RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 RTL1A6NKG5 1358 aa33.01■■■□□ 2.87
RFX1-205ENST00000589239 U2SURPO15042 1029 aaKnown RBP33.01■■■□□ 2.87
RFX1-205ENST00000589239 IL13P35225 146 aa33.01■■■□□ 2.87
RFX1-205ENST00000589239 NUDCQ9Y266 331 aa33.01■■■□□ 2.87
RFX1-205ENST00000589239 IP6K1Q92551 441 aa33■■■□□ 2.87
RFX1-205ENST00000589239 EIF4A2Q14240 407 aaKnown RBP32.99■■■□□ 2.87
RFX1-205ENST00000589239 KIAA0232Q92628 1395 aa32.99■■■□□ 2.87
RFX1-205ENST00000589239 ABCA3Q99758 1704 aa32.99■■■□□ 2.87
RFX1-205ENST00000589239 U2AF1L5P0DN76 240 aaPredicted RBP32.98■■■□□ 2.87
RFX1-205ENST00000589239 U2AF1Q01081 240 aaKnown RBP eCLIP32.98■■■□□ 2.87
RFX1-205ENST00000589239 CPDO75976 1380 aa32.96■■■□□ 2.87
RFX1-205ENST00000589239 COL22A1Q8NFW1 1626 aaPredicted RBP32.96■■■□□ 2.87
RFX1-205ENST00000589239 CHRNA2Q15822 529 aa32.95■■■□□ 2.86
RFX1-205ENST00000589239 AXIN2Q9Y2T1 843 aa32.95■■■□□ 2.86
RFX1-205ENST00000589239 LTV1Q96GA3 475 aaPredicted RBP32.93■■■□□ 2.86
RFX1-205ENST00000589239 HSPA1LP34931 641 aa32.92■■■□□ 2.86
RFX1-205ENST00000589239 SENP3-EIF4A1A0A087X0R7 540 aa32.91■■■□□ 2.86
RFX1-205ENST00000589239 PRDM11Q9NQV5 511 aa32.91■■■□□ 2.86
RFX1-205ENST00000589239 HNRNPUQ00839 825 aaKnown RBP eCLIP32.9■■■□□ 2.86
RFX1-205ENST00000589239 CCDC146Q8IYE0 955 aa32.9■■■□□ 2.86
RFX1-205ENST00000589239 BLMP54132 1417 aaPredicted RBP32.9■■■□□ 2.86
RFX1-205ENST00000589239 JCADQ9P266 1359 aa32.87■■■□□ 2.85
RFX1-205ENST00000589239 HMOX1P09601 288 aa32.87■■■□□ 2.85
RFX1-205ENST00000589239 COL18A1P39060 1754 aa32.87■■■□□ 2.85
RFX1-205ENST00000589239 ANKRD24Q8TF21 1146 aa32.84■■■□□ 2.85
RFX1-205ENST00000589239 EYA1Q99502 592 aa32.84■■■□□ 2.85
RFX1-205ENST00000589239 RGPD5Q99666 1765 aa32.83■■■□□ 2.85
RFX1-205ENST00000589239 FAM83GA6ND36 823 aa32.83■■■□□ 2.85
RFX1-205ENST00000589239 NUTM2BA6NNL0 878 aaPredicted RBP32.83■■■□□ 2.85
RFX1-205ENST00000589239 NUTM2EB1AL46 878 aaPredicted RBP32.83■■■□□ 2.85
RFX1-205ENST00000589239 NUTM2AQ8IVF1 878 aaPredicted RBP32.83■■■□□ 2.85
RFX1-205ENST00000589239 RGPD1P0DJD0 1748 aa32.82■■■□□ 2.84
RFX1-205ENST00000589239 AEBP1Q8IUX7 1158 aa32.82■■■□□ 2.84
RFX1-205ENST00000589239 ABCC6O95255 1503 aa32.82■■■□□ 2.84
RFX1-205ENST00000589239 ERBB3P21860 1342 aa32.82■■■□□ 2.84
RFX1-205ENST00000589239 SULT6B1Q6IMI4 303 aa32.81■■■□□ 2.84
RFX1-205ENST00000589239 RSPH6AQ9H0K4 717 aa32.81■■■□□ 2.84
RFX1-205ENST00000589239 FCHSD2O94868 740 aa32.81■■■□□ 2.84
RFX1-205ENST00000589239 ADAMTS2O95450 1211 aa32.8■■■□□ 2.84
RFX1-205ENST00000589239 IGSF1Q8N6C5 1336 aa32.8■■■□□ 2.84
RFX1-205ENST00000589239 RUNDC1Q96C34 613 aa32.79■■■□□ 2.84
RFX1-205ENST00000589239 PLEKHF1Q96S99 279 aa32.79■■■□□ 2.84
RFX1-205ENST00000589239 NBPF6Q5VWK0 638 aa32.78■■■□□ 2.84
RFX1-205ENST00000589239 NBPF4Q96M43 638 aa32.78■■■□□ 2.84
RFX1-205ENST00000589239 CAMTA1Q9Y6Y1 1673 aa32.78■■■□□ 2.84
RFX1-205ENST00000589239 LMO7Q8WWI1 1683 aa32.78■■■□□ 2.84
RFX1-205ENST00000589239 PRKAR2BP31323 418 aa32.78■■■□□ 2.84
RFX1-205ENST00000589239 USHBP1Q8N6Y0 703 aa32.77■■■□□ 2.84
RFX1-205ENST00000589239 APAF1O14727 1248 aa32.76■■■□□ 2.83
RFX1-205ENST00000589239 SALL2Q9Y467 1007 aaPredicted RBP32.75■■■□□ 2.83
RFX1-205ENST00000589239 PNNQ9H307 717 aaKnown RBP32.74■■■□□ 2.83
RFX1-205ENST00000589239 KDRP35968 1356 aa32.73■■■□□ 2.83
RFX1-205ENST00000589239 CSB-PGBD3P0DP91 1061 aa32.73■■■□□ 2.83
RFX1-205ENST00000589239 RGPD2P0DJD1 1756 aa32.72■■■□□ 2.83
RFX1-205ENST00000589239 COL5A2P05997 1499 aaPredicted RBP32.72■■■□□ 2.83
RFX1-205ENST00000589239 BTG4Q9NY30 223 aa32.72■■■□□ 2.83
RFX1-205ENST00000589239 MAPK8IP3Q9UPT6 1336 aa32.71■■■□□ 2.83
RFX1-205ENST00000589239 TCP11L2Q8N4U5 519 aa32.71■■■□□ 2.83
RFX1-205ENST00000589239 SPATA31A6Q5VVP1 1343 aa32.71■■■□□ 2.83
RFX1-205ENST00000589239 PHACTR3Q96KR7 559 aa32.71■■■□□ 2.83
RFX1-205ENST00000589239 COL14A1Q05707 1796 aaKnown RBP32.7■■■□□ 2.83
RFX1-205ENST00000589239 NLRP2Q9NX02 1062 aa32.69■■■□□ 2.82
RFX1-205ENST00000589239 STRN4Q9NRL3 753 aa32.69■■■□□ 2.82
RFX1-205ENST00000589239 RRP7AQ9Y3A4 280 aaKnown RBP32.68■■■□□ 2.82
RFX1-205ENST00000589239 ZBED9Q6R2W3 1325 aa32.68■■■□□ 2.82
RFX1-205ENST00000589239 WDR17Q8IZU2 1322 aa32.67■■■□□ 2.82
RFX1-205ENST00000589239 NEFMP07197 916 aa32.66■■■□□ 2.82
RFX1-205ENST00000589239 EVA1CP58658 441 aa32.66■■■□□ 2.82
RFX1-205ENST00000589239 NEUROD2Q15784 382 aa32.66■■■□□ 2.82
RFX1-205ENST00000589239 LRP6O75581 1613 aa32.65■■■□□ 2.82
RFX1-205ENST00000589239 NCAPD2Q15021 1401 aa32.64■■■□□ 2.82
RFX1-205ENST00000589239 LARP1Q6PKG0 1096 aaKnown RBP32.63■■■□□ 2.81
RFX1-205ENST00000589239 TOM1L2Q6ZVM7 507 aa32.63■■■□□ 2.81
RFX1-205ENST00000589239 TMPOP42166 694 aaKnown RBP32.62■■■□□ 2.81
RFX1-205ENST00000589239 FAM208AQ9UK61 1670 aaKnown RBP32.61■■■□□ 2.81
RFX1-205ENST00000589239 C8orf37Q96NL8 207 aa32.61■■■□□ 2.81
RFX1-205ENST00000589239 PLCH1Q4KWH8 1693 aa32.61■■■□□ 2.81
RFX1-205ENST00000589239 FBXO41Q8TF61 875 aa32.58■■■□□ 2.81
RFX1-205ENST00000589239 NFE2L2Q16236 605 aa32.57■■■□□ 2.8
RFX1-205ENST00000589239 NGLY1Q96IV0 654 aa32.56■■■□□ 2.8
RFX1-205ENST00000589239 SLIT2O94813 1529 aa32.56■■■□□ 2.8
RFX1-205ENST00000589239 RIPK4P57078 832 aa32.56■■■□□ 2.8
RFX1-205ENST00000589239 CARD10Q9BWT7 1032 aa32.55■■■□□ 2.8
RFX1-205ENST00000589239 MTHFSDQ2M296 383 aaKnown RBP32.54■■■□□ 2.8
RFX1-205ENST00000589239 CRB1P82279 1406 aa32.54■■■□□ 2.8
RFX1-205ENST00000589239 NGEFQ8N5V2 710 aa32.54■■■□□ 2.8
RFX1-205ENST00000589239 USP35Q9P2H5 1018 aa32.53■■■□□ 2.8
RFX1-205ENST00000589239 MEX3CQ5U5Q3 659 aaKnown RBP32.53■■■□□ 2.8
RFX1-205ENST00000589239 WWC1Q8IX03 1113 aa32.52■■■□□ 2.8
RFX1-205ENST00000589239 ZNF521Q96K83 1311 aa32.52■■■□□ 2.8
RFX1-205ENST00000589239 RAPGEF4Q8WZA2 1011 aa32.51■■■□□ 2.8
RFX1-205ENST00000589239 NRAPQ86VF7 1730 aa32.51■■■□□ 2.8
RFX1-205ENST00000589239 PHF23Q9BUL5 403 aaPredicted RBP32.51■■■□□ 2.79
RFX1-205ENST00000589239 TRIM35Q9UPQ4 493 aa32.51■■■□□ 2.79
RFX1-205ENST00000589239 MEGF6O75095 1541 aa32.5■■■□□ 2.79
RFX1-205ENST00000589239 NWD2Q9ULI1 1742 aa32.5■■■□□ 2.79
RFX1-205ENST00000589239 CCDC27Q2M243 656 aa32.5■■■□□ 2.79
RFX1-205ENST00000589239 NCBP3Q53F19 620 aaKnown RBP32.49■■■□□ 2.79
RFX1-205ENST00000589239 FNBP4Q8N3X1 1017 aaPredicted RBP32.48■■■□□ 2.79
RFX1-205ENST00000589239 GAS2L2Q8NHY3 880 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms