RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
SDF2-207ENST00000588472 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
SDF2-207ENST00000588472 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.44
SDF2-207ENST00000588472 R3HDM1Q15032 1099 aaKnown RBP12.33□□□□□ -0.44
SDF2-207ENST00000588472 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
SDF2-207ENST00000588472 TCP11L2Q8N4U5 519 aa12.33□□□□□ -0.44
SDF2-207ENST00000588472 EDC4Q6P2E9 1401 aaKnown RBP12.33□□□□□ -0.44
SDF2-207ENST00000588472 PDE3BQ13370 1112 aa12.32□□□□□ -0.44
SDF2-207ENST00000588472 COL5A2P05997 1499 aaPredicted RBP12.32□□□□□ -0.44
SDF2-207ENST00000588472 LMO7Q8WWI1 1683 aa12.32□□□□□ -0.44
SDF2-207ENST00000588472 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
SDF2-207ENST00000588472 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
SDF2-207ENST00000588472 COG3Q96JB2 828 aa12.31□□□□□ -0.44
SDF2-207ENST00000588472 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
SDF2-207ENST00000588472 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
SDF2-207ENST00000588472 FBLN1P23142 703 aa12.3□□□□□ -0.44
SDF2-207ENST00000588472 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
SDF2-207ENST00000588472 CRB1P82279 1406 aa12.29□□□□□ -0.44
SDF2-207ENST00000588472 NFAT5O94916 1531 aa12.29□□□□□ -0.44
SDF2-207ENST00000588472 BARGINQ6ZT62 677 aa12.29□□□□□ -0.44
SDF2-207ENST00000588472 LTV1Q96GA3 475 aaPredicted RBP12.29□□□□□ -0.44
SDF2-207ENST00000588472 GGNBP2Q9H3C7 697 aa12.29□□□□□ -0.44
SDF2-207ENST00000588472 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
SDF2-207ENST00000588472 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
SDF2-207ENST00000588472 RGPD5Q99666 1765 aa12.28□□□□□ -0.44
SDF2-207ENST00000588472 YY1P25490 414 aa12.28□□□□□ -0.44
SDF2-207ENST00000588472 NLRP2Q9NX02 1062 aa12.28□□□□□ -0.44
SDF2-207ENST00000588472 COL18A1P39060 1754 aa12.28□□□□□ -0.44
SDF2-207ENST00000588472 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
SDF2-207ENST00000588472 THSD7AQ9UPZ6 1657 aa12.27□□□□□ -0.45
SDF2-207ENST00000588472 TRIM37O94972 964 aa12.27□□□□□ -0.45
SDF2-207ENST00000588472 EZH2Q15910 746 aaKnown RBP12.27□□□□□ -0.45
SDF2-207ENST00000588472 FYB1O15117 783 aa12.26□□□□□ -0.45
SDF2-207ENST00000588472 AMPHP49418 695 aa12.26□□□□□ -0.45
SDF2-207ENST00000588472 DDB1Q16531 1140 aa12.26□□□□□ -0.45
SDF2-207ENST00000588472 FAM196AQ6ZSG2 479 aa12.26□□□□□ -0.45
SDF2-207ENST00000588472 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
SDF2-207ENST00000588472 ANKRD24Q8TF21 1146 aa12.26□□□□□ -0.45
SDF2-207ENST00000588472 CARD10Q9BWT7 1032 aa12.26□□□□□ -0.45
SDF2-207ENST00000588472 CARD14Q9BXL6 1004 aa12.26□□□□□ -0.45
SDF2-207ENST00000588472 RRS1Q15050 365 aaKnown RBP12.25□□□□□ -0.45
SDF2-207ENST00000588472 OVOS2A0A0J9YW53 1432 aa12.25□□□□□ -0.45
SDF2-207ENST00000588472 OVOS2Q6IE36 1432 aa12.25□□□□□ -0.45
SDF2-207ENST00000588472 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
SDF2-207ENST00000588472 LTN1O94822 1766 aa12.25□□□□□ -0.45
SDF2-207ENST00000588472 IP6K1Q92551 441 aa12.24□□□□□ -0.45
SDF2-207ENST00000588472 NSD3Q9BZ95 1437 aa12.23□□□□□ -0.45
SDF2-207ENST00000588472 PARD3Q8TEW0 1356 aa12.23□□□□□ -0.45
SDF2-207ENST00000588472 MAP3K19Q56UN5 1328 aa12.23□□□□□ -0.45
SDF2-207ENST00000588472 DCAF8L1A6NGE4 600 aa12.23□□□□□ -0.45
SDF2-207ENST00000588472 APBA3O96018 575 aa12.23□□□□□ -0.45
SDF2-207ENST00000588472 CAMKK2Q96RR4 588 aa12.23□□□□□ -0.45
SDF2-207ENST00000588472 ERBB3P21860 1342 aa12.22□□□□□ -0.45
SDF2-207ENST00000588472 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
SDF2-207ENST00000588472 EXOC5O00471 708 aa12.22□□□□□ -0.45
SDF2-207ENST00000588472 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
SDF2-207ENST00000588472 NBPF14Q5TI25 921 aa12.22□□□□□ -0.45
SDF2-207ENST00000588472 PANK3Q9H999 370 aa12.22□□□□□ -0.45
SDF2-207ENST00000588472 PPP1R1BQ9UD71 204 aaPredicted RBP12.22□□□□□ -0.45
SDF2-207ENST00000588472 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
SDF2-207ENST00000588472 HOXC9P31274 260 aa12.21□□□□□ -0.45
SDF2-207ENST00000588472 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.45
SDF2-207ENST00000588472 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
SDF2-207ENST00000588472 MYOM1P52179 1685 aa12.21□□□□□ -0.45
SDF2-207ENST00000588472 CCDC7Q96M83 1385 aa12.2□□□□□ -0.46
SDF2-207ENST00000588472 MARCH10Q8NA82 808 aaPredicted RBP12.2□□□□□ -0.46
SDF2-207ENST00000588472 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
SDF2-207ENST00000588472 CGNL1Q0VF96 1302 aa12.19□□□□□ -0.46
SDF2-207ENST00000588472 IL2RBP14784 551 aa12.19□□□□□ -0.46
SDF2-207ENST00000588472 KIF20BQ96Q89 1820 aa12.18□□□□□ -0.46
SDF2-207ENST00000588472 ABCC6O95255 1503 aa12.18□□□□□ -0.46
SDF2-207ENST00000588472 TNS1Q9HBL0 1735 aaKnown RBP12.18□□□□□ -0.46
SDF2-207ENST00000588472 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
SDF2-207ENST00000588472 SPON1Q9HCB6 807 aa12.18□□□□□ -0.46
SDF2-207ENST00000588472 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
SDF2-207ENST00000588472 PTF1AQ7RTS3 328 aa12.17□□□□□ -0.46
SDF2-207ENST00000588472 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
SDF2-207ENST00000588472 DDX54Q8TDD1 881 aaKnown RBP12.17□□□□□ -0.46
SDF2-207ENST00000588472 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
SDF2-207ENST00000588472 OVOS2A0A0G2JMS6 1433 aa12.17□□□□□ -0.46
SDF2-207ENST00000588472 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
SDF2-207ENST00000588472 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
SDF2-207ENST00000588472 WNK3Q9BYP7 1800 aa12.16□□□□□ -0.46
SDF2-207ENST00000588472 KCNQ2O43526 872 aa12.15□□□□□ -0.46
SDF2-207ENST00000588472 NBPF6Q5VWK0 638 aa12.15□□□□□ -0.46
SDF2-207ENST00000588472 NBPF4Q96M43 638 aa12.15□□□□□ -0.46
SDF2-207ENST00000588472 KIF7Q2M1P5 1343 aa12.14□□□□□ -0.47
SDF2-207ENST00000588472 SMG6Q86US8 1419 aaKnown RBP12.14□□□□□ -0.47
SDF2-207ENST00000588472 KNSTRNQ9Y448 316 aa12.14□□□□□ -0.47
SDF2-207ENST00000588472 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
SDF2-207ENST00000588472 TNS2Q63HR2 1409 aa12.13□□□□□ -0.47
SDF2-207ENST00000588472 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
SDF2-207ENST00000588472 MORC1Q86VD1 984 aa12.13□□□□□ -0.47
SDF2-207ENST00000588472 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
SDF2-207ENST00000588472 FLT4P35916 1363 aa12.13□□□□□ -0.47
SDF2-207ENST00000588472 PEAK1Q9H792 1746 aa12.12□□□□□ -0.47
SDF2-207ENST00000588472 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
SDF2-207ENST00000588472 INSRP06213 1382 aa12.12□□□□□ -0.47
SDF2-207ENST00000588472 ZCRB1Q8TBF4 217 aaKnown RBP12.11□□□□□ -0.47
SDF2-207ENST00000588472 SYTL4Q96C24 671 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms