RNA–Protein interactions for RNA: ENST00000593598.5

SNAPC2-202, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 3

Gene SNAPC2, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-202ENST00000593598 COL18A1P39060 1754 aa18.77■□□□□ 0.6
SNAPC2-202ENST00000593598 GJD4Q96KN9 370 aaPredicted RBP18.76■□□□□ 0.59
SNAPC2-202ENST00000593598 NRAPQ86VF7 1730 aa18.76■□□□□ 0.59
SNAPC2-202ENST00000593598 MAP3K19Q56UN5 1328 aa18.75■□□□□ 0.59
SNAPC2-202ENST00000593598 ANKRD26Q9UPS8 1709 aa18.75■□□□□ 0.59
SNAPC2-202ENST00000593598 RRS1Q15050 365 aaKnown RBP18.75■□□□□ 0.59
SNAPC2-202ENST00000593598 MORC1Q86VD1 984 aa18.75■□□□□ 0.59
SNAPC2-202ENST00000593598 IP6K1Q92551 441 aa18.75■□□□□ 0.59
SNAPC2-202ENST00000593598 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
SNAPC2-202ENST00000593598 LTN1O94822 1766 aa18.75■□□□□ 0.59
SNAPC2-202ENST00000593598 ABCC6O95255 1503 aa18.74■□□□□ 0.59
SNAPC2-202ENST00000593598 NPC1L1Q9UHC9 1359 aa18.74■□□□□ 0.59
SNAPC2-202ENST00000593598 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
SNAPC2-202ENST00000593598 AMPHP49418 695 aa18.74■□□□□ 0.59
SNAPC2-202ENST00000593598 COL5A2P05997 1499 aaPredicted RBP18.73■□□□□ 0.59
SNAPC2-202ENST00000593598 CC2D1BQ5T0F9 858 aaKnown RBP18.73■□□□□ 0.59
SNAPC2-202ENST00000593598 HOXC9P31274 260 aa18.72■□□□□ 0.59
SNAPC2-202ENST00000593598 TNNT2P45379 298 aaPredicted RBP18.72■□□□□ 0.59
SNAPC2-202ENST00000593598 DDX10Q13206 875 aaKnown RBP18.72■□□□□ 0.59
SNAPC2-202ENST00000593598 LARP1Q6PKG0 1096 aaKnown RBP18.72■□□□□ 0.59
SNAPC2-202ENST00000593598 SPATA31A5Q5VU36 1347 aa18.72■□□□□ 0.59
SNAPC2-202ENST00000593598 SPATA31A7Q8IWB4 1347 aa18.72■□□□□ 0.59
SNAPC2-202ENST00000593598 RGPD5Q99666 1765 aa18.71■□□□□ 0.59
SNAPC2-202ENST00000593598 RTL1A6NKG5 1358 aa18.7■□□□□ 0.58
SNAPC2-202ENST00000593598 KIF24Q5T7B8 1368 aa18.7■□□□□ 0.58
SNAPC2-202ENST00000593598 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
SNAPC2-202ENST00000593598 BLMP54132 1417 aaPredicted RBP18.7■□□□□ 0.58
SNAPC2-202ENST00000593598 POLKQ9UBT6 870 aa18.7■□□□□ 0.58
SNAPC2-202ENST00000593598 WDR17Q8IZU2 1322 aa18.7■□□□□ 0.58
SNAPC2-202ENST00000593598 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
SNAPC2-202ENST00000593598 EMILIN1Q9Y6C2 1016 aa18.69■□□□□ 0.58
SNAPC2-202ENST00000593598 SPATA31A1Q5TZJ5 1347 aa18.69■□□□□ 0.58
SNAPC2-202ENST00000593598 GLI3P10071 1580 aa18.68■□□□□ 0.58
SNAPC2-202ENST00000593598 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
SNAPC2-202ENST00000593598 TOM1L2Q6ZVM7 507 aa18.68■□□□□ 0.58
SNAPC2-202ENST00000593598 ANKRD24Q8TF21 1146 aa18.68■□□□□ 0.58
SNAPC2-202ENST00000593598 ERBB3P21860 1342 aa18.68■□□□□ 0.58
SNAPC2-202ENST00000593598 FLT4P35916 1363 aa18.68■□□□□ 0.58
SNAPC2-202ENST00000593598 CRB1P82279 1406 aa18.67■□□□□ 0.58
SNAPC2-202ENST00000593598 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
SNAPC2-202ENST00000593598 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
SNAPC2-202ENST00000593598 ONECUT3O60422 494 aaPredicted RBP18.67■□□□□ 0.58
SNAPC2-202ENST00000593598 USP35Q9P2H5 1018 aa18.67■□□□□ 0.58
SNAPC2-202ENST00000593598 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
SNAPC2-202ENST00000593598 LTV1Q96GA3 475 aaPredicted RBP18.66■□□□□ 0.58
SNAPC2-202ENST00000593598 THRAP3Q9Y2W1 955 aaKnown RBP18.66■□□□□ 0.58
SNAPC2-202ENST00000593598 FAM98CQ17RN3 349 aaKnown RBP18.65■□□□□ 0.58
SNAPC2-202ENST00000593598 TCP11L2Q8N4U5 519 aa18.65■□□□□ 0.58
SNAPC2-202ENST00000593598 CARD10Q9BWT7 1032 aa18.65■□□□□ 0.58
SNAPC2-202ENST00000593598 PEAK1Q9H792 1746 aa18.65■□□□□ 0.58
SNAPC2-202ENST00000593598 INSRP06213 1382 aa18.65■□□□□ 0.58
SNAPC2-202ENST00000593598 BARGINQ6ZT62 677 aa18.64■□□□□ 0.57
SNAPC2-202ENST00000593598 NLRP2Q9NX02 1062 aa18.63■□□□□ 0.57
SNAPC2-202ENST00000593598 RGS12O14924 1447 aa18.63■□□□□ 0.57
SNAPC2-202ENST00000593598 SEPT12Q8IYM1 358 aa18.62■□□□□ 0.57
SNAPC2-202ENST00000593598 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
SNAPC2-202ENST00000593598 A0A0G2JS52 829 aa18.6■□□□□ 0.57
SNAPC2-202ENST00000593598 MTHFSP49914 203 aa18.6■□□□□ 0.57
SNAPC2-202ENST00000593598 MYT1Q01538 1121 aa18.6■□□□□ 0.57
SNAPC2-202ENST00000593598 NBPF6Q5VWK0 638 aa18.58■□□□□ 0.56
SNAPC2-202ENST00000593598 NBPF4Q96M43 638 aa18.58■□□□□ 0.56
SNAPC2-202ENST00000593598 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.56
SNAPC2-202ENST00000593598 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
SNAPC2-202ENST00000593598 EIF4A2Q14240 407 aaKnown RBP18.57■□□□□ 0.56
SNAPC2-202ENST00000593598 PARD3Q8TEW0 1356 aa18.55■□□□□ 0.56
SNAPC2-202ENST00000593598 THSD7AQ9UPZ6 1657 aa18.55■□□□□ 0.56
SNAPC2-202ENST00000593598 PPP2R1AP30153 589 aa18.55■□□□□ 0.56
SNAPC2-202ENST00000593598 RALBP1Q15311 655 aa18.55■□□□□ 0.56
SNAPC2-202ENST00000593598 UPF1Q92900 1129 aaKnown RBP eCLIP18.55■□□□□ 0.56
SNAPC2-202ENST00000593598 RGPD2P0DJD1 1756 aa18.55■□□□□ 0.56
SNAPC2-202ENST00000593598 IL2RBP14784 551 aa18.54■□□□□ 0.56
SNAPC2-202ENST00000593598 KRT27Q7Z3Y8 459 aa18.54■□□□□ 0.56
SNAPC2-202ENST00000593598 EYA1Q99502 592 aa18.54■□□□□ 0.56
SNAPC2-202ENST00000593598 DISP2A7MBM2 1401 aa18.53■□□□□ 0.56
SNAPC2-202ENST00000593598 USHBP1Q8N6Y0 703 aa18.53■□□□□ 0.56
SNAPC2-202ENST00000593598 BRWD3Q6RI45 1802 aa18.53■□□□□ 0.56
SNAPC2-202ENST00000593598 DDB1Q16531 1140 aa18.52■□□□□ 0.56
SNAPC2-202ENST00000593598 EXOC5O00471 708 aa18.51■□□□□ 0.55
SNAPC2-202ENST00000593598 IL13P35225 146 aa18.51■□□□□ 0.55
SNAPC2-202ENST00000593598 PDE3BQ13370 1112 aa18.51■□□□□ 0.55
SNAPC2-202ENST00000593598 PARP4Q9UKK3 1724 aaKnown RBP18.51■□□□□ 0.55
SNAPC2-202ENST00000593598 WNK3Q9BYP7 1800 aa18.51■□□□□ 0.55
SNAPC2-202ENST00000593598 DIAPH1O60610 1272 aaKnown RBP18.5■□□□□ 0.55
SNAPC2-202ENST00000593598 CFAP53Q96M91 514 aa18.5■□□□□ 0.55
SNAPC2-202ENST00000593598 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
SNAPC2-202ENST00000593598 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
SNAPC2-202ENST00000593598 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
SNAPC2-202ENST00000593598 PRKRIP1Q9H875 184 aaPredicted RBP18.48■□□□□ 0.55
SNAPC2-202ENST00000593598 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
SNAPC2-202ENST00000593598 LRRC37A3O60309 1634 aa18.46■□□□□ 0.55
SNAPC2-202ENST00000593598 MYBBP1AQ9BQG0 1328 aaKnown RBP18.46■□□□□ 0.55
SNAPC2-202ENST00000593598 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.54
SNAPC2-202ENST00000593598 MEGF6O75095 1541 aa18.45■□□□□ 0.54
SNAPC2-202ENST00000593598 FAM182BQ5T319 152 aa18.45■□□□□ 0.54
SNAPC2-202ENST00000593598 OVOS2A0A0G2JMS6 1433 aa18.44■□□□□ 0.54
SNAPC2-202ENST00000593598 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
SNAPC2-202ENST00000593598 SULT6B1Q6IMI4 303 aa18.44■□□□□ 0.54
SNAPC2-202ENST00000593598 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
SNAPC2-202ENST00000593598 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
SNAPC2-202ENST00000593598 MARCH10Q8NA82 808 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms