RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 PER1O15534 1290 aaPredicted RBP22.1■■□□□ 1.13
PRKCSH-213ENST00000591510 RXRBP28702 533 aa22.1■■□□□ 1.13
PRKCSH-213ENST00000591510 GJD4Q96KN9 370 aaPredicted RBP22.09■■□□□ 1.13
PRKCSH-213ENST00000591510 SPATA31A5Q5VU36 1347 aa22.07■■□□□ 1.12
PRKCSH-213ENST00000591510 SPATA31A7Q8IWB4 1347 aa22.07■■□□□ 1.12
PRKCSH-213ENST00000591510 PEAK1Q9H792 1746 aa22.07■■□□□ 1.12
PRKCSH-213ENST00000591510 FBLN1P23142 703 aa22.07■■□□□ 1.12
PRKCSH-213ENST00000591510 NSD2O96028 1365 aa22.07■■□□□ 1.12
PRKCSH-213ENST00000591510 AMER1Q5JTC6 1135 aaPredicted RBP22.06■■□□□ 1.12
PRKCSH-213ENST00000591510 THSD7AQ9UPZ6 1657 aa22.06■■□□□ 1.12
PRKCSH-213ENST00000591510 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
PRKCSH-213ENST00000591510 ONECUT3O60422 494 aaPredicted RBP22.04■■□□□ 1.12
PRKCSH-213ENST00000591510 SPATA31A1Q5TZJ5 1347 aa22.04■■□□□ 1.12
PRKCSH-213ENST00000591510 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
PRKCSH-213ENST00000591510 LARP1Q6PKG0 1096 aaKnown RBP22.03■■□□□ 1.12
PRKCSH-213ENST00000591510 ZBTB7CA1YPR0 619 aa22.02■■□□□ 1.12
PRKCSH-213ENST00000591510 BLMP54132 1417 aaPredicted RBP22.02■■□□□ 1.12
PRKCSH-213ENST00000591510 NPC1L1Q9UHC9 1359 aa22.01■■□□□ 1.11
PRKCSH-213ENST00000591510 CRB1P82279 1406 aa22.01■■□□□ 1.11
PRKCSH-213ENST00000591510 IP6K1Q92551 441 aa22.01■■□□□ 1.11
PRKCSH-213ENST00000591510 STRN4Q9NRL3 753 aa22.01■■□□□ 1.11
PRKCSH-213ENST00000591510 ERBB3P21860 1342 aa22.01■■□□□ 1.11
PRKCSH-213ENST00000591510 WDR17Q8IZU2 1322 aa22.01■■□□□ 1.11
PRKCSH-213ENST00000591510 BRWD3Q6RI45 1802 aa22.01■■□□□ 1.11
PRKCSH-213ENST00000591510 RRS1Q15050 365 aaKnown RBP22■■□□□ 1.11
PRKCSH-213ENST00000591510 KNSTRNQ9Y448 316 aa22■■□□□ 1.11
PRKCSH-213ENST00000591510 MAP2P11137 1827 aaKnown RBP22■■□□□ 1.11
PRKCSH-213ENST00000591510 WNK3Q9BYP7 1800 aa22■■□□□ 1.11
PRKCSH-213ENST00000591510 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
PRKCSH-213ENST00000591510 SMG6Q86US8 1419 aaKnown RBP21.99■■□□□ 1.11
PRKCSH-213ENST00000591510 HOXC9P31274 260 aa21.98■■□□□ 1.11
PRKCSH-213ENST00000591510 FAM208AQ9UK61 1670 aaKnown RBP21.98■■□□□ 1.11
PRKCSH-213ENST00000591510 EP400Q96L91 3159 aa21.97■■□□□ 1.11
PRKCSH-213ENST00000591510 EMILIN1Q9Y6C2 1016 aa21.96■■□□□ 1.11
PRKCSH-213ENST00000591510 EVA1CP58658 441 aa21.95■■□□□ 1.1
PRKCSH-213ENST00000591510 BARGINQ6ZT62 677 aa21.95■■□□□ 1.1
PRKCSH-213ENST00000591510 CCDC9Q9Y3X0 531 aaKnown RBP21.95■■□□□ 1.1
PRKCSH-213ENST00000591510 FLT4P35916 1363 aa21.95■■□□□ 1.1
PRKCSH-213ENST00000591510 DISP2A7MBM2 1401 aa21.95■■□□□ 1.1
PRKCSH-213ENST00000591510 PARP4Q9UKK3 1724 aaKnown RBP21.94■■□□□ 1.1
PRKCSH-213ENST00000591510 FAM98CQ17RN3 349 aaKnown RBP21.94■■□□□ 1.1
PRKCSH-213ENST00000591510 POLKQ9UBT6 870 aa21.94■■□□□ 1.1
PRKCSH-213ENST00000591510 RGPD2P0DJD1 1756 aa21.94■■□□□ 1.1
PRKCSH-213ENST00000591510 INSRP06213 1382 aa21.93■■□□□ 1.1
PRKCSH-213ENST00000591510 SEPT12Q8IYM1 358 aa21.93■■□□□ 1.1
PRKCSH-213ENST00000591510 TCP11L2Q8N4U5 519 aa21.93■■□□□ 1.1
PRKCSH-213ENST00000591510 ANKRD24Q8TF21 1146 aa21.93■■□□□ 1.1
PRKCSH-213ENST00000591510 AMPHP49418 695 aa21.92■■□□□ 1.1
PRKCSH-213ENST00000591510 CARD10Q9BWT7 1032 aa21.92■■□□□ 1.1
PRKCSH-213ENST00000591510 THRAP3Q9Y2W1 955 aaKnown RBP21.92■■□□□ 1.1
PRKCSH-213ENST00000591510 LRRC37A3O60309 1634 aa21.91■■□□□ 1.1
PRKCSH-213ENST00000591510 SOCS7O14512 581 aa21.9■■□□□ 1.1
PRKCSH-213ENST00000591510 HSP90AB2PQ58FF8 381 aa21.9■■□□□ 1.1
PRKCSH-213ENST00000591510 TOM1L2Q6ZVM7 507 aa21.9■■□□□ 1.1
PRKCSH-213ENST00000591510 NCAPD2Q15021 1401 aa21.89■■□□□ 1.1
PRKCSH-213ENST00000591510 MORC1Q86VD1 984 aa21.89■■□□□ 1.09
PRKCSH-213ENST00000591510 USP35Q9P2H5 1018 aa21.89■■□□□ 1.09
PRKCSH-213ENST00000591510 TNNT2P45379 298 aaPredicted RBP21.88■■□□□ 1.09
PRKCSH-213ENST00000591510 CC2D1BQ5T0F9 858 aaKnown RBP21.87■■□□□ 1.09
PRKCSH-213ENST00000591510 CSB-PGBD3P0DP91 1061 aa21.86■■□□□ 1.09
PRKCSH-213ENST00000591510 NLRP2Q9NX02 1062 aa21.85■■□□□ 1.09
PRKCSH-213ENST00000591510 LTV1Q96GA3 475 aaPredicted RBP21.84■■□□□ 1.09
PRKCSH-213ENST00000591510 NBPF6Q5VWK0 638 aa21.83■■□□□ 1.09
PRKCSH-213ENST00000591510 NBPF4Q96M43 638 aa21.83■■□□□ 1.09
PRKCSH-213ENST00000591510 RGPD1P0DJD0 1748 aa21.81■■□□□ 1.08
PRKCSH-213ENST00000591510 KRT27Q7Z3Y8 459 aa21.81■■□□□ 1.08
PRKCSH-213ENST00000591510 COL3A1P02461 1466 aaPredicted RBP21.81■■□□□ 1.08
PRKCSH-213ENST00000591510 TNS2Q63HR2 1409 aa21.8■■□□□ 1.08
PRKCSH-213ENST00000591510 MEGF6O75095 1541 aa21.8■■□□□ 1.08
PRKCSH-213ENST00000591510 PARD3Q8TEW0 1356 aa21.8■■□□□ 1.08
PRKCSH-213ENST00000591510 PPM1GO15355 546 aaPredicted RBP21.8■■□□□ 1.08
PRKCSH-213ENST00000591510 DDX10Q13206 875 aaKnown RBP21.8■■□□□ 1.08
PRKCSH-213ENST00000591510 EIF4A2Q14240 407 aaKnown RBP21.8■■□□□ 1.08
PRKCSH-213ENST00000591510 CDCA7Q9BWT1 371 aaPredicted RBP21.8■■□□□ 1.08
PRKCSH-213ENST00000591510 SHANK3Q9BYB0 1731 aa21.8■■□□□ 1.08
PRKCSH-213ENST00000591510 UPF1Q92900 1129 aaKnown RBP eCLIP21.78■■□□□ 1.086e-15■■■■■ 63.6
PRKCSH-213ENST00000591510 A0A0G2JS52 829 aa21.77■■□□□ 1.08
PRKCSH-213ENST00000591510 MTHFSP49914 203 aa21.77■■□□□ 1.08
PRKCSH-213ENST00000591510 MYT1Q01538 1121 aa21.77■■□□□ 1.08
PRKCSH-213ENST00000591510 OVOS2A0A0G2JMS6 1433 aa21.77■■□□□ 1.08
PRKCSH-213ENST00000591510 IL2RBP14784 551 aa21.76■■□□□ 1.07
PRKCSH-213ENST00000591510 USHBP1Q8N6Y0 703 aa21.76■■□□□ 1.07
PRKCSH-213ENST00000591510 EYA1Q99502 592 aa21.76■■□□□ 1.07
PRKCSH-213ENST00000591510 ZNF316A6NFI3 1004 aaPredicted RBP21.75■■□□□ 1.07
PRKCSH-213ENST00000591510 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
PRKCSH-213ENST00000591510 BCL9O00512 1426 aa21.74■■□□□ 1.07
PRKCSH-213ENST00000591510 DDB1Q16531 1140 aa21.74■■□□□ 1.07
PRKCSH-213ENST00000591510 FAM182BQ5T319 152 aa21.74■■□□□ 1.07
PRKCSH-213ENST00000591510 PKD1L3Q7Z443 1732 aa21.74■■□□□ 1.07
PRKCSH-213ENST00000591510 IL13P35225 146 aa21.73■■□□□ 1.07
PRKCSH-213ENST00000591510 MARCH10Q8NA82 808 aaPredicted RBP21.73■■□□□ 1.07
PRKCSH-213ENST00000591510 TNS1Q9HBL0 1735 aaKnown RBP21.72■■□□□ 1.07
PRKCSH-213ENST00000591510 SBF2Q86WG5 1849 aa21.72■■□□□ 1.07
PRKCSH-213ENST00000591510 PPP2R1AP30153 589 aa21.72■■□□□ 1.07
PRKCSH-213ENST00000591510 CNGB1Q14028 1251 aaPredicted RBP21.72■■□□□ 1.07
PRKCSH-213ENST00000591510 KDRP35968 1356 aa21.7■■□□□ 1.06
PRKCSH-213ENST00000591510 PDE3BQ13370 1112 aa21.69■■□□□ 1.06
PRKCSH-213ENST00000591510 PLEKHG2Q9H7P9 1386 aa21.69■■□□□ 1.06
PRKCSH-213ENST00000591510 EXOC5O00471 708 aa21.68■■□□□ 1.06
PRKCSH-213ENST00000591510 FAM196AQ6ZSG2 479 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms