RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 IGF1RP08069 1367 aa12.24□□□□□ -0.45
NEDD4L-230ENST00000590638 PDIA4P13667 645 aaKnown RBP12.24□□□□□ -0.45
NEDD4L-230ENST00000590638 ERICH3Q5RHP9 1530 aa12.24□□□□□ -0.45
NEDD4L-230ENST00000590638 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
NEDD4L-230ENST00000590638 ABCA5Q8WWZ7 1642 aa12.23□□□□□ -0.45
NEDD4L-230ENST00000590638 AGERQ15109 404 aa12.23□□□□□ -0.45
NEDD4L-230ENST00000590638 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
NEDD4L-230ENST00000590638 PCDHB9Q9Y5E1 797 aa12.23□□□□□ -0.45
NEDD4L-230ENST00000590638 TNIKQ9UKE5 1360 aa12.22□□□□□ -0.45
NEDD4L-230ENST00000590638 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-230ENST00000590638 GGCXP38435 758 aa12.22□□□□□ -0.45
NEDD4L-230ENST00000590638 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-230ENST00000590638 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.45
NEDD4L-230ENST00000590638 LMOD1P29536 600 aaPredicted RBP12.21□□□□□ -0.45
NEDD4L-230ENST00000590638 TFIP11Q9UBB9 837 aaKnown RBP12.21□□□□□ -0.45
NEDD4L-230ENST00000590638 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.46
NEDD4L-230ENST00000590638 TDRD9Q8NDG6 1382 aaKnown RBP12.2□□□□□ -0.46
NEDD4L-230ENST00000590638 ZBTB24O43167 697 aaPredicted RBP12.2□□□□□ -0.46
NEDD4L-230ENST00000590638 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
NEDD4L-230ENST00000590638 SPNS2Q8IVW8 549 aa12.2□□□□□ -0.46
NEDD4L-230ENST00000590638 PBXIP1Q96AQ6 731 aa12.2□□□□□ -0.46
NEDD4L-230ENST00000590638 CUL7Q14999 1698 aa12.19□□□□□ -0.46
NEDD4L-230ENST00000590638 CARMIL1Q5VZK9 1371 aa12.19□□□□□ -0.46
NEDD4L-230ENST00000590638 MAGEB6P1A0A0J9YX57 407 aa12.19□□□□□ -0.46
NEDD4L-230ENST00000590638 LINC01559Q495D7 138 aa12.19□□□□□ -0.46
NEDD4L-230ENST00000590638 BAP1Q92560 729 aa12.19□□□□□ -0.46
NEDD4L-230ENST00000590638 CARD14Q9BXL6 1004 aa12.19□□□□□ -0.46
NEDD4L-230ENST00000590638 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
NEDD4L-230ENST00000590638 ADAM32Q8TC27 787 aa12.18□□□□□ -0.46
NEDD4L-230ENST00000590638 UCN2Q96RP3 112 aa12.18□□□□□ -0.46
NEDD4L-230ENST00000590638 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
NEDD4L-230ENST00000590638 BPHLQ86WA6 291 aaPredicted RBP12.17□□□□□ -0.46
NEDD4L-230ENST00000590638 DZIP3Q86Y13 1208 aaKnown RBP12.17□□□□□ -0.46
NEDD4L-230ENST00000590638 PBRM1Q86U86 1689 aa12.16□□□□□ -0.46
NEDD4L-230ENST00000590638 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.16□□□□□ -0.46
NEDD4L-230ENST00000590638 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
NEDD4L-230ENST00000590638 PPEF1O14829 653 aaPredicted RBP12.15□□□□□ -0.46
NEDD4L-230ENST00000590638 ATP9BO43861 1147 aa12.15□□□□□ -0.46
NEDD4L-230ENST00000590638 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
NEDD4L-230ENST00000590638 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.472e-10■■■□□ 16
NEDD4L-230ENST00000590638 GRIN2BQ13224 1484 aa12.14□□□□□ -0.47
NEDD4L-230ENST00000590638 SKIP12755 728 aa12.14□□□□□ -0.47
NEDD4L-230ENST00000590638 PDE4CQ08493 712 aa12.14□□□□□ -0.47
NEDD4L-230ENST00000590638 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
NEDD4L-230ENST00000590638 ZNF511Q8NB15 262 aa12.14□□□□□ -0.47
NEDD4L-230ENST00000590638 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
NEDD4L-230ENST00000590638 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
NEDD4L-230ENST00000590638 CEP162Q5TB80 1403 aa12.12□□□□□ -0.47
NEDD4L-230ENST00000590638 MMRN1Q13201 1228 aa12.12□□□□□ -0.47
NEDD4L-230ENST00000590638 RNF135Q8IUD6 432 aa12.12□□□□□ -0.47
NEDD4L-230ENST00000590638 RETREG2Q8NC44 543 aa12.12□□□□□ -0.47
NEDD4L-230ENST00000590638 NFATC2IPQ8NCF5 419 aa12.12□□□□□ -0.47
NEDD4L-230ENST00000590638 OCSTAMPQ9BR26 566 aa12.12□□□□□ -0.47
NEDD4L-230ENST00000590638 CEP126Q9P2H0 1117 aa12.12□□□□□ -0.47
NEDD4L-230ENST00000590638 EIF4G3O43432 1585 aaKnown RBP12.12□□□□□ -0.47
NEDD4L-230ENST00000590638 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
NEDD4L-230ENST00000590638 PIK3CDO00329 1044 aa12.11□□□□□ -0.47
NEDD4L-230ENST00000590638 CSB-PGBD3P0DP91 1061 aa12.11□□□□□ -0.47
NEDD4L-230ENST00000590638 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
NEDD4L-230ENST00000590638 ANKLE1Q8NAG6 615 aa12.1□□□□□ -0.47
NEDD4L-230ENST00000590638 FOXJ1Q92949 421 aa12.1□□□□□ -0.47
NEDD4L-230ENST00000590638 CDCA8Q53HL2 280 aa12.09□□□□□ -0.47
NEDD4L-230ENST00000590638 VRTNQ9H8Y1 702 aa12.09□□□□□ -0.47
NEDD4L-230ENST00000590638 FHAD1B1AJZ9 1412 aa12.09□□□□□ -0.47
NEDD4L-230ENST00000590638 SH3RF1Q7Z6J0 888 aa12.08□□□□□ -0.48
NEDD4L-230ENST00000590638 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.08□□□□□ -0.48
NEDD4L-230ENST00000590638 USP17L3A6NCW0 530 aa12.07□□□□□ -0.48
NEDD4L-230ENST00000590638 USP17L4A6NCW7 530 aa12.07□□□□□ -0.48
NEDD4L-230ENST00000590638 USP17L5A8MUK1 530 aa12.07□□□□□ -0.48
NEDD4L-230ENST00000590638 ADAMTS12P58397 1594 aa12.07□□□□□ -0.48
NEDD4L-230ENST00000590638 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
NEDD4L-230ENST00000590638 USP17L2Q6R6M4 530 aa12.07□□□□□ -0.48
NEDD4L-230ENST00000590638 USP17L1Q7RTZ2 530 aa12.07□□□□□ -0.48
NEDD4L-230ENST00000590638 CLIP1P30622 1438 aa12.06□□□□□ -0.48
NEDD4L-230ENST00000590638 SH3BP2P78314 561 aa12.06□□□□□ -0.48
NEDD4L-230ENST00000590638 TRIM32Q13049 653 aa12.06□□□□□ -0.48
NEDD4L-230ENST00000590638 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
NEDD4L-230ENST00000590638 NBPF20Q3BBV1 942 aa12.05□□□□□ -0.48
NEDD4L-230ENST00000590638 RNF20Q5VTR2 975 aa12.05□□□□□ -0.48
NEDD4L-230ENST00000590638 DEPDC4Q8N2C3 294 aa12.05□□□□□ -0.48
NEDD4L-230ENST00000590638 FAM174AQ8TBP5 190 aa12.05□□□□□ -0.48
NEDD4L-230ENST00000590638 MAGI1Q96QZ7 1491 aaPredicted RBP12.05□□□□□ -0.48
NEDD4L-230ENST00000590638 CTTNBP2Q8WZ74 1663 aa12.05□□□□□ -0.48
NEDD4L-230ENST00000590638 SNAPC4Q5SXM2 1469 aa12.04□□□□□ -0.48
NEDD4L-230ENST00000590638 PLPP7Q8NBV4 271 aa12.04□□□□□ -0.48
NEDD4L-230ENST00000590638 TRAIPQ9BWF2 469 aa12.04□□□□□ -0.48
NEDD4L-230ENST00000590638 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
NEDD4L-230ENST00000590638 ZBTB7CA1YPR0 619 aa12.03□□□□□ -0.48
NEDD4L-230ENST00000590638 LZTS3O60299 673 aaPredicted RBP12.03□□□□□ -0.48
NEDD4L-230ENST00000590638 CD2BP2O95400 341 aaKnown RBP12.03□□□□□ -0.48
NEDD4L-230ENST00000590638 EML3Q32P44 896 aa12.03□□□□□ -0.48
NEDD4L-230ENST00000590638 MAP7D1Q3KQU3 841 aa12.03□□□□□ -0.48
NEDD4L-230ENST00000590638 C4orf48Q5BLP8 95 aa12.03□□□□□ -0.48
NEDD4L-230ENST00000590638 PLEKHM2Q8IWE5 1019 aa12.03□□□□□ -0.48
NEDD4L-230ENST00000590638 RPIAP49247 311 aa12.02□□□□□ -0.49
NEDD4L-230ENST00000590638 WNT7BP56706 349 aa12.02□□□□□ -0.49
NEDD4L-230ENST00000590638 NCOA4Q13772 614 aa12.02□□□□□ -0.49
NEDD4L-230ENST00000590638 DOLKQ9UPQ8 538 aa12.02□□□□□ -0.49
NEDD4L-230ENST00000590638 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-230ENST00000590638 ATG7O95352 703 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms