RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 LTN1O94822 1766 aa15.36■□□□□ 0.05
XRCC1-204ENST00000594511 COL5A2P05997 1499 aaPredicted RBP15.35■□□□□ 0.05
XRCC1-204ENST00000594511 FBLN1P23142 703 aa15.35■□□□□ 0.05
XRCC1-204ENST00000594511 RTL1A6NKG5 1358 aa15.35■□□□□ 0.05
XRCC1-204ENST00000594511 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
XRCC1-204ENST00000594511 BLMP54132 1417 aaPredicted RBP15.34■□□□□ 0.05
XRCC1-204ENST00000594511 SMG6Q86US8 1419 aaKnown RBP15.34■□□□□ 0.05
XRCC1-204ENST00000594511 MAP2P11137 1827 aaKnown RBP15.33■□□□□ 0.05
XRCC1-204ENST00000594511 CDK12Q9NYV4 1490 aaPredicted RBP15.33■□□□□ 0.05
XRCC1-204ENST00000594511 RBM6P78332 1123 aaKnown RBP15.33■□□□□ 0.04
XRCC1-204ENST00000594511 GJD4Q96KN9 370 aaPredicted RBP15.33■□□□□ 0.04
XRCC1-204ENST00000594511 POLKQ9UBT6 870 aa15.33■□□□□ 0.04
XRCC1-204ENST00000594511 RGPD5Q99666 1765 aa15.33■□□□□ 0.04
XRCC1-204ENST00000594511 SPATA31A5Q5VU36 1347 aa15.32■□□□□ 0.04
XRCC1-204ENST00000594511 SPATA31A7Q8IWB4 1347 aa15.32■□□□□ 0.04
XRCC1-204ENST00000594511 GLI3P10071 1580 aa15.32■□□□□ 0.04
XRCC1-204ENST00000594511 PEAK1Q9H792 1746 aa15.31■□□□□ 0.04
XRCC1-204ENST00000594511 SOX12O15370 315 aa15.31■□□□□ 0.04
XRCC1-204ENST00000594511 HOXC9P31274 260 aa15.31■□□□□ 0.04
XRCC1-204ENST00000594511 RRS1Q15050 365 aaKnown RBP15.31■□□□□ 0.04
XRCC1-204ENST00000594511 MORC1Q86VD1 984 aa15.31■□□□□ 0.04
XRCC1-204ENST00000594511 INSRP06213 1382 aa15.31■□□□□ 0.04
XRCC1-204ENST00000594511 ERBB3P21860 1342 aa15.3■□□□□ 0.04
XRCC1-204ENST00000594511 RXRBP28702 533 aa15.3■□□□□ 0.04
XRCC1-204ENST00000594511 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
XRCC1-204ENST00000594511 SPATA31A1Q5TZJ5 1347 aa15.3■□□□□ 0.04
XRCC1-204ENST00000594511 WDR17Q8IZU2 1322 aa15.3■□□□□ 0.04
XRCC1-204ENST00000594511 CRB1P82279 1406 aa15.29■□□□□ 0.04
XRCC1-204ENST00000594511 FLT4P35916 1363 aa15.29■□□□□ 0.04
XRCC1-204ENST00000594511 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
XRCC1-204ENST00000594511 EMILIN1Q9Y6C2 1016 aa15.29■□□□□ 0.04
XRCC1-204ENST00000594511 EVA1CP58658 441 aa15.28■□□□□ 0.04
XRCC1-204ENST00000594511 BARGINQ6ZT62 677 aa15.28■□□□□ 0.04
XRCC1-204ENST00000594511 CARD10Q9BWT7 1032 aa15.28■□□□□ 0.04
XRCC1-204ENST00000594511 THRAP3Q9Y2W1 955 aaKnown RBP15.28■□□□□ 0.04
XRCC1-204ENST00000594511 AMPHP49418 695 aa15.27■□□□□ 0.04
XRCC1-204ENST00000594511 CC2D1BQ5T0F9 858 aaKnown RBP15.27■□□□□ 0.04
XRCC1-204ENST00000594511 ANKRD24Q8TF21 1146 aa15.27■□□□□ 0.04
XRCC1-204ENST00000594511 PARD3Q8TEW0 1356 aa15.26■□□□□ 0.03
XRCC1-204ENST00000594511 FAM208AQ9UK61 1670 aaKnown RBP15.26■□□□□ 0.03
XRCC1-204ENST00000594511 HSP90AB2PQ58FF8 381 aa15.26■□□□□ 0.03
XRCC1-204ENST00000594511 STRN4Q9NRL3 753 aa15.25■□□□□ 0.03
XRCC1-204ENST00000594511 NCAPD2Q15021 1401 aa15.25■□□□□ 0.03
XRCC1-204ENST00000594511 ZBTB7CA1YPR0 619 aa15.24■□□□□ 0.03
XRCC1-204ENST00000594511 ILDR2Q71H61 639 aa15.24■□□□□ 0.03
XRCC1-204ENST00000594511 TCP11L2Q8N4U5 519 aa15.24■□□□□ 0.03
XRCC1-204ENST00000594511 THSD7AQ9UPZ6 1657 aa15.24■□□□□ 0.03
XRCC1-204ENST00000594511 TNNT2P45379 298 aaPredicted RBP15.23■□□□□ 0.03
XRCC1-204ENST00000594511 DISP2A7MBM2 1401 aa15.23■□□□□ 0.03
XRCC1-204ENST00000594511 MTHFSP49914 203 aa15.22■□□□□ 0.03
XRCC1-204ENST00000594511 TOM1L2Q6ZVM7 507 aa15.22■□□□□ 0.03
XRCC1-204ENST00000594511 RGS12O14924 1447 aa15.22■□□□□ 0.03
XRCC1-204ENST00000594511 RALBP1Q15311 655 aa15.21■□□□□ 0.03
XRCC1-204ENST00000594511 CDCA7Q9BWT1 371 aaPredicted RBP15.21■□□□□ 0.03
XRCC1-204ENST00000594511 PPP2R1AP30153 589 aa15.2■□□□□ 0.02
XRCC1-204ENST00000594511 EIF4A2Q14240 407 aaKnown RBP15.2■□□□□ 0.02
XRCC1-204ENST00000594511 NBPF6Q5VWK0 638 aa15.2■□□□□ 0.02
XRCC1-204ENST00000594511 NBPF4Q96M43 638 aa15.2■□□□□ 0.02
XRCC1-204ENST00000594511 WNK3Q9BYP7 1800 aa15.2■□□□□ 0.02
XRCC1-204ENST00000594511 RGPD2P0DJD1 1756 aa15.19■□□□□ 0.02
XRCC1-204ENST00000594511 CSB-PGBD3P0DP91 1061 aa15.19■□□□□ 0.02
XRCC1-204ENST00000594511 IL13P35225 146 aa15.19■□□□□ 0.02
XRCC1-204ENST00000594511 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
XRCC1-204ENST00000594511 SEPT12Q8IYM1 358 aa15.19■□□□□ 0.02
XRCC1-204ENST00000594511 CCDC9Q9Y3X0 531 aaKnown RBP15.19■□□□□ 0.02
XRCC1-204ENST00000594511 PARP4Q9UKK3 1724 aaKnown RBP15.19■□□□□ 0.02
XRCC1-204ENST00000594511 COL3A1P02461 1466 aaPredicted RBP15.19■□□□□ 0.02
XRCC1-204ENST00000594511 EYA1Q99502 592 aa15.18■□□□□ 0.02
XRCC1-204ENST00000594511 NLRP2Q9NX02 1062 aa15.18■□□□□ 0.02
XRCC1-204ENST00000594511 PLEKHG2Q9H7P9 1386 aa15.18■□□□□ 0.02
XRCC1-204ENST00000594511 IGSF1Q8N6C5 1336 aa15.17■□□□□ 0.02
XRCC1-204ENST00000594511 RGPD1P0DJD0 1748 aa15.17■□□□□ 0.02
XRCC1-204ENST00000594511 PPM1GO15355 546 aaPredicted RBP15.17■□□□□ 0.02
XRCC1-204ENST00000594511 LTV1Q96GA3 475 aaPredicted RBP15.17■□□□□ 0.02
XRCC1-204ENST00000594511 PRKRIP1Q9H875 184 aaPredicted RBP15.17■□□□□ 0.02
XRCC1-204ENST00000594511 BRWD3Q6RI45 1802 aa15.17■□□□□ 0.02
XRCC1-204ENST00000594511 IL2RBP14784 551 aa15.15■□□□□ 0.02
XRCC1-204ENST00000594511 USP35Q9P2H5 1018 aa15.15■□□□□ 0.02
XRCC1-204ENST00000594511 KDRP35968 1356 aa15.14■□□□□ 0.01
XRCC1-204ENST00000594511 BCL9O00512 1426 aa15.13■□□□□ 0.01
XRCC1-204ENST00000594511 DIAPH1O60610 1272 aaKnown RBP15.13■□□□□ 0.01
XRCC1-204ENST00000594511 LRRC37A3O60309 1634 aa15.13■□□□□ 0.01
XRCC1-204ENST00000594511 MYBBP1AQ9BQG0 1328 aaKnown RBP15.13■□□□□ 0.01
XRCC1-204ENST00000594511 OVOS2A0A0G2JMS6 1433 aa15.12■□□□□ 0.01
XRCC1-204ENST00000594511 KRT27Q7Z3Y8 459 aa15.12■□□□□ 0.01
XRCC1-204ENST00000594511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.01
XRCC1-204ENST00000594511 EXOC5O00471 708 aa15.11■□□□□ 0.01
XRCC1-204ENST00000594511 MEGF6O75095 1541 aa15.11■□□□□ 0.01
XRCC1-204ENST00000594511 TNS2Q63HR2 1409 aa15.1■□□□□ 0.01
XRCC1-204ENST00000594511 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
XRCC1-204ENST00000594511 DDB1Q16531 1140 aa15.1■□□□□ 0.01
XRCC1-204ENST00000594511 CFAP53Q96M91 514 aa15.1■□□□□ 0.01
XRCC1-204ENST00000594511 USHBP1Q8N6Y0 703 aa15.09■□□□□ 0.01
XRCC1-204ENST00000594511 MARCH10Q8NA82 808 aaPredicted RBP15.09■□□□□ 0.01
XRCC1-204ENST00000594511 PKD1L3Q7Z443 1732 aa15.09■□□□□ 0.01
XRCC1-204ENST00000594511 SHANK3Q9BYB0 1731 aa15.09■□□□□ 0.01
XRCC1-204ENST00000594511 RAPGEF4Q8WZA2 1011 aa15.08■□□□□ 0
XRCC1-204ENST00000594511 TATP17735 454 aaPredicted RBP15.07■□□□□ 0
XRCC1-204ENST00000594511 PDE3BQ13370 1112 aa15.07■□□□□ 0
XRCC1-204ENST00000594511 ZCRB1Q8TBF4 217 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms