RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 AATKQ6ZMQ8 1374 aa15.99■□□□□ 0.15
VMP1-211ENST00000591315 EVA1CP58658 441 aa15.98■□□□□ 0.15
VMP1-211ENST00000591315 FAM98CQ17RN3 349 aaKnown RBP15.98■□□□□ 0.15
VMP1-211ENST00000591315 KCNH5Q8NCM2 988 aa15.98■□□□□ 0.15
VMP1-211ENST00000591315 PANK3Q9H999 370 aa15.98■□□□□ 0.15
VMP1-211ENST00000591315 BRWD3Q6RI45 1802 aa15.97■□□□□ 0.15
VMP1-211ENST00000591315 EP400Q96L91 3159 aa15.97■□□□□ 0.15
VMP1-211ENST00000591315 COG3Q96JB2 828 aa15.97■□□□□ 0.15
VMP1-211ENST00000591315 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
VMP1-211ENST00000591315 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
VMP1-211ENST00000591315 SEPT12Q8IYM1 358 aa15.96■□□□□ 0.15
VMP1-211ENST00000591315 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
VMP1-211ENST00000591315 LTN1O94822 1766 aa15.95■□□□□ 0.14
VMP1-211ENST00000591315 KIF20BQ96Q89 1820 aa15.95■□□□□ 0.14
VMP1-211ENST00000591315 ONECUT3O60422 494 aaPredicted RBP15.94■□□□□ 0.14
VMP1-211ENST00000591315 A0A0G2JS52 829 aa15.93■□□□□ 0.14
VMP1-211ENST00000591315 MYT1Q01538 1121 aa15.93■□□□□ 0.14
VMP1-211ENST00000591315 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
VMP1-211ENST00000591315 RRS1Q15050 365 aaKnown RBP15.92■□□□□ 0.14
VMP1-211ENST00000591315 MAP3K19Q56UN5 1328 aa15.92■□□□□ 0.14
VMP1-211ENST00000591315 CCDC7Q96M83 1385 aa15.91■□□□□ 0.14
VMP1-211ENST00000591315 FAM182BQ5T319 152 aa15.91■□□□□ 0.14
VMP1-211ENST00000591315 UPF1Q92900 1129 aaKnown RBP eCLIP15.91■□□□□ 0.14
VMP1-211ENST00000591315 TOM1L2Q6ZVM7 507 aa15.9■□□□□ 0.14
VMP1-211ENST00000591315 LTV1Q96GA3 475 aaPredicted RBP15.9■□□□□ 0.14
VMP1-211ENST00000591315 WDR17Q8IZU2 1322 aa15.9■□□□□ 0.14
VMP1-211ENST00000591315 THSD7AQ9UPZ6 1657 aa15.89■□□□□ 0.13
VMP1-211ENST00000591315 CRB1P82279 1406 aa15.89■□□□□ 0.13
VMP1-211ENST00000591315 CSB-PGBD3P0DP91 1061 aa15.89■□□□□ 0.13
VMP1-211ENST00000591315 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
VMP1-211ENST00000591315 CGNL1Q0VF96 1302 aa15.89■□□□□ 0.13
VMP1-211ENST00000591315 IP6K1Q92551 441 aa15.88■□□□□ 0.13
VMP1-211ENST00000591315 HOXC9P31274 260 aa15.87■□□□□ 0.13
VMP1-211ENST00000591315 TNNT2P45379 298 aaPredicted RBP15.87■□□□□ 0.13
VMP1-211ENST00000591315 AMPHP49418 695 aa15.87■□□□□ 0.13
VMP1-211ENST00000591315 KRT27Q7Z3Y8 459 aa15.87■□□□□ 0.13
VMP1-211ENST00000591315 ANKRD24Q8TF21 1146 aa15.87■□□□□ 0.13
VMP1-211ENST00000591315 PEAK1Q9H792 1746 aa15.87■□□□□ 0.13
VMP1-211ENST00000591315 BARGINQ6ZT62 677 aa15.86■□□□□ 0.13
VMP1-211ENST00000591315 EMILIN1Q9Y6C2 1016 aa15.86■□□□□ 0.13
VMP1-211ENST00000591315 ERBB3P21860 1342 aa15.86■□□□□ 0.13
VMP1-211ENST00000591315 ABCC6O95255 1503 aa15.85■□□□□ 0.13
VMP1-211ENST00000591315 CARD10Q9BWT7 1032 aa15.85■□□□□ 0.13
VMP1-211ENST00000591315 NLRP2Q9NX02 1062 aa15.85■□□□□ 0.13
VMP1-211ENST00000591315 RGPD2P0DJD1 1756 aa15.85■□□□□ 0.13
VMP1-211ENST00000591315 PER1O15534 1290 aaPredicted RBP15.84■□□□□ 0.13
VMP1-211ENST00000591315 HSP90AB2PQ58FF8 381 aa15.84■□□□□ 0.13
VMP1-211ENST00000591315 MAP2P11137 1827 aaKnown RBP15.84■□□□□ 0.13
VMP1-211ENST00000591315 ANKRD26Q9UPS8 1709 aa15.83■□□□□ 0.13
VMP1-211ENST00000591315 CNGB1Q14028 1251 aaPredicted RBP15.83■□□□□ 0.12
VMP1-211ENST00000591315 AMER1Q5JTC6 1135 aaPredicted RBP15.83■□□□□ 0.12
VMP1-211ENST00000591315 KNSTRNQ9Y448 316 aa15.83■□□□□ 0.12
VMP1-211ENST00000591315 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
VMP1-211ENST00000591315 THRAP3Q9Y2W1 955 aaKnown RBP15.82■□□□□ 0.12
VMP1-211ENST00000591315 BLMP54132 1417 aaPredicted RBP15.82■□□□□ 0.12
VMP1-211ENST00000591315 WNK3Q9BYP7 1800 aa15.81■□□□□ 0.12
VMP1-211ENST00000591315 POLKQ9UBT6 870 aa15.81■□□□□ 0.12
VMP1-211ENST00000591315 DISP2A7MBM2 1401 aa15.8■□□□□ 0.12
VMP1-211ENST00000591315 MORC1Q86VD1 984 aa15.8■□□□□ 0.12
VMP1-211ENST00000591315 USHBP1Q8N6Y0 703 aa15.8■□□□□ 0.12
VMP1-211ENST00000591315 PARP4Q9UKK3 1724 aaKnown RBP15.8■□□□□ 0.12
VMP1-211ENST00000591315 RTL1A6NKG5 1358 aa15.79■□□□□ 0.12
VMP1-211ENST00000591315 CC2D1BQ5T0F9 858 aaKnown RBP15.79■□□□□ 0.12
VMP1-211ENST00000591315 NBPF6Q5VWK0 638 aa15.79■□□□□ 0.12
VMP1-211ENST00000591315 NBPF4Q96M43 638 aa15.79■□□□□ 0.12
VMP1-211ENST00000591315 LRRC37A3O60309 1634 aa15.79■□□□□ 0.12
VMP1-211ENST00000591315 FLT4P35916 1363 aa15.78■□□□□ 0.12
VMP1-211ENST00000591315 PDE3BQ13370 1112 aa15.78■□□□□ 0.12
VMP1-211ENST00000591315 NSD2O96028 1365 aa15.77■□□□□ 0.12
VMP1-211ENST00000591315 INSRP06213 1382 aa15.77■□□□□ 0.12
VMP1-211ENST00000591315 DDB1Q16531 1140 aa15.77■□□□□ 0.12
VMP1-211ENST00000591315 MARCH10Q8NA82 808 aaPredicted RBP15.77■□□□□ 0.12
VMP1-211ENST00000591315 FAM208AQ9UK61 1670 aaKnown RBP15.76■□□□□ 0.11
VMP1-211ENST00000591315 DEFB132Q7Z7B7 95 aa15.76■□□□□ 0.11
VMP1-211ENST00000591315 TRIM37O94972 964 aa15.74■□□□□ 0.11
VMP1-211ENST00000591315 IL2RBP14784 551 aa15.74■□□□□ 0.11
VMP1-211ENST00000591315 PTF1AQ7RTS3 328 aa15.74■□□□□ 0.11
VMP1-211ENST00000591315 KIF24Q5T7B8 1368 aa15.74■□□□□ 0.11
VMP1-211ENST00000591315 CDCA7Q9BWT1 371 aaPredicted RBP15.73■□□□□ 0.11
VMP1-211ENST00000591315 MEGF6O75095 1541 aa15.73■□□□□ 0.11
VMP1-211ENST00000591315 EXOC5O00471 708 aa15.72■□□□□ 0.11
VMP1-211ENST00000591315 EIF4A2Q14240 407 aaKnown RBP15.72■□□□□ 0.11
VMP1-211ENST00000591315 FAM196AQ6ZSG2 479 aa15.72■□□□□ 0.11
VMP1-211ENST00000591315 KAT6BQ8WYB5 2073 aa15.72■□□□□ 0.11
VMP1-211ENST00000591315 TNS2Q63HR2 1409 aa15.71■□□□□ 0.11
VMP1-211ENST00000591315 ZEB1P37275 1124 aaPredicted RBP15.71■□□□□ 0.11
VMP1-211ENST00000591315 EYA1Q99502 592 aa15.71■□□□□ 0.11
VMP1-211ENST00000591315 SMG6Q86US8 1419 aaKnown RBP15.7■□□□□ 0.1
VMP1-211ENST00000591315 SBF2Q86WG5 1849 aa15.7■□□□□ 0.1
VMP1-211ENST00000591315 TNS1Q9HBL0 1735 aaKnown RBP15.69■□□□□ 0.1
VMP1-211ENST00000591315 MTHFSP49914 203 aa15.69■□□□□ 0.1
VMP1-211ENST00000591315 CCDC125Q86Z20 511 aa15.69■□□□□ 0.1
VMP1-211ENST00000591315 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
VMP1-211ENST00000591315 OVOS2A0A0G2JMS6 1433 aa15.68■□□□□ 0.1
VMP1-211ENST00000591315 NPC1L1Q9UHC9 1359 aa15.68■□□□□ 0.1
VMP1-211ENST00000591315 EN1Q05925 392 aaPredicted RBP15.68■□□□□ 0.1
VMP1-211ENST00000591315 DDX10Q13206 875 aaKnown RBP15.68■□□□□ 0.1
VMP1-211ENST00000591315 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
VMP1-211ENST00000591315 KCNQ2O43526 872 aa15.67■□□□□ 0.1
VMP1-211ENST00000591315 SF3B2Q13435 895 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms