RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 FLT4P35916 1363 aa16.4■□□□□ 0.22
DNMT1-218ENST00000589294 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
DNMT1-218ENST00000589294 ABCC6O95255 1503 aa16.4■□□□□ 0.22
DNMT1-218ENST00000589294 INSRP06213 1382 aa16.39■□□□□ 0.21
DNMT1-218ENST00000589294 HSP90AB2PQ58FF8 381 aa16.39■□□□□ 0.21
DNMT1-218ENST00000589294 CFAP53Q96M91 514 aa16.39■□□□□ 0.21
DNMT1-218ENST00000589294 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
DNMT1-218ENST00000589294 MAP2P11137 1827 aaKnown RBP16.39■□□□□ 0.21
DNMT1-218ENST00000589294 BLMP54132 1417 aaPredicted RBP16.38■□□□□ 0.21
DNMT1-218ENST00000589294 EVA1CP58658 441 aa16.38■□□□□ 0.21
DNMT1-218ENST00000589294 COL14A1Q05707 1796 aaKnown RBP16.37■□□□□ 0.21
DNMT1-218ENST00000589294 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
DNMT1-218ENST00000589294 SLIT2O94813 1529 aa16.36■□□□□ 0.21
DNMT1-218ENST00000589294 ANKRD24Q8TF21 1146 aa16.36■□□□□ 0.21
DNMT1-218ENST00000589294 COL18A1P39060 1754 aa16.36■□□□□ 0.21
DNMT1-218ENST00000589294 CDK12Q9NYV4 1490 aaPredicted RBP16.35■□□□□ 0.21
DNMT1-218ENST00000589294 CAMTA1Q9Y6Y1 1673 aa16.35■□□□□ 0.21
DNMT1-218ENST00000589294 USP21Q9UK80 565 aa16.35■□□□□ 0.21
DNMT1-218ENST00000589294 LTN1O94822 1766 aa16.35■□□□□ 0.21
DNMT1-218ENST00000589294 DIAPH1O60610 1272 aaKnown RBP16.34■□□□□ 0.21
DNMT1-218ENST00000589294 ERBB3P21860 1342 aa16.34■□□□□ 0.21
DNMT1-218ENST00000589294 AFF2P51816 1311 aa16.34■□□□□ 0.21
DNMT1-218ENST00000589294 LMO7Q8WWI1 1683 aa16.34■□□□□ 0.21
DNMT1-218ENST00000589294 IL13P35225 146 aa16.33■□□□□ 0.2
DNMT1-218ENST00000589294 EIF4A2Q14240 407 aaKnown RBP16.33■□□□□ 0.2
DNMT1-218ENST00000589294 ZNF772Q68DY9 489 aaPredicted RBP16.33■□□□□ 0.2
DNMT1-218ENST00000589294 WDR17Q8IZU2 1322 aa16.33■□□□□ 0.2
DNMT1-218ENST00000589294 BCL9LQ86UU0 1499 aa16.33■□□□□ 0.2
DNMT1-218ENST00000589294 COL5A2P05997 1499 aaPredicted RBP16.32■□□□□ 0.2
DNMT1-218ENST00000589294 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
DNMT1-218ENST00000589294 VPS72Q15906 364 aa16.32■□□□□ 0.2
DNMT1-218ENST00000589294 LTV1Q96GA3 475 aaPredicted RBP16.32■□□□□ 0.2
DNMT1-218ENST00000589294 PEAK1Q9H792 1746 aa16.32■□□□□ 0.2
DNMT1-218ENST00000589294 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
DNMT1-218ENST00000589294 NUDCQ9Y266 331 aa16.32■□□□□ 0.2
DNMT1-218ENST00000589294 CCER2I3L3R5 266 aa16.31■□□□□ 0.2
DNMT1-218ENST00000589294 LARP1Q6PKG0 1096 aaKnown RBP16.31■□□□□ 0.2
DNMT1-218ENST00000589294 MIER1Q8N108 512 aa16.31■□□□□ 0.2
DNMT1-218ENST00000589294 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
DNMT1-218ENST00000589294 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
DNMT1-218ENST00000589294 TOM1L2Q6ZVM7 507 aa16.3■□□□□ 0.2
DNMT1-218ENST00000589294 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
DNMT1-218ENST00000589294 TRPC5Q9UL62 973 aaPredicted RBP16.3■□□□□ 0.2
DNMT1-218ENST00000589294 QTRT2Q9H974 415 aaKnown RBP16.29■□□□□ 0.2
DNMT1-218ENST00000589294 SPATA31A5Q5VU36 1347 aa16.28■□□□□ 0.2
DNMT1-218ENST00000589294 SPATA31A7Q8IWB4 1347 aa16.28■□□□□ 0.2
DNMT1-218ENST00000589294 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
DNMT1-218ENST00000589294 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
DNMT1-218ENST00000589294 EYA1Q99502 592 aa16.28■□□□□ 0.2
DNMT1-218ENST00000589294 THRAP3Q9Y2W1 955 aaKnown RBP16.28■□□□□ 0.2
DNMT1-218ENST00000589294 COL3A1P02461 1466 aaPredicted RBP16.28■□□□□ 0.2
DNMT1-218ENST00000589294 CRB1P82279 1406 aa16.28■□□□□ 0.2
DNMT1-218ENST00000589294 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.2
DNMT1-218ENST00000589294 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.2
DNMT1-218ENST00000589294 MRS2Q9HD23 443 aa16.27■□□□□ 0.2
DNMT1-218ENST00000589294 RGPD5Q99666 1765 aa16.27■□□□□ 0.2
DNMT1-218ENST00000589294 SPATA31A1Q5TZJ5 1347 aa16.26■□□□□ 0.19
DNMT1-218ENST00000589294 GJD4Q96KN9 370 aaPredicted RBP16.26■□□□□ 0.19
DNMT1-218ENST00000589294 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
DNMT1-218ENST00000589294 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
DNMT1-218ENST00000589294 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
DNMT1-218ENST00000589294 CCDC184Q52MB2 194 aa16.25■□□□□ 0.19
DNMT1-218ENST00000589294 TCP11L2Q8N4U5 519 aa16.25■□□□□ 0.19
DNMT1-218ENST00000589294 RGS17Q9UGC6 210 aaPredicted RBP16.25■□□□□ 0.19
DNMT1-218ENST00000589294 ATRNO75882 1429 aa16.25■□□□□ 0.19
DNMT1-218ENST00000589294 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
DNMT1-218ENST00000589294 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
DNMT1-218ENST00000589294 BARGINQ6ZT62 677 aa16.24■□□□□ 0.19
DNMT1-218ENST00000589294 PNISRQ8TF01 805 aaKnown RBP16.24■□□□□ 0.19
DNMT1-218ENST00000589294 NRAPQ86VF7 1730 aa16.24■□□□□ 0.19
DNMT1-218ENST00000589294 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.24■□□□□ 0.19
DNMT1-218ENST00000589294 ONECUT3O60422 494 aaPredicted RBP16.23■□□□□ 0.19
DNMT1-218ENST00000589294 FCHSD2O94868 740 aa16.23■□□□□ 0.19
DNMT1-218ENST00000589294 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
DNMT1-218ENST00000589294 SULT6B1Q6IMI4 303 aa16.23■□□□□ 0.19
DNMT1-218ENST00000589294 CDCA7Q9BWT1 371 aaPredicted RBP16.23■□□□□ 0.19
DNMT1-218ENST00000589294 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
DNMT1-218ENST00000589294 USP35Q9P2H5 1018 aa16.23■□□□□ 0.19
DNMT1-218ENST00000589294 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
DNMT1-218ENST00000589294 RBM6P78332 1123 aaKnown RBP16.22■□□□□ 0.19
DNMT1-218ENST00000589294 KDRP35968 1356 aa16.22■□□□□ 0.19
DNMT1-218ENST00000589294 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
DNMT1-218ENST00000589294 RAPGEF4Q8WZA2 1011 aa16.21■□□□□ 0.19
DNMT1-218ENST00000589294 IL2RBP14784 551 aa16.2■□□□□ 0.18
DNMT1-218ENST00000589294 RXRBP28702 533 aa16.2■□□□□ 0.18
DNMT1-218ENST00000589294 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
DNMT1-218ENST00000589294 ADAMTS8Q9UP79 889 aa16.2■□□□□ 0.18
DNMT1-218ENST00000589294 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
DNMT1-218ENST00000589294 HMOX1P09601 288 aa16.19■□□□□ 0.18
DNMT1-218ENST00000589294 TATP17735 454 aaPredicted RBP16.19■□□□□ 0.18
DNMT1-218ENST00000589294 POTEAQ6S8J7 498 aa16.19■□□□□ 0.18
DNMT1-218ENST00000589294 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
DNMT1-218ENST00000589294 FAM98CQ17RN3 349 aaKnown RBP16.18■□□□□ 0.18
DNMT1-218ENST00000589294 RSPH6AQ9H0K4 717 aa16.18■□□□□ 0.18
DNMT1-218ENST00000589294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.18■□□□□ 0.18
DNMT1-218ENST00000589294 RGPD1P0DJD0 1748 aa16.18■□□□□ 0.18
DNMT1-218ENST00000589294 EXOC5O00471 708 aa16.16■□□□□ 0.18
DNMT1-218ENST00000589294 AMOTQ4VCS5 1084 aa16.16■□□□□ 0.18
DNMT1-218ENST00000589294 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
DNMT1-218ENST00000589294 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms