RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 CIZ1Q9ULV3 898 aaPredicted RBP5.49□□□□□ -1.53
LRIT3-202ENST00000594814 PRAG1Q86YV5 1406 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 RGS20O76081 388 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 HSP90AB4PQ58FF6 505 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.49□□□□□ -1.53
LRIT3-202ENST00000594814 PLCD4Q9BRC7 762 aa5.49□□□□□ -1.53
LRIT3-202ENST00000594814 MYO5BQ9ULV0 1848 aa5.48□□□□□ -1.53
LRIT3-202ENST00000594814 SOX12O15370 315 aa5.48□□□□□ -1.53
LRIT3-202ENST00000594814 CARD10Q9BWT7 1032 aa5.48□□□□□ -1.53
LRIT3-202ENST00000594814 ZNF500O60304 480 aaPredicted RBP5.48□□□□□ -1.53
LRIT3-202ENST00000594814 RBM25P49756 843 aaKnown RBP5.48□□□□□ -1.53
LRIT3-202ENST00000594814 C8orf37Q96NL8 207 aa5.48□□□□□ -1.53
LRIT3-202ENST00000594814 BLMP54132 1417 aaPredicted RBP5.48□□□□□ -1.53
LRIT3-202ENST00000594814 CHGAP10645 457 aaKnown RBP5.47□□□□□ -1.53
LRIT3-202ENST00000594814 ZSCAN30Q86W11 494 aa5.47□□□□□ -1.53
LRIT3-202ENST00000594814 CCDC94Q9BW85 323 aaPredicted RBP5.47□□□□□ -1.53
LRIT3-202ENST00000594814 PIK3C2BO00750 1634 aa5.47□□□□□ -1.53
LRIT3-202ENST00000594814 AGLP35573 1532 aa5.47□□□□□ -1.53
LRIT3-202ENST00000594814 TRAK2O60296 914 aa5.47□□□□□ -1.53
LRIT3-202ENST00000594814 RCAN3Q9UKA8 241 aa5.47□□□□□ -1.53
LRIT3-202ENST00000594814 PPME1Q9Y570 386 aa5.47□□□□□ -1.53
LRIT3-202ENST00000594814 UHRF1BP1Q6BDS2 1440 aa5.47□□□□□ -1.53
LRIT3-202ENST00000594814 ST20-MTHFSA0A0A6YYL1 179 aa5.47□□□□□ -1.53
LRIT3-202ENST00000594814 LAMC1P11047 1609 aa5.47□□□□□ -1.53
LRIT3-202ENST00000594814 AXDND1Q5T1B0 1012 aaPredicted RBP5.46□□□□□ -1.53
LRIT3-202ENST00000594814 SLX1AQ9BQ83 275 aa5.46□□□□□ -1.53
LRIT3-202ENST00000594814 XRCC6P12956 609 aaKnown RBP eCLIP5.46□□□□□ -1.54
LRIT3-202ENST00000594814 LTKP29376 864 aa5.46□□□□□ -1.54
LRIT3-202ENST00000594814 CCDC184Q52MB2 194 aa5.46□□□□□ -1.54
LRIT3-202ENST00000594814 MADDQ8WXG6 1647 aa5.46□□□□□ -1.54
LRIT3-202ENST00000594814 TMEM131LA2VDJ0 1609 aa5.46□□□□□ -1.54
LRIT3-202ENST00000594814 ERVK-7P63135 1459 aa5.46□□□□□ -1.54
LRIT3-202ENST00000594814 HMGN5P82970 282 aaKnown RBP5.46□□□□□ -1.54
LRIT3-202ENST00000594814 TRPM1Q7Z4N2 1603 aa5.46□□□□□ -1.54
LRIT3-202ENST00000594814 EGFL6Q8IUX8 553 aa5.46□□□□□ -1.54
LRIT3-202ENST00000594814 TESK2Q96S53 571 aa5.46□□□□□ -1.54
LRIT3-202ENST00000594814 YY1AP1Q9H869 796 aa5.46□□□□□ -1.54
LRIT3-202ENST00000594814 ADGRB3O60242 1522 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 UPF2Q9HAU5 1272 aaKnown RBP5.45□□□□□ -1.54
LRIT3-202ENST00000594814 KANK1Q14678 1352 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 FRAT2O75474 233 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-202ENST00000594814 SLC4A2P04920 1241 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 GPATCH3Q96I76 525 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 PRIMPOLQ96LW4 560 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 GRPEL1Q9HAV7 217 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 TERF2IPQ9NYB0 399 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 CGNL1Q0VF96 1302 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 NBPF11Q86T75 865 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 PNISRQ8TF01 805 aaKnown RBP5.45□□□□□ -1.54
LRIT3-202ENST00000594814 MTA3Q9BTC8 594 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 ANTXR1Q9H6X2 564 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 CHMP5Q9NZZ3 219 aa5.45□□□□□ -1.54
LRIT3-202ENST00000594814 NEXMIFQ5QGS0 1516 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 PTPRMP28827 1452 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 IFT172Q9UG01 1749 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 MYBBP1AQ9BQG0 1328 aaKnown RBP5.44□□□□□ -1.54
LRIT3-202ENST00000594814 PHF14O94880 888 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 VASPP50552 380 aaPredicted RBP5.44□□□□□ -1.54
LRIT3-202ENST00000594814 LMOD2Q6P5Q4 547 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 PDCL2Q8N4E4 241 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 NCOA3Q9Y6Q9 1424 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 DISP3Q9P2K9 1392 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 KIF7Q2M1P5 1343 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 GTF2F1P35269 517 aaKnown RBP eCLIP5.44□□□□□ -1.54
LRIT3-202ENST00000594814 SRPK2P78362 688 aaKnown RBP5.44□□□□□ -1.54
LRIT3-202ENST00000594814 NBPF20Q3BBV1 942 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 C8orf34Q49A92 452 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 CLEC17AQ6ZS10 378 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 ASXL1Q8IXJ9 1541 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 A2ML1A8K2U0 1454 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 C3P01024 1663 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 USP47Q96K76 1375 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 HSP90AB1P08238 724 aaKnown RBP5.44□□□□□ -1.54
LRIT3-202ENST00000594814 MSNP26038 577 aaKnown RBP5.44□□□□□ -1.54
LRIT3-202ENST00000594814 SASS6Q6UVJ0 657 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 ZNF662Q6ZS27 426 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 KIAA1211Q6ZU35 1233 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 TSPAN18Q96SJ8 248 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 CARD11Q9BXL7 1154 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 NRXN1Q9ULB1 1477 aa5.44□□□□□ -1.54
LRIT3-202ENST00000594814 MCM4P33991 863 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 RBM33Q96EV2 1170 aaKnown RBP5.43□□□□□ -1.54
LRIT3-202ENST00000594814 SLC24A3Q9HC58 644 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 RALGAPBQ86X10 1494 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 CCDC66A2RUB6 948 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 E9PSI1 815 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 APBB1O00213 710 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 GABPB1Q06547 395 aaPredicted RBP5.43□□□□□ -1.54
LRIT3-202ENST00000594814 SYCP1Q15431 976 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 ANKRD23Q86SG2 305 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 ADGRB1O14514 1584 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 NLRP1Q9C000 1473 aa5.43□□□□□ -1.54
LRIT3-202ENST00000594814 PIK3C2GO75747 1445 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 GTPBP6O43824 516 aaPredicted RBP5.42□□□□□ -1.54
LRIT3-202ENST00000594814 WWC1Q8IX03 1113 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 GBP4Q96PP9 640 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 FEZ1Q99689 392 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 RIOK3O14730 519 aaKnown RBP5.42□□□□□ -1.54
LRIT3-202ENST00000594814 PSME1Q06323 249 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 RINLQ6ZS11 566 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms