RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 MARCH10Q8NA82 808 aaPredicted RBP19.96■□□□□ 0.79
LSM12-203ENST00000590563 DDB1Q16531 1140 aa19.95■□□□□ 0.78
LSM12-203ENST00000590563 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
LSM12-203ENST00000590563 NUDT16Q96DE0 195 aaKnown RBP19.94■□□□□ 0.78
LSM12-203ENST00000590563 AKAP12Q02952 1782 aa19.93■□□□□ 0.78
LSM12-203ENST00000590563 ACEP12821 1306 aa19.91■□□□□ 0.78
LSM12-203ENST00000590563 GCP02774 474 aa19.9■□□□□ 0.78
LSM12-203ENST00000590563 COL24A1Q17RW2 1714 aa19.9■□□□□ 0.78
LSM12-203ENST00000590563 ARHGEF28Q8N1W1 1705 aaKnown RBP19.9■□□□□ 0.78
LSM12-203ENST00000590563 MPHOSPH9Q99550 1183 aa19.89■□□□□ 0.77
LSM12-203ENST00000590563 ABTB2Q8N961 1025 aa19.88■□□□□ 0.77
LSM12-203ENST00000590563 COL18A1P39060 1754 aa19.88■□□□□ 0.77
LSM12-203ENST00000590563 NHSQ6T4R5 1651 aa19.87■□□□□ 0.77
LSM12-203ENST00000590563 GOLGB1Q14789 3259 aaKnown RBP19.87■□□□□ 0.77
LSM12-203ENST00000590563 ATP10DQ9P241 1426 aa19.87■□□□□ 0.77
LSM12-203ENST00000590563 HSPA6P17066 643 aa19.87■□□□□ 0.77
LSM12-203ENST00000590563 ZNF827Q17R98 1081 aa19.87■□□□□ 0.77
LSM12-203ENST00000590563 SLIT3O75094 1523 aa19.86■□□□□ 0.77
LSM12-203ENST00000590563 NLGN2Q8NFZ4 835 aa19.85■□□□□ 0.77
LSM12-203ENST00000590563 PELP1Q8IZL8 1130 aaKnown RBP19.84■□□□□ 0.77
LSM12-203ENST00000590563 PLEKHG3A1L390 1219 aa19.83■□□□□ 0.77
LSM12-203ENST00000590563 YBX3P16989 372 aaKnown RBP eCLIP19.83■□□□□ 0.77
LSM12-203ENST00000590563 TOM1L2Q6ZVM7 507 aa19.83■□□□□ 0.77
LSM12-203ENST00000590563 WDR17Q8IZU2 1322 aa19.82■□□□□ 0.76
LSM12-203ENST00000590563 NLRP13Q86W25 1043 aa19.82■□□□□ 0.76
LSM12-203ENST00000590563 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
LSM12-203ENST00000590563 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
LSM12-203ENST00000590563 QSER1Q2KHR3 1735 aa19.81■□□□□ 0.76
LSM12-203ENST00000590563 TNS2Q63HR2 1409 aa19.8■□□□□ 0.76
LSM12-203ENST00000590563 CDCA7Q9BWT1 371 aaPredicted RBP19.8■□□□□ 0.76
LSM12-203ENST00000590563 AXIN2Q9Y2T1 843 aa19.8■□□□□ 0.76
LSM12-203ENST00000590563 CCDC61Q9Y6R9 512 aa19.8■□□□□ 0.76
LSM12-203ENST00000590563 ADCY9O60503 1353 aa19.8■□□□□ 0.76
LSM12-203ENST00000590563 ZBTB7CA1YPR0 619 aa19.79■□□□□ 0.76
LSM12-203ENST00000590563 LRRC4BQ9NT99 713 aa19.78■□□□□ 0.76
LSM12-203ENST00000590563 TRPM1Q7Z4N2 1603 aa19.77■□□□□ 0.76
LSM12-203ENST00000590563 AKT1S1Q96B36 256 aa19.77■□□□□ 0.76
LSM12-203ENST00000590563 CPSF1Q10570 1443 aaKnown RBP19.76■□□□□ 0.75
LSM12-203ENST00000590563 ABCC6O95255 1503 aa19.76■□□□□ 0.75
LSM12-203ENST00000590563 BTAF1O14981 1849 aa19.76■□□□□ 0.75
LSM12-203ENST00000590563 TUBGCP6Q96RT7 1819 aa19.76■□□□□ 0.75
LSM12-203ENST00000590563 SLC16A10Q8TF71 515 aa19.75■□□□□ 0.75
LSM12-203ENST00000590563 PNPLA7Q6ZV29 1317 aa19.75■□□□□ 0.75
LSM12-203ENST00000590563 PIK3C2AO00443 1686 aa19.75■□□□□ 0.75
LSM12-203ENST00000590563 GRIN3BO60391 1043 aa19.74■□□□□ 0.75
LSM12-203ENST00000590563 ACSBG1Q96GR2 724 aa19.74■□□□□ 0.75
LSM12-203ENST00000590563 CARD10Q9BWT7 1032 aa19.74■□□□□ 0.75
LSM12-203ENST00000590563 GPBP1L1Q9HC44 474 aaPredicted RBP19.74■□□□□ 0.75
LSM12-203ENST00000590563 BRD4O60885 1362 aaPredicted RBP19.73■□□□□ 0.75
LSM12-203ENST00000590563 POLD1P28340 1107 aa19.73■□□□□ 0.75
LSM12-203ENST00000590563 USP6P35125 1406 aa19.73■□□□□ 0.75
LSM12-203ENST00000590563 PPIP5K1Q6PFW1 1433 aa19.73■□□□□ 0.75
LSM12-203ENST00000590563 EXOC5O00471 708 aa19.72■□□□□ 0.75
LSM12-203ENST00000590563 RGPD5Q99666 1765 aa19.72■□□□□ 0.75
LSM12-203ENST00000590563 NLRP6P59044 892 aa19.69■□□□□ 0.74
LSM12-203ENST00000590563 ARHGEF25Q86VW2 580 aa19.68■□□□□ 0.74
LSM12-203ENST00000590563 ZNF526Q8TF50 670 aaPredicted RBP19.68■□□□□ 0.74
LSM12-203ENST00000590563 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
LSM12-203ENST00000590563 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
LSM12-203ENST00000590563 DNAJC5GQ8N7S2 189 aa19.66■□□□□ 0.74
LSM12-203ENST00000590563 KIF3CO14782 793 aa19.65■□□□□ 0.74
LSM12-203ENST00000590563 NFAT5O94916 1531 aa19.65■□□□□ 0.74
LSM12-203ENST00000590563 CSB-PGBD3P0DP91 1061 aa19.64■□□□□ 0.73
LSM12-203ENST00000590563 DCAF11Q8TEB1 546 aa19.64■□□□□ 0.73
LSM12-203ENST00000590563 QRICH2Q9H0J4 1663 aa19.63■□□□□ 0.73
LSM12-203ENST00000590563 SLC27A3Q5K4L6 730 aa19.62■□□□□ 0.73
LSM12-203ENST00000590563 APLP1P51693 650 aa19.61■□□□□ 0.73
LSM12-203ENST00000590563 COL13A1Q5TAT6 717 aaPredicted RBP19.61■□□□□ 0.73
LSM12-203ENST00000590563 KCNQ4P56696 695 aa19.6■□□□□ 0.73
LSM12-203ENST00000590563 TFCP2L1Q9NZI6 479 aa19.6■□□□□ 0.73
LSM12-203ENST00000590563 CABP2Q9NPB3 220 aa19.59■□□□□ 0.73
LSM12-203ENST00000590563 CAPN15O75808 1086 aa19.58■□□□□ 0.72
LSM12-203ENST00000590563 SRPK2P78362 688 aaKnown RBP19.58■□□□□ 0.72
LSM12-203ENST00000590563 LY75O60449 1722 aa19.58■□□□□ 0.72
LSM12-203ENST00000590563 CABP1Q9NZU7 370 aa19.57■□□□□ 0.72
LSM12-203ENST00000590563 STAC3Q96MF2 364 aa19.56■□□□□ 0.72
LSM12-203ENST00000590563 SOX12O15370 315 aa19.55■□□□□ 0.72
LSM12-203ENST00000590563 COL23A1Q86Y22 540 aaPredicted RBP19.55■□□□□ 0.72
LSM12-203ENST00000590563 KCNH5Q8NCM2 988 aa19.55■□□□□ 0.72
LSM12-203ENST00000590563 NSD2O96028 1365 aa19.55■□□□□ 0.72
LSM12-203ENST00000590563 ERBB3P21860 1342 aa19.54■□□□□ 0.72
LSM12-203ENST00000590563 IL2RBP14784 551 aa19.54■□□□□ 0.72
LSM12-203ENST00000590563 MSL1Q68DK7 614 aa19.54■□□□□ 0.72
LSM12-203ENST00000590563 CD2APQ9Y5K6 639 aa19.54■□□□□ 0.72
LSM12-203ENST00000590563 WDR90Q96KV7 1748 aa19.54■□□□□ 0.72
LSM12-203ENST00000590563 PRELPP51888 382 aa19.53■□□□□ 0.72
LSM12-203ENST00000590563 CICQ96RK0 1608 aaPredicted RBP19.53■□□□□ 0.72
LSM12-203ENST00000590563 KIAA1210Q9ULL0 1709 aa19.53■□□□□ 0.72
LSM12-203ENST00000590563 TTC21BQ7Z4L5 1316 aa19.52■□□□□ 0.72
LSM12-203ENST00000590563 DOT1LQ8TEK3 1739 aa19.51■□□□□ 0.71
LSM12-203ENST00000590563 JMYQ8N9B5 988 aa19.49■□□□□ 0.71
LSM12-203ENST00000590563 NLRP2Q9NX02 1062 aa19.49■□□□□ 0.71
LSM12-203ENST00000590563 CENPJQ9HC77 1338 aaPredicted RBP19.48■□□□□ 0.71
LSM12-203ENST00000590563 ANKRD36BQ8N2N9 1353 aa19.47■□□□□ 0.71
LSM12-203ENST00000590563 MSH5O43196 834 aa19.47■□□□□ 0.71
LSM12-203ENST00000590563 TOMM70O94826 608 aa19.47■□□□□ 0.71
LSM12-203ENST00000590563 NBPF1Q3BBV0 1214 aa19.47■□□□□ 0.71
LSM12-203ENST00000590563 TNS4Q8IZW8 715 aa19.47■□□□□ 0.71
LSM12-203ENST00000590563 IGSF1Q8N6C5 1336 aa19.47■□□□□ 0.71
LSM12-203ENST00000590563 USP54Q70EL1 1684 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms