RNA–Protein interactions for RNA: ENST00000595455.1

LIN37-209, Transcript of lin-37 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN37, Length 1,635 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN37-209ENST00000595455 LTV1Q96GA3 475 aaPredicted RBP22.38■■□□□ 1.17
LIN37-209ENST00000595455 COL18A1P39060 1754 aa22.37■■□□□ 1.17
LIN37-209ENST00000595455 HOXC9P31274 260 aa22.37■■□□□ 1.17
LIN37-209ENST00000595455 C8orf37Q96NL8 207 aa22.36■■□□□ 1.17
LIN37-209ENST00000595455 CPDO75976 1380 aa22.35■■□□□ 1.17
LIN37-209ENST00000595455 MEX3CQ5U5Q3 659 aaKnown RBP22.35■■□□□ 1.17
LIN37-209ENST00000595455 IP6K1Q92551 441 aa22.35■■□□□ 1.17
LIN37-209ENST00000595455 CAMTA1Q9Y6Y1 1673 aa22.33■■□□□ 1.17
LIN37-209ENST00000595455 CENPBP07199 599 aaPredicted RBP22.32■■□□□ 1.16
LIN37-209ENST00000595455 NGLY1Q96IV0 654 aa22.32■■□□□ 1.16
LIN37-209ENST00000595455 BTG4Q9NY30 223 aa22.32■■□□□ 1.16
LIN37-209ENST00000595455 RGPD2P0DJD1 1756 aa22.31■■□□□ 1.16
LIN37-209ENST00000595455 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
LIN37-209ENST00000595455 PLCH1Q4KWH8 1693 aa22.31■■□□□ 1.16
LIN37-209ENST00000595455 LMO7Q8WWI1 1683 aa22.31■■□□□ 1.16
LIN37-209ENST00000595455 FLT4P35916 1363 aa22.31■■□□□ 1.16
LIN37-209ENST00000595455 STRN4Q9NRL3 753 aa22.31■■□□□ 1.16
LIN37-209ENST00000595455 COL14A1Q05707 1796 aaKnown RBP22.3■■□□□ 1.16
LIN37-209ENST00000595455 EIF4A2Q14240 407 aaKnown RBP22.29■■□□□ 1.16
LIN37-209ENST00000595455 ANKRD24Q8TF21 1146 aa22.28■■□□□ 1.16
LIN37-209ENST00000595455 MRS2Q9HD23 443 aa22.28■■□□□ 1.16
LIN37-209ENST00000595455 CDK12Q9NYV4 1490 aaPredicted RBP22.28■■□□□ 1.16
LIN37-209ENST00000595455 COL3A1P02461 1466 aaPredicted RBP22.27■■□□□ 1.16
LIN37-209ENST00000595455 INSRP06213 1382 aa22.27■■□□□ 1.16
LIN37-209ENST00000595455 RTL1A6NKG5 1358 aa22.26■■□□□ 1.15
LIN37-209ENST00000595455 EVA1CP58658 441 aa22.26■■□□□ 1.15
LIN37-209ENST00000595455 USHBP1Q8N6Y0 703 aa22.26■■□□□ 1.15
LIN37-209ENST00000595455 CFAP53Q96M91 514 aa22.26■■□□□ 1.15
LIN37-209ENST00000595455 IL13P35225 146 aa22.25■■□□□ 1.15
LIN37-209ENST00000595455 LARP1Q6PKG0 1096 aaKnown RBP22.25■■□□□ 1.15
LIN37-209ENST00000595455 DIAPH1O60610 1272 aaKnown RBP22.24■■□□□ 1.15
LIN37-209ENST00000595455 CSB-PGBD3P0DP91 1061 aa22.24■■□□□ 1.15
LIN37-209ENST00000595455 AFF2P51816 1311 aa22.24■■□□□ 1.15
LIN37-209ENST00000595455 U2SURPO15042 1029 aaKnown RBP22.24■■□□□ 1.15
LIN37-209ENST00000595455 KIF24Q5T7B8 1368 aa22.23■■□□□ 1.15
LIN37-209ENST00000595455 COL5A2P05997 1499 aaPredicted RBP22.23■■□□□ 1.15
LIN37-209ENST00000595455 SLIT2O94813 1529 aa22.23■■□□□ 1.15
LIN37-209ENST00000595455 NBPF6Q5VWK0 638 aa22.23■■□□□ 1.15
LIN37-209ENST00000595455 NBPF4Q96M43 638 aa22.23■■□□□ 1.15
LIN37-209ENST00000595455 ERBB3P21860 1342 aa22.23■■□□□ 1.15
LIN37-209ENST00000595455 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
LIN37-209ENST00000595455 NRAPQ86VF7 1730 aa22.22■■□□□ 1.15
LIN37-209ENST00000595455 EYA1Q99502 592 aa22.22■■□□□ 1.15
LIN37-209ENST00000595455 NLRP2Q9NX02 1062 aa22.22■■□□□ 1.15
LIN37-209ENST00000595455 BCL9LQ86UU0 1499 aa22.22■■□□□ 1.15
LIN37-209ENST00000595455 FNBP4Q8N3X1 1017 aaPredicted RBP22.21■■□□□ 1.15
LIN37-209ENST00000595455 USP35Q9P2H5 1018 aa22.21■■□□□ 1.15
LIN37-209ENST00000595455 USP21Q9UK80 565 aa22.21■■□□□ 1.15
LIN37-209ENST00000595455 HMOX1P09601 288 aa22.2■■□□□ 1.14
LIN37-209ENST00000595455 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
LIN37-209ENST00000595455 NWD2Q9ULI1 1742 aa22.19■■□□□ 1.14
LIN37-209ENST00000595455 CCER2I3L3R5 266 aa22.19■■□□□ 1.14
LIN37-209ENST00000595455 AEBP1Q8IUX7 1158 aa22.19■■□□□ 1.14
LIN37-209ENST00000595455 UNC5CLQ8IV45 518 aa22.19■■□□□ 1.14
LIN37-209ENST00000595455 ABCC6O95255 1503 aa22.19■■□□□ 1.14
LIN37-209ENST00000595455 WDR17Q8IZU2 1322 aa22.18■■□□□ 1.14
LIN37-209ENST00000595455 FAM9BQ8IZU0 186 aa22.18■■□□□ 1.14
LIN37-209ENST00000595455 CCDC9Q9Y3X0 531 aaKnown RBP22.18■■□□□ 1.14
LIN37-209ENST00000595455 SENP3-EIF4A1A0A087X0R7 540 aa22.17■■□□□ 1.14
LIN37-209ENST00000595455 U2AF1L5P0DN76 240 aaPredicted RBP22.17■■□□□ 1.14
LIN37-209ENST00000595455 U2AF1Q01081 240 aaKnown RBP eCLIP22.17■■□□□ 1.14
LIN37-209ENST00000595455 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
LIN37-209ENST00000595455 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
LIN37-209ENST00000595455 RGPD1P0DJD0 1748 aa22.15■■□□□ 1.14
LIN37-209ENST00000595455 SULT6B1Q6IMI4 303 aa22.15■■□□□ 1.14
LIN37-209ENST00000595455 NUDCQ9Y266 331 aa22.14■■□□□ 1.14
LIN37-209ENST00000595455 WDR43Q15061 677 aaKnown RBP eCLIP22.13■■□□□ 1.13
LIN37-209ENST00000595455 RGS17Q9UGC6 210 aaPredicted RBP22.13■■□□□ 1.13
LIN37-209ENST00000595455 IGSF1Q8N6C5 1336 aa22.13■■□□□ 1.13
LIN37-209ENST00000595455 CRB1P82279 1406 aa22.12■■□□□ 1.13
LIN37-209ENST00000595455 CCDC146Q8IYE0 955 aa22.12■■□□□ 1.13
LIN37-209ENST00000595455 QTRT2Q9H974 415 aaKnown RBP22.12■■□□□ 1.13
LIN37-209ENST00000595455 FAM208AQ9UK61 1670 aaKnown RBP22.12■■□□□ 1.13
LIN37-209ENST00000595455 CARD10Q9BWT7 1032 aa22.11■■□□□ 1.13
LIN37-209ENST00000595455 VPS72Q15906 364 aa22.1■■□□□ 1.13
LIN37-209ENST00000595455 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.1■■□□□ 1.13
LIN37-209ENST00000595455 SPATA31A1Q5TZJ5 1347 aa22.1■■□□□ 1.13
LIN37-209ENST00000595455 SPATA31A5Q5VU36 1347 aa22.1■■□□□ 1.13
LIN37-209ENST00000595455 SPATA31A7Q8IWB4 1347 aa22.1■■□□□ 1.13
LIN37-209ENST00000595455 PHF23Q9BUL5 403 aaPredicted RBP22.09■■□□□ 1.13
LIN37-209ENST00000595455 RSPH6AQ9H0K4 717 aa22.08■■□□□ 1.13
LIN37-209ENST00000595455 ATRNO75882 1429 aa22.07■■□□□ 1.12
LIN37-209ENST00000595455 PRKAR2BP31323 418 aa22.07■■□□□ 1.12
LIN37-209ENST00000595455 FAM98CQ17RN3 349 aaKnown RBP22.06■■□□□ 1.12
LIN37-209ENST00000595455 POTEAQ6S8J7 498 aa22.06■■□□□ 1.12
LIN37-209ENST00000595455 PHACTR3Q96KR7 559 aa22.06■■□□□ 1.12
LIN37-209ENST00000595455 TRPC5Q9UL62 973 aaPredicted RBP22.06■■□□□ 1.12
LIN37-209ENST00000595455 TCP11L2Q8N4U5 519 aa22.06■■□□□ 1.12
LIN37-209ENST00000595455 GJD4Q96KN9 370 aaPredicted RBP22.06■■□□□ 1.12
LIN37-209ENST00000595455 GLI3P10071 1580 aa22.05■■□□□ 1.12
LIN37-209ENST00000595455 MEGF6O75095 1541 aa22.05■■□□□ 1.12
LIN37-209ENST00000595455 NCAPD2Q15021 1401 aa22.04■■□□□ 1.12
LIN37-209ENST00000595455 ZNF772Q68DY9 489 aaPredicted RBP22.04■■□□□ 1.12
LIN37-209ENST00000595455 PLEKHF1Q96S99 279 aa22.03■■□□□ 1.12
LIN37-209ENST00000595455 KDRP35968 1356 aa22.03■■□□□ 1.12
LIN37-209ENST00000595455 FCHSD2O94868 740 aa22.02■■□□□ 1.12
LIN37-209ENST00000595455 RAPGEF4Q8WZA2 1011 aa22.02■■□□□ 1.12
LIN37-209ENST00000595455 IL2RBP14784 551 aa22.02■■□□□ 1.11
LIN37-209ENST00000595455 WNK3Q9BYP7 1800 aa22.01■■□□□ 1.11
LIN37-209ENST00000595455 TATP17735 454 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms