RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 NUTM2GQ5VZR2 741 aa12.65□□□□□ -0.38
RETREG3-207ENST00000589007 MARCH10Q8NA82 808 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-207ENST00000589007 BCL11BQ9C0K0 894 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-207ENST00000589007 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
RETREG3-207ENST00000589007 NFAT5O94916 1531 aa12.64□□□□□ -0.39
RETREG3-207ENST00000589007 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
RETREG3-207ENST00000589007 SLC15A2Q16348 729 aa12.64□□□□□ -0.39
RETREG3-207ENST00000589007 MTFR1LQ9H019 292 aa12.64□□□□□ -0.39
RETREG3-207ENST00000589007 ADCY9O60503 1353 aa12.64□□□□□ -0.39
RETREG3-207ENST00000589007 TNS2Q63HR2 1409 aa12.63□□□□□ -0.39
RETREG3-207ENST00000589007 KIAA1210Q9ULL0 1709 aa12.63□□□□□ -0.39
RETREG3-207ENST00000589007 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-207ENST00000589007 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-207ENST00000589007 TXNRD1Q16881 649 aa12.62□□□□□ -0.39
RETREG3-207ENST00000589007 PPARGC1BQ86YN6 1023 aaKnown RBP12.62□□□□□ -0.39
RETREG3-207ENST00000589007 NGDNQ8NEJ9 315 aaKnown RBP12.62□□□□□ -0.39
RETREG3-207ENST00000589007 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
RETREG3-207ENST00000589007 ZNF827Q17R98 1081 aa12.61□□□□□ -0.39
RETREG3-207ENST00000589007 NUDT16Q96DE0 195 aaKnown RBP12.61□□□□□ -0.39
RETREG3-207ENST00000589007 POGKQ9P215 609 aa12.61□□□□□ -0.39
RETREG3-207ENST00000589007 CPSF1Q10570 1443 aaKnown RBP12.61□□□□□ -0.39
RETREG3-207ENST00000589007 ACEP12821 1306 aa12.61□□□□□ -0.39
RETREG3-207ENST00000589007 C11orf95C9JLR9 678 aaPredicted RBP12.6□□□□□ -0.39
RETREG3-207ENST00000589007 MPHOSPH9Q99550 1183 aa12.6□□□□□ -0.39
RETREG3-207ENST00000589007 ARXQ96QS3 562 aa12.59□□□□□ -0.39
RETREG3-207ENST00000589007 ATP10DQ9P241 1426 aa12.59□□□□□ -0.39
RETREG3-207ENST00000589007 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
RETREG3-207ENST00000589007 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
RETREG3-207ENST00000589007 GCP02774 474 aa12.58□□□□□ -0.4
RETREG3-207ENST00000589007 TOGARAM1Q9Y4F4 1720 aa12.58□□□□□ -0.4
RETREG3-207ENST00000589007 LTN1O94822 1766 aa12.57□□□□□ -0.4
RETREG3-207ENST00000589007 DDB1Q16531 1140 aa12.57□□□□□ -0.4
RETREG3-207ENST00000589007 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
RETREG3-207ENST00000589007 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
RETREG3-207ENST00000589007 CICQ96RK0 1608 aaPredicted RBP12.57□□□□□ -0.4
RETREG3-207ENST00000589007 WDR17Q8IZU2 1322 aa12.57□□□□□ -0.4
RETREG3-207ENST00000589007 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
RETREG3-207ENST00000589007 USP6P35125 1406 aa12.56□□□□□ -0.4
RETREG3-207ENST00000589007 YBX3P16989 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
RETREG3-207ENST00000589007 EVA1CP58658 441 aa12.56□□□□□ -0.4
RETREG3-207ENST00000589007 LRRC4BQ9NT99 713 aa12.56□□□□□ -0.4
RETREG3-207ENST00000589007 STK32BQ9NY57 414 aa12.56□□□□□ -0.4
RETREG3-207ENST00000589007 MON2Q7Z3U7 1717 aa12.56□□□□□ -0.4
RETREG3-207ENST00000589007 PCNTO95613 3336 aa12.55□□□□□ -0.4
RETREG3-207ENST00000589007 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
RETREG3-207ENST00000589007 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
RETREG3-207ENST00000589007 TAF1LQ8IZX4 1826 aa12.54□□□□□ -0.4
RETREG3-207ENST00000589007 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
RETREG3-207ENST00000589007 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
RETREG3-207ENST00000589007 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
RETREG3-207ENST00000589007 PNPLA7Q6ZV29 1317 aa12.53□□□□□ -0.4
RETREG3-207ENST00000589007 C5P01031 1676 aa12.52□□□□□ -0.4
RETREG3-207ENST00000589007 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
RETREG3-207ENST00000589007 HSPA6P17066 643 aa12.51□□□□□ -0.41
RETREG3-207ENST00000589007 BRD4O60885 1362 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-207ENST00000589007 NSD2O96028 1365 aa12.51□□□□□ -0.41
RETREG3-207ENST00000589007 GPR162Q16538 588 aa12.5□□□□□ -0.41
RETREG3-207ENST00000589007 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
RETREG3-207ENST00000589007 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
RETREG3-207ENST00000589007 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
RETREG3-207ENST00000589007 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
RETREG3-207ENST00000589007 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
RETREG3-207ENST00000589007 CARD10Q9BWT7 1032 aa12.48□□□□□ -0.41
RETREG3-207ENST00000589007 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
RETREG3-207ENST00000589007 BRCA1P38398 1863 aaKnown RBP12.46□□□□□ -0.41
RETREG3-207ENST00000589007 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.41
RETREG3-207ENST00000589007 CCDC7Q96M83 1385 aa12.46□□□□□ -0.41
RETREG3-207ENST00000589007 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
RETREG3-207ENST00000589007 DNAJC5GQ8N7S2 189 aa12.45□□□□□ -0.42
RETREG3-207ENST00000589007 ACSBG1Q96GR2 724 aa12.45□□□□□ -0.42
RETREG3-207ENST00000589007 KAT6BQ8WYB5 2073 aa12.44□□□□□ -0.42
RETREG3-207ENST00000589007 KIF3CO14782 793 aa12.44□□□□□ -0.42
RETREG3-207ENST00000589007 SLC16A10Q8TF71 515 aa12.44□□□□□ -0.42
RETREG3-207ENST00000589007 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
RETREG3-207ENST00000589007 MAP2P11137 1827 aaKnown RBP12.42□□□□□ -0.42
RETREG3-207ENST00000589007 ERBB3P21860 1342 aa12.41□□□□□ -0.42
RETREG3-207ENST00000589007 CD163L1Q9NR16 1453 aa12.41□□□□□ -0.42
RETREG3-207ENST00000589007 ZBTB7CA1YPR0 619 aa12.4□□□□□ -0.42
RETREG3-207ENST00000589007 KCNQ4P56696 695 aa12.4□□□□□ -0.42
RETREG3-207ENST00000589007 NLRP6P59044 892 aa12.4□□□□□ -0.42
RETREG3-207ENST00000589007 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.42
RETREG3-207ENST00000589007 DCAF11Q8TEB1 546 aa12.4□□□□□ -0.42
RETREG3-207ENST00000589007 CABP2Q9NPB3 220 aa12.4□□□□□ -0.42
RETREG3-207ENST00000589007 C4BP0C0L5 1744 aa12.4□□□□□ -0.43
RETREG3-207ENST00000589007 N4BP2Q86UW6 1770 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-207ENST00000589007 EXOC5O00471 708 aa12.39□□□□□ -0.43
RETREG3-207ENST00000589007 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
RETREG3-207ENST00000589007 ITGB4P16144 1822 aa12.39□□□□□ -0.43
RETREG3-207ENST00000589007 GRIN3BO60391 1043 aa12.38□□□□□ -0.43
RETREG3-207ENST00000589007 GPBP1L1Q9HC44 474 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-207ENST00000589007 KDM2AQ9Y2K7 1162 aa12.38□□□□□ -0.43
RETREG3-207ENST00000589007 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
RETREG3-207ENST00000589007 NBPF1Q3BBV0 1214 aa12.37□□□□□ -0.43
RETREG3-207ENST00000589007 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
RETREG3-207ENST00000589007 COL13A1Q5TAT6 717 aaPredicted RBP12.37□□□□□ -0.43
RETREG3-207ENST00000589007 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
RETREG3-207ENST00000589007 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
RETREG3-207ENST00000589007 ANKRD36BQ8N2N9 1353 aa12.36□□□□□ -0.43
RETREG3-207ENST00000589007 POLD1P28340 1107 aa12.36□□□□□ -0.43
RETREG3-207ENST00000589007 AMIGO3Q86WK7 504 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms