062 aa27.64■■■□□ 2.02
COPE-208ENST00000598969 ZBED9Q6R2W3 1325 aa27.63■■■□□ 2.01
COPE-208ENST00000598969 STRN4Q9NRL3 753 aa27.63■■■□□ 2.01
COPE-208ENST00000598969 MAPK8IP3Q9UPT6 1336 aa27.62■■■□□ 2.01
COPE-208ENST00000598969 EVA1CP58658 441 aa27.61■■■□□ 2.01
COPE-208ENST00000598969 SALL2Q9Y467 1007 aaPredicted RBP27.61■■■□□ 2.01
COPE-208ENST00000598969 SLIT2O94813 1529 aa27.61■■■□□ 2.01
COPE-208ENST00000598969 LARP1Q6PKG0 1096 aaKnown RBP27.6■■■□□ 2.01
COPE-208ENST00000598969 NRAPQ86VF7 1730 aa27.59■■■□□ 2.01
COPE-208ENST00000598969 RRP7AQ9Y3A4 280 aaKnown RBP27.59■■■□□ 2.01
COPE-208ENST00000598969 TOM1L2Q6ZVM7 507 aa27.58■■■□□ 2.01
COPE-208ENST00000598969 NWD2Q9ULI1 1742 aa27.58■■■□□ 2.01
COPE-208ENST00000598969 TMPOP42166 694 aaKnown RBP27.58■■■□□ 2
COPE-208ENST00000598969 NEFMP07197 916 aa27.57■■■□□ 2
COPE-208ENST00000598969 C8orf37Q96NL8 207 aa27.57■■■□□ 2
COPE-208ENST00000598969 CARD10Q9BWT7 1032 aa27.56■■■□□ 2
COPE-208ENST00000598969 CRB1P82279 1406 aa27.56■■■□□ 2
COPE-208ENST00000598969 NEUROD2Q15784 382 aa27.55■■■□□ 2
COPE-208ENST00000598969 NFE2L2Q16236 605 aa27.55■■■□□ 2
COPE-208ENST00000598969 NGEFQ8N5V2 710 aa27.54■■■□□ 2
COPE-208ENST00000598969 NGLY1Q96IV0 654 aa27.54■■■□□ 2
COPE-208ENST00000598969 NCBP3Q53F19 620 aaKnown RBP27.53■■■□□ 2
COPE-208ENST00000598969 FNBP4Q8N3X1 1017 aaPredicted RBP27.53■■■□□ 2
COPE-208ENST00000598969 ZNF521Q96K83 1311 aa27.52■■■□□ 2
COPE-208ENST00000598969 MTHFSDQ2M296 383 aaKnown RBP27.52■■■□□ 2
COPE-208ENST00000598969 PHF23Q9BUL5 403 aaPredicted RBP27.52■■■□□ 2
COPE-208ENST00000598969 BCL9LQ86UU0 1499 aa27.51■■□□□ 1.99
COPE-208ENST00000598969 MEGF6O75095 1541 aa27.51■■□□□ 1.99
COPE-208ENST00000598969 RIPK4P57078 832 aa27.5■■□□□ 1.99
COPE-208ENST00000598969 MEX3CQ5U5Q3 659 aaKnown RBP27.5■■□□□ 1.99
COPE-208ENST00000598969 CCDC27Q2M243 656 aa27.5■■□□□ 1.99
COPE-208ENST00000598969 TRIM35Q9UPQ4 493 aa27.5■■□□□ 1.99
COPE-208ENST00000598969 UNC5CLQ8IV45 518 aa27.49■■□□□ 1.99
COPE-208ENST00000598969 RAPGEF4Q8WZA2 1011 aa27.49■■□□□ 1.99
COPE-208ENST00000598969 WWC1Q8IX03 1113 aa27.48■■□□□ 1.99
COPE-208ENST00000598969 DLG5Q8TDM6 1919 aa27.48■■□□□ 1.99
COPE-208ENST00000598969 TATP17735 454 aaPredicted RBP27.47■■□□□ 1.99
COPE-208ENST00000598969 GAS2L2Q8NHY3 880 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms