RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 EIF4A2Q14240 407 aaKnown RBP23.58■■□□□ 1.37
TMED1-205ENST00000589638 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.37
TMED1-205ENST00000589638 U2AF1L5P0DN76 240 aaPredicted RBP23.57■■□□□ 1.36
TMED1-205ENST00000589638 HSPA1LP34931 641 aa23.57■■□□□ 1.36
TMED1-205ENST00000589638 U2AF1Q01081 240 aaKnown RBP eCLIP23.57■■□□□ 1.36
TMED1-205ENST00000589638 CHRNA2Q15822 529 aa23.57■■□□□ 1.36
TMED1-205ENST00000589638 SHPRHQ149N8 1683 aa23.57■■□□□ 1.36
TMED1-205ENST00000589638 LTN1O94822 1766 aa23.56■■□□□ 1.36
TMED1-205ENST00000589638 CPDO75976 1380 aa23.55■■□□□ 1.36
TMED1-205ENST00000589638 PRDM11Q9NQV5 511 aa23.55■■□□□ 1.36
TMED1-205ENST00000589638 COL22A1Q8NFW1 1626 aaPredicted RBP23.55■■□□□ 1.36
TMED1-205ENST00000589638 ABCA3Q99758 1704 aa23.54■■□□□ 1.36
TMED1-205ENST00000589638 JCADQ9P266 1359 aa23.53■■□□□ 1.36
TMED1-205ENST00000589638 SENP3-EIF4A1A0A087X0R7 540 aa23.52■■□□□ 1.36
TMED1-205ENST00000589638 NUTM2BA6NNL0 878 aaPredicted RBP23.52■■□□□ 1.36
TMED1-205ENST00000589638 NUTM2EB1AL46 878 aaPredicted RBP23.52■■□□□ 1.36
TMED1-205ENST00000589638 NUTM2AQ8IVF1 878 aaPredicted RBP23.52■■□□□ 1.36
TMED1-205ENST00000589638 CCDC146Q8IYE0 955 aa23.52■■□□□ 1.36
TMED1-205ENST00000589638 AXIN2Q9Y2T1 843 aa23.52■■□□□ 1.36
TMED1-205ENST00000589638 ANKRD24Q8TF21 1146 aa23.5■■□□□ 1.35
TMED1-205ENST00000589638 BLMP54132 1417 aaPredicted RBP23.5■■□□□ 1.35
TMED1-205ENST00000589638 ADAMTS2O95450 1211 aa23.49■■□□□ 1.35
TMED1-205ENST00000589638 HMOX1P09601 288 aa23.49■■□□□ 1.35
TMED1-205ENST00000589638 HNRNPUQ00839 825 aaKnown RBP eCLIP23.49■■□□□ 1.35
TMED1-205ENST00000589638 FAM83GA6ND36 823 aa23.47■■□□□ 1.35
TMED1-205ENST00000589638 EYA1Q99502 592 aa23.46■■□□□ 1.35
TMED1-205ENST00000589638 CSB-PGBD3P0DP91 1061 aa23.45■■□□□ 1.34
TMED1-205ENST00000589638 SULT6B1Q6IMI4 303 aa23.45■■□□□ 1.34
TMED1-205ENST00000589638 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
TMED1-205ENST00000589638 ABCC6O95255 1503 aa23.44■■□□□ 1.34
TMED1-205ENST00000589638 USHBP1Q8N6Y0 703 aa23.44■■□□□ 1.34
TMED1-205ENST00000589638 COL18A1P39060 1754 aa23.44■■□□□ 1.34
TMED1-205ENST00000589638 ERBB3P21860 1342 aa23.43■■□□□ 1.34
TMED1-205ENST00000589638 IGSF1Q8N6C5 1336 aa23.43■■□□□ 1.34
TMED1-205ENST00000589638 RUNDC1Q96C34 613 aa23.43■■□□□ 1.34
TMED1-205ENST00000589638 RSPH6AQ9H0K4 717 aa23.43■■□□□ 1.34
TMED1-205ENST00000589638 FCHSD2O94868 740 aa23.42■■□□□ 1.34
TMED1-205ENST00000589638 PRKAR2BP31323 418 aa23.42■■□□□ 1.34
TMED1-205ENST00000589638 NBPF6Q5VWK0 638 aa23.42■■□□□ 1.34
TMED1-205ENST00000589638 NBPF4Q96M43 638 aa23.42■■□□□ 1.34
TMED1-205ENST00000589638 SALL2Q9Y467 1007 aaPredicted RBP23.41■■□□□ 1.34
TMED1-205ENST00000589638 CAMTA1Q9Y6Y1 1673 aa23.41■■□□□ 1.34
TMED1-205ENST00000589638 SPATA31A6Q5VVP1 1343 aa23.4■■□□□ 1.34
TMED1-205ENST00000589638 RGPD1P0DJD0 1748 aa23.4■■□□□ 1.34
TMED1-205ENST00000589638 PNNQ9H307 717 aaKnown RBP23.4■■□□□ 1.34
TMED1-205ENST00000589638 STRN4Q9NRL3 753 aa23.4■■□□□ 1.34
TMED1-205ENST00000589638 NLRP2Q9NX02 1062 aa23.4■■□□□ 1.34
TMED1-205ENST00000589638 BTG4Q9NY30 223 aa23.4■■□□□ 1.34
TMED1-205ENST00000589638 LMO7Q8WWI1 1683 aa23.4■■□□□ 1.34
TMED1-205ENST00000589638 MAPK8IP3Q9UPT6 1336 aa23.39■■□□□ 1.34
TMED1-205ENST00000589638 APAF1O14727 1248 aa23.39■■□□□ 1.33
TMED1-205ENST00000589638 EVA1CP58658 441 aa23.39■■□□□ 1.33
TMED1-205ENST00000589638 PLEKHF1Q96S99 279 aa23.39■■□□□ 1.33
TMED1-205ENST00000589638 COL5A2P05997 1499 aaPredicted RBP23.38■■□□□ 1.33
TMED1-205ENST00000589638 RGPD5Q99666 1765 aa23.38■■□□□ 1.33
TMED1-205ENST00000589638 NEFMP07197 916 aa23.37■■□□□ 1.33
TMED1-205ENST00000589638 COL14A1Q05707 1796 aaKnown RBP23.37■■□□□ 1.33
TMED1-205ENST00000589638 RRP7AQ9Y3A4 280 aaKnown RBP23.36■■□□□ 1.33
TMED1-205ENST00000589638 LRP6O75581 1613 aa23.36■■□□□ 1.33
TMED1-205ENST00000589638 WDR17Q8IZU2 1322 aa23.35■■□□□ 1.33
TMED1-205ENST00000589638 TOM1L2Q6ZVM7 507 aa23.35■■□□□ 1.33
TMED1-205ENST00000589638 TCP11L2Q8N4U5 519 aa23.35■■□□□ 1.33
TMED1-205ENST00000589638 FBXO41Q8TF61 875 aa23.35■■□□□ 1.33
TMED1-205ENST00000589638 KDRP35968 1356 aa23.35■■□□□ 1.33
TMED1-205ENST00000589638 NEUROD2Q15784 382 aa23.34■■□□□ 1.33
TMED1-205ENST00000589638 MEX3CQ5U5Q3 659 aaKnown RBP23.34■■□□□ 1.33
TMED1-205ENST00000589638 LARP1Q6PKG0 1096 aaKnown RBP23.34■■□□□ 1.33
TMED1-205ENST00000589638 PHACTR3Q96KR7 559 aa23.34■■□□□ 1.33
TMED1-205ENST00000589638 C8orf37Q96NL8 207 aa23.34■■□□□ 1.33
TMED1-205ENST00000589638 NGLY1Q96IV0 654 aa23.31■■□□□ 1.32
TMED1-205ENST00000589638 RGPD2P0DJD1 1756 aa23.31■■□□□ 1.32
TMED1-205ENST00000589638 ZBED9Q6R2W3 1325 aa23.31■■□□□ 1.32
TMED1-205ENST00000589638 NCAPD2Q15021 1401 aa23.3■■□□□ 1.32
TMED1-205ENST00000589638 TMPOP42166 694 aaKnown RBP23.29■■□□□ 1.32
TMED1-205ENST00000589638 PLCH1Q4KWH8 1693 aa23.28■■□□□ 1.32
TMED1-205ENST00000589638 NFE2L2Q16236 605 aa23.28■■□□□ 1.32
TMED1-205ENST00000589638 CARD10Q9BWT7 1032 aa23.27■■□□□ 1.32
TMED1-205ENST00000589638 USP35Q9P2H5 1018 aa23.27■■□□□ 1.32
TMED1-205ENST00000589638 FAM208AQ9UK61 1670 aaKnown RBP23.27■■□□□ 1.32
TMED1-205ENST00000589638 SLIT2O94813 1529 aa23.27■■□□□ 1.32
TMED1-205ENST00000589638 CRB1P82279 1406 aa23.26■■□□□ 1.31
TMED1-205ENST00000589638 RIPK4P57078 832 aa23.26■■□□□ 1.31
TMED1-205ENST00000589638 RAPGEF4Q8WZA2 1011 aa23.26■■□□□ 1.31
TMED1-205ENST00000589638 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
TMED1-205ENST00000589638 TATP17735 454 aaPredicted RBP23.24■■□□□ 1.31
TMED1-205ENST00000589638 UNC5CLQ8IV45 518 aa23.23■■□□□ 1.31
TMED1-205ENST00000589638 GAS2L2Q8NHY3 880 aa23.23■■□□□ 1.31
TMED1-205ENST00000589638 NRAPQ86VF7 1730 aa23.22■■□□□ 1.31
TMED1-205ENST00000589638 PLEKHO1Q53GL0 409 aaPredicted RBP23.22■■□□□ 1.31
TMED1-205ENST00000589638 FNBP4Q8N3X1 1017 aaPredicted RBP23.22■■□□□ 1.31
TMED1-205ENST00000589638 NGEFQ8N5V2 710 aa23.22■■□□□ 1.31
TMED1-205ENST00000589638 CCDC9Q9Y3X0 531 aaKnown RBP23.22■■□□□ 1.31
TMED1-205ENST00000589638 MEGF6O75095 1541 aa23.22■■□□□ 1.31
TMED1-205ENST00000589638 USP21Q9UK80 565 aa23.21■■□□□ 1.31
TMED1-205ENST00000589638 NWD2Q9ULI1 1742 aa23.2■■□□□ 1.3
TMED1-205ENST00000589638 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
TMED1-205ENST00000589638 TRIM35Q9UPQ4 493 aa23.2■■□□□ 1.3
TMED1-205ENST00000589638 BCL9LQ86UU0 1499 aa23.19■■□□□ 1.3
TMED1-205ENST00000589638 AFF2P51816 1311 aa23.19■■□□□ 1.3
TMED1-205ENST00000589638 IL2RBP14784 551 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms