RNA–Protein interactions for RNA: ENST00000598926.5

TMEM143-209, Transcript of transmembrane protein 143, humanhuman

TSL 5

Gene TMEM143, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-209ENST00000598926 CCDC9Q9Y3X0 531 aaKnown RBP25.48■■□□□ 1.67
TMEM143-209ENST00000598926 SPATA31A5Q5VU36 1347 aa25.47■■□□□ 1.67
TMEM143-209ENST00000598926 SPATA31A7Q8IWB4 1347 aa25.47■■□□□ 1.67
TMEM143-209ENST00000598926 FYB1O15117 783 aa25.47■■□□□ 1.67
TMEM143-209ENST00000598926 STRN4Q9NRL3 753 aa25.47■■□□□ 1.67
TMEM143-209ENST00000598926 FAM208AQ9UK61 1670 aaKnown RBP25.47■■□□□ 1.67
TMEM143-209ENST00000598926 CCDC7Q96M83 1385 aa25.45■■□□□ 1.67
TMEM143-209ENST00000598926 CGNL1Q0VF96 1302 aa25.45■■□□□ 1.66
TMEM143-209ENST00000598926 GGNBP2Q9H3C7 697 aa25.45■■□□□ 1.66
TMEM143-209ENST00000598926 SPATA31A1Q5TZJ5 1347 aa25.43■■□□□ 1.66
TMEM143-209ENST00000598926 CRB1P82279 1406 aa25.43■■□□□ 1.66
TMEM143-209ENST00000598926 EVA1CP58658 441 aa25.42■■□□□ 1.66
TMEM143-209ENST00000598926 PANK3Q9H999 370 aa25.42■■□□□ 1.66
TMEM143-209ENST00000598926 MAP2P11137 1827 aaKnown RBP25.42■■□□□ 1.66
TMEM143-209ENST00000598926 PEAK1Q9H792 1746 aa25.41■■□□□ 1.66
TMEM143-209ENST00000598926 PARP4Q9UKK3 1724 aaKnown RBP25.41■■□□□ 1.66
TMEM143-209ENST00000598926 BLMP54132 1417 aaPredicted RBP25.41■■□□□ 1.66
TMEM143-209ENST00000598926 LARP1Q6PKG0 1096 aaKnown RBP25.41■■□□□ 1.66
TMEM143-209ENST00000598926 WASHC2AQ641Q2 1341 aa25.4■■□□□ 1.66
TMEM143-209ENST00000598926 AXIN2Q9Y2T1 843 aa25.4■■□□□ 1.66
TMEM143-209ENST00000598926 RTL1A6NKG5 1358 aa25.39■■□□□ 1.65
TMEM143-209ENST00000598926 NSD2O96028 1365 aa25.39■■□□□ 1.65
TMEM143-209ENST00000598926 WDR17Q8IZU2 1322 aa25.38■■□□□ 1.65
TMEM143-209ENST00000598926 ONECUT3O60422 494 aaPredicted RBP25.38■■□□□ 1.65
TMEM143-209ENST00000598926 FAM98CQ17RN3 349 aaKnown RBP25.37■■□□□ 1.65
TMEM143-209ENST00000598926 LRRC37A3O60309 1634 aa25.37■■□□□ 1.65
TMEM143-209ENST00000598926 MAP3K19Q56UN5 1328 aa25.37■■□□□ 1.65
TMEM143-209ENST00000598926 SEPT12Q8IYM1 358 aa25.36■■□□□ 1.65
TMEM143-209ENST00000598926 RGPD2P0DJD1 1756 aa25.36■■□□□ 1.65
TMEM143-209ENST00000598926 ERBB3P21860 1342 aa25.35■■□□□ 1.65
TMEM143-209ENST00000598926 TCP11L2Q8N4U5 519 aa25.34■■□□□ 1.65
TMEM143-209ENST00000598926 BARGINQ6ZT62 677 aa25.33■■□□□ 1.65
TMEM143-209ENST00000598926 USP35Q9P2H5 1018 aa25.33■■□□□ 1.65
TMEM143-209ENST00000598926 KIF24Q5T7B8 1368 aa25.32■■□□□ 1.64
TMEM143-209ENST00000598926 A0A0G2JS52 829 aa25.32■■□□□ 1.64
TMEM143-209ENST00000598926 MYT1Q01538 1121 aa25.32■■□□□ 1.64
TMEM143-209ENST00000598926 TOM1L2Q6ZVM7 507 aa25.32■■□□□ 1.64
TMEM143-209ENST00000598926 IP6K1Q92551 441 aa25.32■■□□□ 1.64
TMEM143-209ENST00000598926 THRAP3Q9Y2W1 955 aaKnown RBP25.32■■□□□ 1.64
TMEM143-209ENST00000598926 CSB-PGBD3P0DP91 1061 aa25.31■■□□□ 1.64
TMEM143-209ENST00000598926 FBLN1P23142 703 aa25.31■■□□□ 1.64
TMEM143-209ENST00000598926 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
TMEM143-209ENST00000598926 RRS1Q15050 365 aaKnown RBP25.3■■□□□ 1.64
TMEM143-209ENST00000598926 KNSTRNQ9Y448 316 aa25.3■■□□□ 1.64
TMEM143-209ENST00000598926 FLT4P35916 1363 aa25.3■■□□□ 1.64
TMEM143-209ENST00000598926 HOXC9P31274 260 aa25.29■■□□□ 1.64
TMEM143-209ENST00000598926 AMPHP49418 695 aa25.29■■□□□ 1.64
TMEM143-209ENST00000598926 ANKRD24Q8TF21 1146 aa25.28■■□□□ 1.64
TMEM143-209ENST00000598926 CARD10Q9BWT7 1032 aa25.28■■□□□ 1.64
TMEM143-209ENST00000598926 DISP2A7MBM2 1401 aa25.28■■□□□ 1.64
TMEM143-209ENST00000598926 AMER1Q5JTC6 1135 aaPredicted RBP25.26■■□□□ 1.63
TMEM143-209ENST00000598926 KRT27Q7Z3Y8 459 aa25.26■■□□□ 1.63
TMEM143-209ENST00000598926 SMG6Q86US8 1419 aaKnown RBP25.26■■□□□ 1.63
TMEM143-209ENST00000598926 INSRP06213 1382 aa25.24■■□□□ 1.63
TMEM143-209ENST00000598926 RGPD1P0DJD0 1748 aa25.23■■□□□ 1.63
TMEM143-209ENST00000598926 UPF1Q92900 1129 aaKnown RBP eCLIP25.23■■□□□ 1.63
TMEM143-209ENST00000598926 PER1O15534 1290 aaPredicted RBP25.22■■□□□ 1.63
TMEM143-209ENST00000598926 NLRP2Q9NX02 1062 aa25.22■■□□□ 1.63
TMEM143-209ENST00000598926 EMILIN1Q9Y6C2 1016 aa25.22■■□□□ 1.63
TMEM143-209ENST00000598926 NPC1L1Q9UHC9 1359 aa25.21■■□□□ 1.63
TMEM143-209ENST00000598926 CDCA7Q9BWT1 371 aaPredicted RBP25.21■■□□□ 1.63
TMEM143-209ENST00000598926 TNS1Q9HBL0 1735 aaKnown RBP25.2■■□□□ 1.63
TMEM143-209ENST00000598926 LTV1Q96GA3 475 aaPredicted RBP25.2■■□□□ 1.62
TMEM143-209ENST00000598926 TNS2Q63HR2 1409 aa25.2■■□□□ 1.62
TMEM143-209ENST00000598926 SBF2Q86WG5 1849 aa25.19■■□□□ 1.62
TMEM143-209ENST00000598926 MORC1Q86VD1 984 aa25.19■■□□□ 1.62
TMEM143-209ENST00000598926 TNNT2P45379 298 aaPredicted RBP25.18■■□□□ 1.62
TMEM143-209ENST00000598926 HSP90AB2PQ58FF8 381 aa25.18■■□□□ 1.62
TMEM143-209ENST00000598926 SHANK3Q9BYB0 1731 aa25.17■■□□□ 1.62
TMEM143-209ENST00000598926 POLKQ9UBT6 870 aa25.17■■□□□ 1.62
TMEM143-209ENST00000598926 PPM1GO15355 546 aaPredicted RBP25.14■■□□□ 1.62
TMEM143-209ENST00000598926 PDE3BQ13370 1112 aa25.14■■□□□ 1.62
TMEM143-209ENST00000598926 OVOS2A0A0G2JMS6 1433 aa25.13■■□□□ 1.61
TMEM143-209ENST00000598926 NCAPD2Q15021 1401 aa25.13■■□□□ 1.61
TMEM143-209ENST00000598926 DDB1Q16531 1140 aa25.13■■□□□ 1.61
TMEM143-209ENST00000598926 MEGF6O75095 1541 aa25.12■■□□□ 1.61
TMEM143-209ENST00000598926 IL2RBP14784 551 aa25.12■■□□□ 1.61
TMEM143-209ENST00000598926 CC2D1BQ5T0F9 858 aaKnown RBP25.12■■□□□ 1.61
TMEM143-209ENST00000598926 FAM182BQ5T319 152 aa25.11■■□□□ 1.61
TMEM143-209ENST00000598926 PKD1L3Q7Z443 1732 aa25.11■■□□□ 1.61
TMEM143-209ENST00000598926 CCDC125Q86Z20 511 aa25.09■■□□□ 1.61
TMEM143-209ENST00000598926 KAT6BQ8WYB5 2073 aa25.08■■□□□ 1.61
TMEM143-209ENST00000598926 NBPF6Q5VWK0 638 aa25.08■■□□□ 1.61
TMEM143-209ENST00000598926 FAM196AQ6ZSG2 479 aa25.08■■□□□ 1.61
TMEM143-209ENST00000598926 NBPF4Q96M43 638 aa25.08■■□□□ 1.61
TMEM143-209ENST00000598926 BCL9O00512 1426 aa25.07■■□□□ 1.6
TMEM143-209ENST00000598926 NHSQ6T4R5 1651 aa25.06■■□□□ 1.6
TMEM143-209ENST00000598926 USHBP1Q8N6Y0 703 aa25.05■■□□□ 1.6
TMEM143-209ENST00000598926 EXOC5O00471 708 aa25.04■■□□□ 1.6
TMEM143-209ENST00000598926 EIF4A2Q14240 407 aaKnown RBP25.04■■□□□ 1.6
TMEM143-209ENST00000598926 RGPD3A6NKT7 1758 aaPredicted RBP25.03■■□□□ 1.6
TMEM143-209ENST00000598926 RGPD4Q7Z3J3 1758 aa25.03■■□□□ 1.6
TMEM143-209ENST00000598926 MARCH10Q8NA82 808 aaPredicted RBP25.03■■□□□ 1.6
TMEM143-209ENST00000598926 DOT1LQ8TEK3 1739 aa25.02■■□□□ 1.6
TMEM143-209ENST00000598926 COL3A1P02461 1466 aaPredicted RBP25.01■■□□□ 1.59
TMEM143-209ENST00000598926 SF3B2Q13435 895 aaKnown RBP25■■□□□ 1.59
TMEM143-209ENST00000598926 RAPGEF4Q8WZA2 1011 aa25■■□□□ 1.59
TMEM143-209ENST00000598926 CNGB1Q14028 1251 aaPredicted RBP24.99■■□□□ 1.59
TMEM143-209ENST00000598926 IGSF1Q8N6C5 1336 aa24.99■■□□□ 1.59
TMEM143-209ENST00000598926 EYA1Q99502 592 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms