RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 BTG4Q9NY30 223 aa13.33□□□□□ -0.28
TPM4-215ENST00000592138 NRAPQ86VF7 1730 aa13.33□□□□□ -0.28
TPM4-215ENST00000592138 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
TPM4-215ENST00000592138 CAMTA1Q9Y6Y1 1673 aa13.31□□□□□ -0.28
TPM4-215ENST00000592138 COL5A2P05997 1499 aaPredicted RBP13.31□□□□□ -0.28
TPM4-215ENST00000592138 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
TPM4-215ENST00000592138 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
TPM4-215ENST00000592138 VPS72Q15906 364 aa13.31□□□□□ -0.28
TPM4-215ENST00000592138 QTRT2Q9H974 415 aaKnown RBP13.31□□□□□ -0.28
TPM4-215ENST00000592138 BLMP54132 1417 aaPredicted RBP13.3□□□□□ -0.28
TPM4-215ENST00000592138 COL18A1P39060 1754 aa13.3□□□□□ -0.28
TPM4-215ENST00000592138 SOX12O15370 315 aa13.29□□□□□ -0.28
TPM4-215ENST00000592138 RBM6P78332 1123 aaKnown RBP13.29□□□□□ -0.28
TPM4-215ENST00000592138 MAP3K19Q56UN5 1328 aa13.29□□□□□ -0.28
TPM4-215ENST00000592138 IP6K1Q92551 441 aa13.28□□□□□ -0.28
TPM4-215ENST00000592138 GJD4Q96KN9 370 aaPredicted RBP13.28□□□□□ -0.28
TPM4-215ENST00000592138 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
TPM4-215ENST00000592138 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
TPM4-215ENST00000592138 SPATA31A5Q5VU36 1347 aa13.27□□□□□ -0.29
TPM4-215ENST00000592138 SPATA31A7Q8IWB4 1347 aa13.27□□□□□ -0.29
TPM4-215ENST00000592138 FLT4P35916 1363 aa13.27□□□□□ -0.29
TPM4-215ENST00000592138 LTN1O94822 1766 aa13.27□□□□□ -0.29
TPM4-215ENST00000592138 ERBB3P21860 1342 aa13.26□□□□□ -0.29
TPM4-215ENST00000592138 HOXC9P31274 260 aa13.26□□□□□ -0.29
TPM4-215ENST00000592138 EVA1CP58658 441 aa13.26□□□□□ -0.29
TPM4-215ENST00000592138 CRB1P82279 1406 aa13.26□□□□□ -0.29
TPM4-215ENST00000592138 SPATA31A1Q5TZJ5 1347 aa13.26□□□□□ -0.29
TPM4-215ENST00000592138 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
TPM4-215ENST00000592138 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
TPM4-215ENST00000592138 GLI3P10071 1580 aa13.25□□□□□ -0.29
TPM4-215ENST00000592138 INSRP06213 1382 aa13.25□□□□□ -0.29
TPM4-215ENST00000592138 ZBTB7CA1YPR0 619 aa13.25□□□□□ -0.29
TPM4-215ENST00000592138 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
TPM4-215ENST00000592138 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
TPM4-215ENST00000592138 AMPHP49418 695 aa13.25□□□□□ -0.29
TPM4-215ENST00000592138 RRS1Q15050 365 aaKnown RBP13.25□□□□□ -0.29
TPM4-215ENST00000592138 THRAP3Q9Y2W1 955 aaKnown RBP13.25□□□□□ -0.29
TPM4-215ENST00000592138 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
TPM4-215ENST00000592138 STRN4Q9NRL3 753 aa13.24□□□□□ -0.29
TPM4-215ENST00000592138 POLKQ9UBT6 870 aa13.24□□□□□ -0.29
TPM4-215ENST00000592138 FBLN1P23142 703 aa13.23□□□□□ -0.29
TPM4-215ENST00000592138 BARGINQ6ZT62 677 aa13.23□□□□□ -0.29
TPM4-215ENST00000592138 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
TPM4-215ENST00000592138 PEAK1Q9H792 1746 aa13.22□□□□□ -0.29
TPM4-215ENST00000592138 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
TPM4-215ENST00000592138 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
TPM4-215ENST00000592138 CARD10Q9BWT7 1032 aa13.22□□□□□ -0.29
TPM4-215ENST00000592138 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
TPM4-215ENST00000592138 EMILIN1Q9Y6C2 1016 aa13.22□□□□□ -0.29
TPM4-215ENST00000592138 DDX10Q13206 875 aaKnown RBP13.21□□□□□ -0.29
TPM4-215ENST00000592138 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
TPM4-215ENST00000592138 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
TPM4-215ENST00000592138 LRP5O75197 1615 aa13.21□□□□□ -0.3
TPM4-215ENST00000592138 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
TPM4-215ENST00000592138 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
TPM4-215ENST00000592138 HSP90AB2PQ58FF8 381 aa13.2□□□□□ -0.3
TPM4-215ENST00000592138 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
TPM4-215ENST00000592138 THSD7AQ9UPZ6 1657 aa13.2□□□□□ -0.3
TPM4-215ENST00000592138 PARD3Q8TEW0 1356 aa13.19□□□□□ -0.3
TPM4-215ENST00000592138 FAM98CQ17RN3 349 aaKnown RBP13.18□□□□□ -0.3
TPM4-215ENST00000592138 DISP2A7MBM2 1401 aa13.18□□□□□ -0.3
TPM4-215ENST00000592138 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
TPM4-215ENST00000592138 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
TPM4-215ENST00000592138 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
TPM4-215ENST00000592138 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
TPM4-215ENST00000592138 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
TPM4-215ENST00000592138 RALBP1Q15311 655 aa13.16□□□□□ -0.3
TPM4-215ENST00000592138 SEPT12Q8IYM1 358 aa13.16□□□□□ -0.3
TPM4-215ENST00000592138 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
TPM4-215ENST00000592138 USP35Q9P2H5 1018 aa13.16□□□□□ -0.3
TPM4-215ENST00000592138 MTHFSP49914 203 aa13.15□□□□□ -0.3
TPM4-215ENST00000592138 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
TPM4-215ENST00000592138 LTV1Q96GA3 475 aaPredicted RBP13.15□□□□□ -0.3
TPM4-215ENST00000592138 PARP4Q9UKK3 1724 aaKnown RBP13.15□□□□□ -0.3
TPM4-215ENST00000592138 PPP2R1AP30153 589 aa13.14□□□□□ -0.31
TPM4-215ENST00000592138 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
TPM4-215ENST00000592138 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
TPM4-215ENST00000592138 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
TPM4-215ENST00000592138 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
TPM4-215ENST00000592138 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
TPM4-215ENST00000592138 IL2RBP14784 551 aa13.13□□□□□ -0.31
TPM4-215ENST00000592138 TNS2Q63HR2 1409 aa13.13□□□□□ -0.31
TPM4-215ENST00000592138 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
TPM4-215ENST00000592138 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
TPM4-215ENST00000592138 IL13P35225 146 aa13.12□□□□□ -0.31
TPM4-215ENST00000592138 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
TPM4-215ENST00000592138 LRRC37A3O60309 1634 aa13.12□□□□□ -0.31
TPM4-215ENST00000592138 A0A0G2JS52 829 aa13.11□□□□□ -0.31
TPM4-215ENST00000592138 MYT1Q01538 1121 aa13.11□□□□□ -0.31
TPM4-215ENST00000592138 DDB1Q16531 1140 aa13.11□□□□□ -0.31
TPM4-215ENST00000592138 CFAP53Q96M91 514 aa13.11□□□□□ -0.31
TPM4-215ENST00000592138 EYA1Q99502 592 aa13.11□□□□□ -0.31
TPM4-215ENST00000592138 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
TPM4-215ENST00000592138 KDRP35968 1356 aa13.1□□□□□ -0.31
TPM4-215ENST00000592138 DIAPH1O60610 1272 aaKnown RBP13.1□□□□□ -0.31
TPM4-215ENST00000592138 CNGB1Q14028 1251 aaPredicted RBP13.1□□□□□ -0.31
TPM4-215ENST00000592138 PRKRIP1Q9H875 184 aaPredicted RBP13.1□□□□□ -0.31
TPM4-215ENST00000592138 BCL9O00512 1426 aa13.1□□□□□ -0.31
TPM4-215ENST00000592138 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
TPM4-215ENST00000592138 MYBBP1AQ9BQG0 1328 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms