RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 NPC1L1Q9UHC9 1359 aa11.15□□□□□ -0.63
APOC1-202ENST00000588750 LTN1O94822 1766 aa11.14□□□□□ -0.63
APOC1-202ENST00000588750 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
APOC1-202ENST00000588750 STRN4Q9NRL3 753 aa11.14□□□□□ -0.63
APOC1-202ENST00000588750 ZRANB1Q9UGI0 708 aa11.14□□□□□ -0.63
APOC1-202ENST00000588750 SMG6Q86US8 1419 aaKnown RBP11.14□□□□□ -0.63
APOC1-202ENST00000588750 LMO7Q8WWI1 1683 aa11.14□□□□□ -0.63
APOC1-202ENST00000588750 NRAPQ86VF7 1730 aa11.13□□□□□ -0.63
APOC1-202ENST00000588750 POTEAQ6S8J7 498 aa11.13□□□□□ -0.63
APOC1-202ENST00000588750 TOM1L2Q6ZVM7 507 aa11.13□□□□□ -0.63
APOC1-202ENST00000588750 IP6K1Q92551 441 aa11.13□□□□□ -0.63
APOC1-202ENST00000588750 COL5A2P05997 1499 aaPredicted RBP11.12□□□□□ -0.63
APOC1-202ENST00000588750 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
APOC1-202ENST00000588750 FLT4P35916 1363 aa11.12□□□□□ -0.63
APOC1-202ENST00000588750 MAP3K19Q56UN5 1328 aa11.11□□□□□ -0.63
APOC1-202ENST00000588750 SPATA31A5Q5VU36 1347 aa11.11□□□□□ -0.63
APOC1-202ENST00000588750 SPATA31A7Q8IWB4 1347 aa11.11□□□□□ -0.63
APOC1-202ENST00000588750 WDR17Q8IZU2 1322 aa11.11□□□□□ -0.63
APOC1-202ENST00000588750 CAMTA1Q9Y6Y1 1673 aa11.11□□□□□ -0.63
APOC1-202ENST00000588750 CRB1P82279 1406 aa11.11□□□□□ -0.63
APOC1-202ENST00000588750 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
APOC1-202ENST00000588750 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
APOC1-202ENST00000588750 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
APOC1-202ENST00000588750 FAM208AQ9UK61 1670 aaKnown RBP11.11□□□□□ -0.63
APOC1-202ENST00000588750 A0A0G2JS52 829 aa11.1□□□□□ -0.63
APOC1-202ENST00000588750 HOXC9P31274 260 aa11.1□□□□□ -0.63
APOC1-202ENST00000588750 MYT1Q01538 1121 aa11.1□□□□□ -0.63
APOC1-202ENST00000588750 TCP11L2Q8N4U5 519 aa11.1□□□□□ -0.63
APOC1-202ENST00000588750 COL18A1P39060 1754 aa11.1□□□□□ -0.63
APOC1-202ENST00000588750 ERBB3P21860 1342 aa11.09□□□□□ -0.63
APOC1-202ENST00000588750 SPATA31A1Q5TZJ5 1347 aa11.09□□□□□ -0.63
APOC1-202ENST00000588750 INSRP06213 1382 aa11.09□□□□□ -0.63
APOC1-202ENST00000588750 PPM1GO15355 546 aaPredicted RBP11.09□□□□□ -0.63
APOC1-202ENST00000588750 RRS1Q15050 365 aaKnown RBP11.09□□□□□ -0.63
APOC1-202ENST00000588750 CC2D1BQ5T0F9 858 aaKnown RBP11.09□□□□□ -0.63
APOC1-202ENST00000588750 BARGINQ6ZT62 677 aa11.09□□□□□ -0.63
APOC1-202ENST00000588750 ANKRD24Q8TF21 1146 aa11.09□□□□□ -0.63
APOC1-202ENST00000588750 CARD10Q9BWT7 1032 aa11.09□□□□□ -0.63
APOC1-202ENST00000588750 MAP2P11137 1827 aaKnown RBP11.08□□□□□ -0.64
APOC1-202ENST00000588750 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
APOC1-202ENST00000588750 TNNT2P45379 298 aaPredicted RBP11.08□□□□□ -0.64
APOC1-202ENST00000588750 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
APOC1-202ENST00000588750 NLRP2Q9NX02 1062 aa11.08□□□□□ -0.64
APOC1-202ENST00000588750 USP35Q9P2H5 1018 aa11.08□□□□□ -0.64
APOC1-202ENST00000588750 AXIN2Q9Y2T1 843 aa11.08□□□□□ -0.64
APOC1-202ENST00000588750 POLKQ9UBT6 870 aa11.07□□□□□ -0.64
APOC1-202ENST00000588750 GLI3P10071 1580 aa11.07□□□□□ -0.64
APOC1-202ENST00000588750 RGPD5Q99666 1765 aa11.06□□□□□ -0.64
APOC1-202ENST00000588750 DDX10Q13206 875 aaKnown RBP11.06□□□□□ -0.64
APOC1-202ENST00000588750 FAM98CQ17RN3 349 aaKnown RBP11.06□□□□□ -0.64
APOC1-202ENST00000588750 SEPT12Q8IYM1 358 aa11.06□□□□□ -0.64
APOC1-202ENST00000588750 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
APOC1-202ENST00000588750 RGS12O14924 1447 aa11.05□□□□□ -0.64
APOC1-202ENST00000588750 PDE3BQ13370 1112 aa11.05□□□□□ -0.64
APOC1-202ENST00000588750 RALBP1Q15311 655 aa11.05□□□□□ -0.64
APOC1-202ENST00000588750 LTV1Q96GA3 475 aaPredicted RBP11.05□□□□□ -0.64
APOC1-202ENST00000588750 EMILIN1Q9Y6C2 1016 aa11.05□□□□□ -0.64
APOC1-202ENST00000588750 HSP90AB2PQ58FF8 381 aa11.04□□□□□ -0.64
APOC1-202ENST00000588750 KRT27Q7Z3Y8 459 aa11.04□□□□□ -0.64
APOC1-202ENST00000588750 EXOC5O00471 708 aa11.03□□□□□ -0.64
APOC1-202ENST00000588750 IL2RBP14784 551 aa11.03□□□□□ -0.64
APOC1-202ENST00000588750 FBLN1P23142 703 aa11.03□□□□□ -0.64
APOC1-202ENST00000588750 MTHFSP49914 203 aa11.03□□□□□ -0.64
APOC1-202ENST00000588750 DDB1Q16531 1140 aa11.03□□□□□ -0.64
APOC1-202ENST00000588750 RAPGEF4Q8WZA2 1011 aa11.03□□□□□ -0.64
APOC1-202ENST00000588750 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
APOC1-202ENST00000588750 CNGB1Q14028 1251 aaPredicted RBP11.02□□□□□ -0.65
APOC1-202ENST00000588750 ILDR2Q71H61 639 aa11.02□□□□□ -0.65
APOC1-202ENST00000588750 NUDCQ9Y266 331 aa11.02□□□□□ -0.65
APOC1-202ENST00000588750 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
APOC1-202ENST00000588750 PEAK1Q9H792 1746 aa11.01□□□□□ -0.65
APOC1-202ENST00000588750 PARP4Q9UKK3 1724 aaKnown RBP11.01□□□□□ -0.65
APOC1-202ENST00000588750 TATP17735 454 aaPredicted RBP11.01□□□□□ -0.65
APOC1-202ENST00000588750 CCDC125Q86Z20 511 aa11.01□□□□□ -0.65
APOC1-202ENST00000588750 WNK3Q9BYP7 1800 aa11□□□□□ -0.65
APOC1-202ENST00000588750 SOCS7O14512 581 aa11□□□□□ -0.65
APOC1-202ENST00000588750 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
APOC1-202ENST00000588750 SF3B2Q13435 895 aaKnown RBP11□□□□□ -0.65
APOC1-202ENST00000588750 FAM196AQ6ZSG2 479 aa11□□□□□ -0.65
APOC1-202ENST00000588750 PARD3Q8TEW0 1356 aa11□□□□□ -0.65
APOC1-202ENST00000588750 EIF4A2Q14240 407 aaKnown RBP10.99□□□□□ -0.65
APOC1-202ENST00000588750 NBPF6Q5VWK0 638 aa10.99□□□□□ -0.65
APOC1-202ENST00000588750 NBPF4Q96M43 638 aa10.99□□□□□ -0.65
APOC1-202ENST00000588750 OVOS2A0A0G2JMS6 1433 aa10.99□□□□□ -0.65
APOC1-202ENST00000588750 PPP2R1AP30153 589 aa10.98□□□□□ -0.65
APOC1-202ENST00000588750 SPG7Q9UQ90 795 aa10.98□□□□□ -0.65
APOC1-202ENST00000588750 DISP2A7MBM2 1401 aa10.98□□□□□ -0.65
APOC1-202ENST00000588750 TNS2Q63HR2 1409 aa10.98□□□□□ -0.65
APOC1-202ENST00000588750 ANP32CO43423 234 aa10.97□□□□□ -0.65
APOC1-202ENST00000588750 NEFMP07197 916 aa10.97□□□□□ -0.65
APOC1-202ENST00000588750 ZCRB1Q8TBF4 217 aaKnown RBP10.97□□□□□ -0.65
APOC1-202ENST00000588750 EYA1Q99502 592 aa10.97□□□□□ -0.65
APOC1-202ENST00000588750 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.65
APOC1-202ENST00000588750 IGSF1Q8N6C5 1336 aa10.97□□□□□ -0.65
APOC1-202ENST00000588750 MYBBP1AQ9BQG0 1328 aaKnown RBP10.97□□□□□ -0.65
APOC1-202ENST00000588750 BRWD3Q6RI45 1802 aa10.97□□□□□ -0.65
APOC1-202ENST00000588750 LRRC37A3O60309 1634 aa10.96□□□□□ -0.65
APOC1-202ENST00000588750 NCAPD2Q15021 1401 aa10.96□□□□□ -0.65
APOC1-202ENST00000588750 PCDH11XQ9BZA7 1347 aa10.96□□□□□ -0.65
APOC1-202ENST00000588750 PCDH11YQ9BZA8 1340 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms