RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MARCH10Q8NA82 808 aaPredicted RBP9.28□□□□□ -0.92
VPS25-204ENST00000589577 NLGN2Q8NFZ4 835 aa9.28□□□□□ -0.92
VPS25-204ENST00000589577 HIRIP3Q9BW71 556 aaPredicted RBP9.28□□□□□ -0.92
VPS25-204ENST00000589577 C14orf93Q9H972 538 aaKnown RBP9.28□□□□□ -0.92
VPS25-204ENST00000589577 BTAF1O14981 1849 aa9.28□□□□□ -0.92
VPS25-204ENST00000589577 PELP1Q8IZL8 1130 aaKnown RBP9.27□□□□□ -0.93
VPS25-204ENST00000589577 USP19O94966 1318 aa9.27□□□□□ -0.93
VPS25-204ENST00000589577 EIF3AQ14152 1382 aaKnown RBP9.26□□□□□ -0.93
VPS25-204ENST00000589577 ARHGEF28Q8N1W1 1705 aaKnown RBP9.26□□□□□ -0.93
VPS25-204ENST00000589577 ZNF827Q17R98 1081 aa9.26□□□□□ -0.93
VPS25-204ENST00000589577 CFAP70Q5T0N1 1121 aa9.26□□□□□ -0.93
VPS25-204ENST00000589577 COL13A1Q5TAT6 717 aaPredicted RBP9.26□□□□□ -0.93
VPS25-204ENST00000589577 NGDNQ8NEJ9 315 aaKnown RBP9.26□□□□□ -0.93
VPS25-204ENST00000589577 RGPD5Q99666 1765 aa9.26□□□□□ -0.93
VPS25-204ENST00000589577 WDR90Q96KV7 1748 aa9.25□□□□□ -0.93
VPS25-204ENST00000589577 CAPN15O75808 1086 aa9.25□□□□□ -0.93
VPS25-204ENST00000589577 DDB1Q16531 1140 aa9.25□□□□□ -0.93
VPS25-204ENST00000589577 DNAJC5GQ8N7S2 189 aa9.25□□□□□ -0.93
VPS25-204ENST00000589577 MINK1Q8N4C8 1332 aaPredicted RBP9.25□□□□□ -0.93
VPS25-204ENST00000589577 SLC4A1APQ9BWU0 796 aaKnown RBP9.24□□□□□ -0.93
VPS25-204ENST00000589577 GPBP1L1Q9HC44 474 aaPredicted RBP9.24□□□□□ -0.93
VPS25-204ENST00000589577 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
VPS25-204ENST00000589577 WASLO00401 505 aaPredicted RBP9.23□□□□□ -0.93
VPS25-204ENST00000589577 SLC34A2O95436 690 aa9.23□□□□□ -0.93
VPS25-204ENST00000589577 KLHL34Q8N239 644 aa9.23□□□□□ -0.93
VPS25-204ENST00000589577 POGKQ9P215 609 aa9.23□□□□□ -0.93
VPS25-204ENST00000589577 SLIT3O75094 1523 aa9.22□□□□□ -0.93
VPS25-204ENST00000589577 ZNF526Q8TF50 670 aaPredicted RBP9.22□□□□□ -0.93
VPS25-204ENST00000589577 TRPM1Q7Z4N2 1603 aa9.22□□□□□ -0.93
VPS25-204ENST00000589577 KIF3CO14782 793 aa9.21□□□□□ -0.94
VPS25-204ENST00000589577 PRELPP51888 382 aa9.21□□□□□ -0.94
VPS25-204ENST00000589577 LRRC4BQ9NT99 713 aa9.21□□□□□ -0.94
VPS25-204ENST00000589577 ABCC6O95255 1503 aa9.21□□□□□ -0.94
VPS25-204ENST00000589577 GRIN3BO60391 1043 aa9.2□□□□□ -0.94
VPS25-204ENST00000589577 GCP02774 474 aa9.2□□□□□ -0.94
VPS25-204ENST00000589577 AKT1S1Q96B36 256 aa9.2□□□□□ -0.94
VPS25-204ENST00000589577 PNPLA7Q6ZV29 1317 aa9.2□□□□□ -0.94
VPS25-204ENST00000589577 TNS2Q63HR2 1409 aa9.2□□□□□ -0.94
VPS25-204ENST00000589577 APLP1P51693 650 aa9.19□□□□□ -0.94
VPS25-204ENST00000589577 NUDT16Q96DE0 195 aaKnown RBP9.19□□□□□ -0.94
VPS25-204ENST00000589577 TRAK1Q9UPV9 953 aa9.19□□□□□ -0.94
VPS25-204ENST00000589577 ACEP12821 1306 aa9.19□□□□□ -0.94
VPS25-204ENST00000589577 PIK3C2AO00443 1686 aa9.19□□□□□ -0.94
VPS25-204ENST00000589577 LY75O60449 1722 aa9.18□□□□□ -0.94
VPS25-204ENST00000589577 POLD1P28340 1107 aa9.18□□□□□ -0.94
VPS25-204ENST00000589577 WDR17Q8IZU2 1322 aa9.18□□□□□ -0.94
VPS25-204ENST00000589577 ABTB2Q8N961 1025 aa9.18□□□□□ -0.94
VPS25-204ENST00000589577 SLC16A10Q8TF71 515 aa9.18□□□□□ -0.94
VPS25-204ENST00000589577 AXIN2Q9Y2T1 843 aa9.18□□□□□ -0.94
VPS25-204ENST00000589577 BRD4O60885 1362 aaPredicted RBP9.17□□□□□ -0.94
VPS25-204ENST00000589577 TOM1L2Q6ZVM7 507 aa9.17□□□□□ -0.94
VPS25-204ENST00000589577 TNS4Q8IZW8 715 aa9.17□□□□□ -0.94
VPS25-204ENST00000589577 KAT6BQ8WYB5 2073 aa9.17□□□□□ -0.94
VPS25-204ENST00000589577 CICQ96RK0 1608 aaPredicted RBP9.16□□□□□ -0.94
VPS25-204ENST00000589577 USP6P35125 1406 aa9.16□□□□□ -0.94
VPS25-204ENST00000589577 JMYQ8N9B5 988 aa9.16□□□□□ -0.94
VPS25-204ENST00000589577 ACSBG1Q96GR2 724 aa9.16□□□□□ -0.94
VPS25-204ENST00000589577 CDCA7Q9BWT1 371 aaPredicted RBP9.16□□□□□ -0.94
VPS25-204ENST00000589577 QRICH2Q9H0J4 1663 aa9.16□□□□□ -0.94
VPS25-204ENST00000589577 CPSF1Q10570 1443 aaKnown RBP9.15□□□□□ -0.94
VPS25-204ENST00000589577 PLEKHG3A1L390 1219 aa9.14□□□□□ -0.95
VPS25-204ENST00000589577 ZBTB7CA1YPR0 619 aa9.14□□□□□ -0.95
VPS25-204ENST00000589577 HTRA3P83110 453 aa9.14□□□□□ -0.95
VPS25-204ENST00000589577 NLRP13Q86W25 1043 aa9.14□□□□□ -0.95
VPS25-204ENST00000589577 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
VPS25-204ENST00000589577 EXOC5O00471 708 aa9.13□□□□□ -0.95
VPS25-204ENST00000589577 KLRG1Q96E93 195 aa9.13□□□□□ -0.95
VPS25-204ENST00000589577 CARD10Q9BWT7 1032 aa9.13□□□□□ -0.95
VPS25-204ENST00000589577 DOT1LQ8TEK3 1739 aa9.13□□□□□ -0.95
VPS25-204ENST00000589577 USP54Q70EL1 1684 aa9.13□□□□□ -0.95
VPS25-204ENST00000589577 NFAT5O94916 1531 aa9.12□□□□□ -0.95
VPS25-204ENST00000589577 KCNQ4P56696 695 aa9.12□□□□□ -0.95
VPS25-204ENST00000589577 CDK19Q9BWU1 502 aa9.12□□□□□ -0.95
VPS25-204ENST00000589577 CCDC61Q9Y6R9 512 aa9.12□□□□□ -0.95
VPS25-204ENST00000589577 KIAA1551Q9HCM1 1747 aa9.11□□□□□ -0.95
VPS25-204ENST00000589577 C5P01031 1676 aa9.11□□□□□ -0.95
VPS25-204ENST00000589577 TOMM70O94826 608 aa9.11□□□□□ -0.95
VPS25-204ENST00000589577 TOGARAM1Q9Y4F4 1720 aa9.11□□□□□ -0.95
VPS25-204ENST00000589577 CCDC7Q96M83 1385 aa9.11□□□□□ -0.95
VPS25-204ENST00000589577 TAF1LQ8IZX4 1826 aa9.1□□□□□ -0.95
VPS25-204ENST00000589577 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
VPS25-204ENST00000589577 MSL1Q68DK7 614 aa9.1□□□□□ -0.95
VPS25-204ENST00000589577 PPARGC1BQ86YN6 1023 aaKnown RBP9.1□□□□□ -0.95
VPS25-204ENST00000589577 MPHOSPH9Q99550 1183 aa9.1□□□□□ -0.95
VPS25-204ENST00000589577 TFCP2L1Q9NZI6 479 aa9.1□□□□□ -0.95
VPS25-204ENST00000589577 ARHGEF25Q86VW2 580 aa9.09□□□□□ -0.95
VPS25-204ENST00000589577 COL23A1Q86Y22 540 aaPredicted RBP9.09□□□□□ -0.95
VPS25-204ENST00000589577 WWC3Q9ULE0 1092 aa9.09□□□□□ -0.95
VPS25-204ENST00000589577 CD2APQ9Y5K6 639 aa9.09□□□□□ -0.95
VPS25-204ENST00000589577 NSD2O96028 1365 aa9.09□□□□□ -0.95
VPS25-204ENST00000589577 LTN1O94822 1766 aa9.09□□□□□ -0.95
VPS25-204ENST00000589577 NLRP6P59044 892 aa9.08□□□□□ -0.96
VPS25-204ENST00000589577 NMRK2Q9NPI5 230 aa9.08□□□□□ -0.96
VPS25-204ENST00000589577 PKD1L3Q7Z443 1732 aa9.08□□□□□ -0.96
VPS25-204ENST00000589577 KIF13BQ9NQT8 1826 aa9.08□□□□□ -0.96
VPS25-204ENST00000589577 IGSF1Q8N6C5 1336 aa9.07□□□□□ -0.96
VPS25-204ENST00000589577 CSB-PGBD3P0DP91 1061 aa9.07□□□□□ -0.96
VPS25-204ENST00000589577 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
VPS25-204ENST00000589577 BRCA1P38398 1863 aaKnown RBP9.06□□□□□ -0.96
VPS25-204ENST00000589577 UBR3Q6ZT12 1888 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms