RNA–Protein interactions for RNA: ENST00000592052.1

TMEM259-208, Transcript of transmembrane protein 259, human

Gene TMEM259, Length 1,637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-208	ENST00000592052	AXIN2	Q9Y2T1	843 aa		33.54	■■■□□ 2.96
TMEM259-208	ENST00000592052	MAP2	P11137	1827 aa	Known RBP	33.54	■■■□□ 2.96
TMEM259-208	ENST00000592052	HOXC9	P31274	260 aa		33.53	■■■□□ 2.96
TMEM259-208	ENST00000592052	COL18A1	P39060	1754 aa		33.53	■■■□□ 2.96
TMEM259-208	ENST00000592052	FLT4	P35916	1363 aa		33.53	■■■□□ 2.96
TMEM259-208	ENST00000592052	USP21	Q9UK80	565 aa		33.53	■■■□□ 2.96
TMEM259-208	ENST00000592052	CAMTA1	Q9Y6Y1	1673 aa		33.52	■■■□□ 2.96
TMEM259-208	ENST00000592052	BLM	P54132	1417 aa	Predicted RBP	33.51	■■■□□ 2.96
TMEM259-208	ENST00000592052	SMG6	Q86US8	1419 aa	Known RBP	33.51	■■■□□ 2.96
TMEM259-208	ENST00000592052	NWD2	Q9ULI1	1742 aa		33.51	■■■□□ 2.96
TMEM259-208	ENST00000592052	PHF23	Q9BUL5	403 aa	Predicted RBP	33.51	■■■□□ 2.96
TMEM259-208	ENST00000592052	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.51	■■■□□ 2.96
TMEM259-208	ENST00000592052	UNC5CL	Q8IV45	518 aa		33.5	■■■□□ 2.95
TMEM259-208	ENST00000592052	BCL9L	Q86UU0	1499 aa		33.5	■■■□□ 2.95
TMEM259-208	ENST00000592052	PPP2R1A	P30153	589 aa		33.5	■■■□□ 2.95
TMEM259-208	ENST00000592052	MTHFS	P49914	203 aa		33.5	■■■□□ 2.95
TMEM259-208	ENST00000592052	PEAK1	Q9H792	1746 aa		33.49	■■■□□ 2.95
TMEM259-208	ENST00000592052	EVA1C	P58658	441 aa		33.49	■■■□□ 2.95
TMEM259-208	ENST00000592052	ANP32C	O43423	234 aa		33.47	■■■□□ 2.95
TMEM259-208	ENST00000592052	STRN4	Q9NRL3	753 aa		33.47	■■■□□ 2.95
TMEM259-208	ENST00000592052	COL5A2	P05997	1499 aa	Predicted RBP	33.47	■■■□□ 2.95
TMEM259-208	ENST00000592052	HSP90AB2P	Q58FF8	381 aa		33.46	■■■□□ 2.95
TMEM259-208	ENST00000592052	ZNF772	Q68DY9	489 aa	Predicted RBP	33.46	■■■□□ 2.95
TMEM259-208	ENST00000592052	INSR	P06213	1382 aa		33.46	■■■□□ 2.95
TMEM259-208	ENST00000592052	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.45	■■■□□ 2.95
TMEM259-208	ENST00000592052	ANKRD24	Q8TF21	1146 aa		33.44	■■■□□ 2.94
TMEM259-208	ENST00000592052	NRAP	Q86VF7	1730 aa		33.44	■■■□□ 2.94
TMEM259-208	ENST00000592052	ERBB3	P21860	1342 aa		33.43	■■■□□ 2.94
TMEM259-208	ENST00000592052	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.43	■■■□□ 2.94
TMEM259-208	ENST00000592052	RGPD5	Q99666	1765 aa		33.43	■■■□□ 2.94
TMEM259-208	ENST00000592052	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.42	■■■□□ 2.94
TMEM259-208	ENST00000592052	CSB-PGBD3	P0DP91	1061 aa		33.42	■■■□□ 2.94
TMEM259-208	ENST00000592052	LTV1	Q96GA3	475 aa	Predicted RBP	33.42	■■■□□ 2.94
TMEM259-208	ENST00000592052	WDR17	Q8IZU2	1322 aa		33.41	■■■□□ 2.94
TMEM259-208	ENST00000592052	DIEXF	Q68CQ4	756 aa	Known RBP	33.4	■■■□□ 2.94
TMEM259-208	ENST00000592052	TRPC5	Q9UL62	973 aa	Predicted RBP	33.4	■■■□□ 2.94
TMEM259-208	ENST00000592052	VPS72	Q15906	364 aa		33.39	■■■□□ 2.94
TMEM259-208	ENST00000592052	LARP1	Q6PKG0	1096 aa	Known RBP	33.39	■■■□□ 2.94
TMEM259-208	ENST00000592052	QTRT2	Q9H974	415 aa	Known RBP	33.39	■■■□□ 2.93
TMEM259-208	ENST00000592052	CFAP53	Q96M91	514 aa		33.38	■■■□□ 2.93
TMEM259-208	ENST00000592052	RGS17	Q9UGC6	210 aa	Predicted RBP	33.38	■■■□□ 2.93
TMEM259-208	ENST00000592052	CCDC9	Q9Y3X0	531 aa	Known RBP	33.37	■■■□□ 2.93
TMEM259-208	ENST00000592052	ATRN	O75882	1429 aa		33.37	■■■□□ 2.93
TMEM259-208	ENST00000592052	TOM1L2	Q6ZVM7	507 aa		33.36	■■■□□ 2.93
TMEM259-208	ENST00000592052	CRB1	P82279	1406 aa		33.35	■■■□□ 2.93
TMEM259-208	ENST00000592052	EIF4A2	Q14240	407 aa	Known RBP	33.34	■■■□□ 2.93
TMEM259-208	ENST00000592052	NLRP2	Q9NX02	1062 aa		33.34	■■■□□ 2.93
TMEM259-208	ENST00000592052	SPATA31A5	Q5VU36	1347 aa		33.32	■■■□□ 2.92
TMEM259-208	ENST00000592052	SPATA31A7	Q8IWB4	1347 aa		33.32	■■■□□ 2.92
TMEM259-208	ENST00000592052	CARD10	Q9BWT7	1032 aa		33.31	■■■□□ 2.92
TMEM259-208	ENST00000592052	FAM208A	Q9UK61	1670 aa	Known RBP	33.3	■■■□□ 2.92
TMEM259-208	ENST00000592052	DIAPH1	O60610	1272 aa	Known RBP	33.3	■■■□□ 2.92
TMEM259-208	ENST00000592052	GJD4	Q96KN9	370 aa	Predicted RBP	33.3	■■■□□ 2.92
TMEM259-208	ENST00000592052	SPATA31A1	Q5TZJ5	1347 aa		33.3	■■■□□ 2.92
TMEM259-208	ENST00000592052	USP35	Q9P2H5	1018 aa		33.29	■■■□□ 2.92
TMEM259-208	ENST00000592052	COL3A1	P02461	1466 aa	Predicted RBP	33.28	■■■□□ 2.92
TMEM259-208	ENST00000592052	IL13	P35225	146 aa		33.28	■■■□□ 2.92
TMEM259-208	ENST00000592052	POTEA	Q6S8J7	498 aa		33.27	■■■□□ 2.92
TMEM259-208	ENST00000592052	NBPF6	Q5VWK0	638 aa		33.26	■■■□□ 2.91
TMEM259-208	ENST00000592052	NBPF4	Q96M43	638 aa		33.26	■■■□□ 2.91
TMEM259-208	ENST00000592052	TCP11L2	Q8N4U5	519 aa		33.25	■■■□□ 2.91
TMEM259-208	ENST00000592052	RBM6	P78332	1123 aa	Known RBP	33.24	■■■□□ 2.91
TMEM259-208	ENST00000592052	THRAP3	Q9Y2W1	955 aa	Known RBP	33.24	■■■□□ 2.91
TMEM259-208	ENST00000592052	EYA1	Q99502	592 aa		33.24	■■■□□ 2.91
TMEM259-208	ENST00000592052	RXRB	P28702	533 aa		33.22	■■■□□ 2.91
TMEM259-208	ENST00000592052	GLI3	P10071	1580 aa		33.21	■■■□□ 2.91
TMEM259-208	ENST00000592052	NUDC	Q9Y266	331 aa		33.21	■■■□□ 2.91
TMEM259-208	ENST00000592052	IGSF1	Q8N6C5	1336 aa		33.2	■■■□□ 2.9
TMEM259-208	ENST00000592052	USHBP1	Q8N6Y0	703 aa		33.2	■■■□□ 2.9
TMEM259-208	ENST00000592052	RGPD2	P0DJD1	1756 aa		33.2	■■■□□ 2.9
TMEM259-208	ENST00000592052	BARGIN	Q6ZT62	677 aa		33.19	■■■□□ 2.9
TMEM259-208	ENST00000592052	FAM98C	Q17RN3	349 aa	Known RBP	33.18	■■■□□ 2.9
TMEM259-208	ENST00000592052	U2SURP	O15042	1029 aa	Known RBP	33.17	■■■□□ 2.9
TMEM259-208	ENST00000592052	NCAPD2	Q15021	1401 aa		33.16	■■■□□ 2.9
TMEM259-208	ENST00000592052	RGPD1	P0DJD0	1748 aa		33.14	■■■□□ 2.9
TMEM259-208	ENST00000592052	ONECUT3	O60422	494 aa	Predicted RBP	33.13	■■■□□ 2.89
TMEM259-208	ENST00000592052	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.13	■■■□□ 2.89
TMEM259-208	ENST00000592052	IL2RB	P14784	551 aa		33.13	■■■□□ 2.89
TMEM259-208	ENST00000592052	SULT6B1	Q6IMI4	303 aa		33.12	■■■□□ 2.89
TMEM259-208	ENST00000592052	RAPGEF4	Q8WZA2	1011 aa		33.11	■■■□□ 2.89
TMEM259-208	ENST00000592052		A0A0G2JS52	829 aa		33.1	■■■□□ 2.89
TMEM259-208	ENST00000592052	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.1	■■■□□ 2.89
TMEM259-208	ENST00000592052	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.1	■■■□□ 2.89
TMEM259-208	ENST00000592052	MYT1	Q01538	1121 aa		33.1	■■■□□ 2.89
TMEM259-208	ENST00000592052	CCDC184	Q52MB2	194 aa		33.1	■■■□□ 2.89
TMEM259-208	ENST00000592052	MRS2	Q9HD23	443 aa		33.1	■■■□□ 2.89
TMEM259-208	ENST00000592052	DISP2	A7MBM2	1401 aa		33.09	■■■□□ 2.89
TMEM259-208	ENST00000592052	KDR	P35968	1356 aa		33.09	■■■□□ 2.89
TMEM259-208	ENST00000592052	AEBP1	Q8IUX7	1158 aa		33.09	■■■□□ 2.89
TMEM259-208	ENST00000592052	HMOX1	P09601	288 aa		33.08	■■■□□ 2.89
TMEM259-208	ENST00000592052	SEPT12	Q8IYM1	358 aa		33.07	■■■□□ 2.88
TMEM259-208	ENST00000592052	MIER1	Q8N108	512 aa		33.07	■■■□□ 2.88
TMEM259-208	ENST00000592052	TAT	P17735	454 aa	Predicted RBP	33.06	■■■□□ 2.88
TMEM259-208	ENST00000592052	WNK3	Q9BYP7	1800 aa		33.06	■■■□□ 2.88
TMEM259-208	ENST00000592052	THSD7A	Q9UPZ6	1657 aa		33.06	■■■□□ 2.88
TMEM259-208	ENST00000592052	WDR43	Q15061	677 aa	Known RBP eCLIP	33.06	■■■□□ 2.88	7e-8	■■□□□ 11.4
TMEM259-208	ENST00000592052	MEGF6	O75095	1541 aa		33.05	■■■□□ 2.88
TMEM259-208	ENST00000592052	CCER2	I3L3R5	266 aa		33.02	■■■□□ 2.88
TMEM259-208	ENST00000592052	OVOS2	A0A0G2JMS6	1433 aa		33.02	■■■□□ 2.88
TMEM259-208	ENST00000592052	RGS12	O14924	1447 aa		33.02	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms