RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097	SPATA31A5	Q5VU36	1347 aa		32.2	■■■□□ 2.74
CIRBP-231	ENST00000591097	SPATA31A7	Q8IWB4	1347 aa		32.2	■■■□□ 2.74
CIRBP-231	ENST00000591097	STRN4	Q9NRL3	753 aa		32.18	■■■□□ 2.74
CIRBP-231	ENST00000591097	CCDC9	Q9Y3X0	531 aa	Known RBP	32.17	■■■□□ 2.74
CIRBP-231	ENST00000591097	RGPD5	Q99666	1765 aa		32.16	■■■□□ 2.74
CIRBP-231	ENST00000591097	SOCS7	O14512	581 aa		32.16	■■■□□ 2.74
CIRBP-231	ENST00000591097	SPATA31A1	Q5TZJ5	1347 aa		32.15	■■■□□ 2.74
CIRBP-231	ENST00000591097	LARP1	Q6PKG0	1096 aa	Known RBP	32.15	■■■□□ 2.74
CIRBP-231	ENST00000591097	ONECUT3	O60422	494 aa	Predicted RBP	32.14	■■■□□ 2.74
CIRBP-231	ENST00000591097	FBLN1	P23142	703 aa		32.14	■■■□□ 2.74
CIRBP-231	ENST00000591097	ZEB1	P37275	1124 aa	Predicted RBP	32.14	■■■□□ 2.74
CIRBP-231	ENST00000591097	EVA1C	P58658	441 aa		32.14	■■■□□ 2.74
CIRBP-231	ENST00000591097	EP400	Q96L91	3159 aa		32.14	■■■□□ 2.74
CIRBP-231	ENST00000591097	ANKRD26	Q9UPS8	1709 aa		32.12	■■■□□ 2.73
CIRBP-231	ENST00000591097	MAP3K19	Q56UN5	1328 aa		32.11	■■■□□ 2.73
CIRBP-231	ENST00000591097	CRB1	P82279	1406 aa		32.1	■■■□□ 2.73
CIRBP-231	ENST00000591097	WDR17	Q8IZU2	1322 aa		32.08	■■■□□ 2.73
CIRBP-231	ENST00000591097	THSD7A	Q9UPZ6	1657 aa		32.08	■■■□□ 2.73
CIRBP-231	ENST00000591097	NSD2	O96028	1365 aa		32.07	■■■□□ 2.72
CIRBP-231	ENST00000591097	FAM98C	Q17RN3	349 aa	Known RBP	32.07	■■■□□ 2.72
CIRBP-231	ENST00000591097	BLM	P54132	1417 aa	Predicted RBP	32.07	■■■□□ 2.72
CIRBP-231	ENST00000591097	PER1	O15534	1290 aa	Predicted RBP	32.06	■■■□□ 2.72
CIRBP-231	ENST00000591097	RRS1	Q15050	365 aa	Known RBP	32.05	■■■□□ 2.72
CIRBP-231	ENST00000591097	IP6K1	Q92551	441 aa		32.05	■■■□□ 2.72
CIRBP-231	ENST00000591097	KNSTRN	Q9Y448	316 aa		32.05	■■■□□ 2.72
CIRBP-231	ENST00000591097	ERBB3	P21860	1342 aa		32.05	■■■□□ 2.72
CIRBP-231	ENST00000591097	SEPT12	Q8IYM1	358 aa		32.05	■■■□□ 2.72
CIRBP-231	ENST00000591097	RTL1	A6NKG5	1358 aa		32.04	■■■□□ 2.72
CIRBP-231	ENST00000591097	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.04	■■■□□ 2.72
CIRBP-231	ENST00000591097	BRWD3	Q6RI45	1802 aa		32.03	■■■□□ 2.72
CIRBP-231	ENST00000591097	USP35	Q9P2H5	1018 aa		32.03	■■■□□ 2.72
CIRBP-231	ENST00000591097	PEAK1	Q9H792	1746 aa		32.02	■■■□□ 2.72
CIRBP-231	ENST00000591097	BARGIN	Q6ZT62	677 aa		32.02	■■■□□ 2.72
CIRBP-231	ENST00000591097	TCP11L2	Q8N4U5	519 aa		32.02	■■■□□ 2.72
CIRBP-231	ENST00000591097	HOXC9	P31274	260 aa		32.01	■■■□□ 2.72
CIRBP-231	ENST00000591097	TOM1L2	Q6ZVM7	507 aa		32	■■■□□ 2.71
CIRBP-231	ENST00000591097	THRAP3	Q9Y2W1	955 aa	Known RBP	32	■■■□□ 2.71
CIRBP-231	ENST00000591097	KIF24	Q5T7B8	1368 aa		32	■■■□□ 2.71
CIRBP-231	ENST00000591097	AMPH	P49418	695 aa		31.99	■■■□□ 2.71
CIRBP-231	ENST00000591097	ANKRD24	Q8TF21	1146 aa		31.98	■■■□□ 2.71
CIRBP-231	ENST00000591097	CARD10	Q9BWT7	1032 aa		31.97	■■■□□ 2.71
CIRBP-231	ENST00000591097	CSB-PGBD3	P0DP91	1061 aa		31.96	■■■□□ 2.71
CIRBP-231	ENST00000591097	EMILIN1	Q9Y6C2	1016 aa		31.95	■■■□□ 2.71
CIRBP-231	ENST00000591097	FLT4	P35916	1363 aa		31.95	■■■□□ 2.7
CIRBP-231	ENST00000591097	MAP2	P11137	1827 aa	Known RBP	31.94	■■■□□ 2.7
CIRBP-231	ENST00000591097	FAM208A	Q9UK61	1670 aa	Known RBP	31.94	■■■□□ 2.7
CIRBP-231	ENST00000591097	WNK3	Q9BYP7	1800 aa		31.94	■■■□□ 2.7
CIRBP-231	ENST00000591097		A0A0G2JS52	829 aa		31.93	■■■□□ 2.7
CIRBP-231	ENST00000591097	MYT1	Q01538	1121 aa		31.93	■■■□□ 2.7
CIRBP-231	ENST00000591097	INSR	P06213	1382 aa		31.93	■■■□□ 2.7
CIRBP-231	ENST00000591097	NPC1L1	Q9UHC9	1359 aa		31.93	■■■□□ 2.7
CIRBP-231	ENST00000591097	POLK	Q9UBT6	870 aa		31.92	■■■□□ 2.7
CIRBP-231	ENST00000591097	PARP4	Q9UKK3	1724 aa	Known RBP	31.92	■■■□□ 2.7
CIRBP-231	ENST00000591097	TNNT2	P45379	298 aa	Predicted RBP	31.91	■■■□□ 2.7
CIRBP-231	ENST00000591097	DISP2	A7MBM2	1401 aa		31.91	■■■□□ 2.7
CIRBP-231	ENST00000591097	HSP90AB2P	Q58FF8	381 aa		31.9	■■■□□ 2.7
CIRBP-231	ENST00000591097	MORC1	Q86VD1	984 aa		31.9	■■■□□ 2.7
CIRBP-231	ENST00000591097	KRT27	Q7Z3Y8	459 aa		31.9	■■■□□ 2.7
CIRBP-231	ENST00000591097	SMG6	Q86US8	1419 aa	Known RBP	31.89	■■■□□ 2.7
CIRBP-231	ENST00000591097	NLRP2	Q9NX02	1062 aa		31.89	■■■□□ 2.7
CIRBP-231	ENST00000591097	LTV1	Q96GA3	475 aa	Predicted RBP	31.88	■■■□□ 2.69
CIRBP-231	ENST00000591097	LRRC37A3	O60309	1634 aa		31.87	■■■□□ 2.69
CIRBP-231	ENST00000591097	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.86	■■■□□ 2.69
CIRBP-231	ENST00000591097	RGPD2	P0DJD1	1756 aa		31.85	■■■□□ 2.69
CIRBP-231	ENST00000591097	PPM1G	O15355	546 aa	Predicted RBP	31.84	■■■□□ 2.69
CIRBP-231	ENST00000591097	CC2D1B	Q5T0F9	858 aa	Known RBP	31.84	■■■□□ 2.69
CIRBP-231	ENST00000591097	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.84	■■■□□ 2.69
CIRBP-231	ENST00000591097	NBPF6	Q5VWK0	638 aa		31.79	■■■□□ 2.68
CIRBP-231	ENST00000591097	NBPF4	Q96M43	638 aa		31.79	■■■□□ 2.68
CIRBP-231	ENST00000591097	FAM182B	Q5T319	152 aa		31.77	■■■□□ 2.68
CIRBP-231	ENST00000591097	DDB1	Q16531	1140 aa		31.76	■■■□□ 2.68
CIRBP-231	ENST00000591097	IL2RB	P14784	551 aa		31.75	■■■□□ 2.67
CIRBP-231	ENST00000591097	PDE3B	Q13370	1112 aa		31.75	■■■□□ 2.67
CIRBP-231	ENST00000591097	NCAPD2	Q15021	1401 aa		31.75	■■■□□ 2.67
CIRBP-231	ENST00000591097	TNS2	Q63HR2	1409 aa		31.75	■■■□□ 2.67
CIRBP-231	ENST00000591097	MEGF6	O75095	1541 aa		31.71	■■■□□ 2.67
CIRBP-231	ENST00000591097	EIF4A2	Q14240	407 aa	Known RBP	31.71	■■■□□ 2.67
CIRBP-231	ENST00000591097	USHBP1	Q8N6Y0	703 aa		31.7	■■■□□ 2.67
CIRBP-231	ENST00000591097	CNGB1	Q14028	1251 aa	Predicted RBP	31.7	■■■□□ 2.66
CIRBP-231	ENST00000591097	EXOC5	O00471	708 aa		31.68	■■■□□ 2.66
CIRBP-231	ENST00000591097	MTHFS	P49914	203 aa		31.68	■■■□□ 2.66
CIRBP-231	ENST00000591097	FAM196A	Q6ZSG2	479 aa		31.68	■■■□□ 2.66
CIRBP-231	ENST00000591097	MARCH10	Q8NA82	808 aa	Predicted RBP	31.68	■■■□□ 2.66
CIRBP-231	ENST00000591097	OVOS2	A0A0G2JMS6	1433 aa		31.67	■■■□□ 2.66
CIRBP-231	ENST00000591097	DDX10	Q13206	875 aa	Known RBP	31.67	■■■□□ 2.66
CIRBP-231	ENST00000591097	EYA1	Q99502	592 aa		31.67	■■■□□ 2.66
CIRBP-231	ENST00000591097	CCDC125	Q86Z20	511 aa		31.66	■■■□□ 2.66
CIRBP-231	ENST00000591097	BCL9	O00512	1426 aa		31.65	■■■□□ 2.66
CIRBP-231	ENST00000591097	SHANK3	Q9BYB0	1731 aa		31.63	■■■□□ 2.65
CIRBP-231	ENST00000591097	IGSF1	Q8N6C5	1336 aa		31.63	■■■□□ 2.65
CIRBP-231	ENST00000591097	RGPD1	P0DJD0	1748 aa		31.61	■■■□□ 2.65
CIRBP-231	ENST00000591097	TNS1	Q9HBL0	1735 aa	Known RBP	31.61	■■■□□ 2.65
CIRBP-231	ENST00000591097	RAPGEF4	Q8WZA2	1011 aa		31.6	■■■□□ 2.65
CIRBP-231	ENST00000591097	PARD3	Q8TEW0	1356 aa		31.6	■■■□□ 2.65
CIRBP-231	ENST00000591097	COL3A1	P02461	1466 aa	Predicted RBP	31.6	■■■□□ 2.65
CIRBP-231	ENST00000591097	IL13	P35225	146 aa		31.59	■■■□□ 2.65
CIRBP-231	ENST00000591097	SBF2	Q86WG5	1849 aa		31.58	■■■□□ 2.65
CIRBP-231	ENST00000591097	TAT	P17735	454 aa	Predicted RBP	31.56	■■■□□ 2.64
CIRBP-231	ENST00000591097	PPP2R1A	P30153	589 aa		31.56	■■■□□ 2.64
CIRBP-231	ENST00000591097	ZCRB1	Q8TBF4	217 aa	Known RBP	31.56	■■■□□ 2.64

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