RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
TMED1-202ENST00000586835 USP31Q70CQ4 1352 aa18.81■□□□□ 0.6
TMED1-202ENST00000586835 PPP2R1AP30153 589 aa18.8■□□□□ 0.6
TMED1-202ENST00000586835 MORC1Q86VD1 984 aa18.79■□□□□ 0.6
TMED1-202ENST00000586835 NME9Q86XW9 330 aa18.79■□□□□ 0.6
TMED1-202ENST00000586835 KCNH5Q8NCM2 988 aa18.79■□□□□ 0.6
TMED1-202ENST00000586835 ZRANB1Q9UGI0 708 aa18.79■□□□□ 0.6
TMED1-202ENST00000586835 ONECUT3O60422 494 aaPredicted RBP18.78■□□□□ 0.6
TMED1-202ENST00000586835 LMO7Q8WWI1 1683 aa18.78■□□□□ 0.6
TMED1-202ENST00000586835 CAMTA1Q9Y6Y1 1673 aa18.78■□□□□ 0.6
TMED1-202ENST00000586835 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.6
TMED1-202ENST00000586835 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.6
TMED1-202ENST00000586835 USP54Q70EL1 1684 aa18.77■□□□□ 0.6
TMED1-202ENST00000586835 ARHGEF25Q86VW2 580 aa18.76■□□□□ 0.59
TMED1-202ENST00000586835 PNISRQ8TF01 805 aaKnown RBP18.76■□□□□ 0.59
TMED1-202ENST00000586835 UPF1Q92900 1129 aaKnown RBP eCLIP18.76■□□□□ 0.594e-20■■■■■ 43.3
TMED1-202ENST00000586835 STRN4Q9NRL3 753 aa18.76■□□□□ 0.59
TMED1-202ENST00000586835 AATKQ6ZMQ8 1374 aa18.76■□□□□ 0.59
TMED1-202ENST00000586835 EVA1CP58658 441 aa18.75■□□□□ 0.59
TMED1-202ENST00000586835 NFAT5O94916 1531 aa18.74■□□□□ 0.59
TMED1-202ENST00000586835 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
TMED1-202ENST00000586835 CCDC184Q52MB2 194 aa18.74■□□□□ 0.59
TMED1-202ENST00000586835 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
TMED1-202ENST00000586835 SPATA31A1Q5TZJ5 1347 aa18.74■□□□□ 0.59
TMED1-202ENST00000586835 SOX12O15370 315 aa18.73■□□□□ 0.59
TMED1-202ENST00000586835 COL18A1P39060 1754 aa18.73■□□□□ 0.59
TMED1-202ENST00000586835 FAM98CQ17RN3 349 aaKnown RBP18.72■□□□□ 0.59
TMED1-202ENST00000586835 OVOS2A0A0J9YW53 1432 aa18.72■□□□□ 0.59
TMED1-202ENST00000586835 OVOS2Q6IE36 1432 aa18.72■□□□□ 0.59
TMED1-202ENST00000586835 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
TMED1-202ENST00000586835 LARP1Q6PKG0 1096 aaKnown RBP18.71■□□□□ 0.59
TMED1-202ENST00000586835 AXIN2Q9Y2T1 843 aa18.71■□□□□ 0.59
TMED1-202ENST00000586835 COG3Q96JB2 828 aa18.7■□□□□ 0.58
TMED1-202ENST00000586835 GGNBP2Q9H3C7 697 aa18.7■□□□□ 0.58
TMED1-202ENST00000586835 BRWD3Q6RI45 1802 aa18.7■□□□□ 0.58
TMED1-202ENST00000586835 CNGB1Q14028 1251 aaPredicted RBP18.69■□□□□ 0.58
TMED1-202ENST00000586835 SMG6Q86US8 1419 aaKnown RBP18.68■□□□□ 0.58
TMED1-202ENST00000586835 MAP2P11137 1827 aaKnown RBP18.68■□□□□ 0.58
TMED1-202ENST00000586835 A0A0G2JS52 829 aa18.67■□□□□ 0.58
TMED1-202ENST00000586835 MYT1Q01538 1121 aa18.67■□□□□ 0.58
TMED1-202ENST00000586835 BARGINQ6ZT62 677 aa18.67■□□□□ 0.58
TMED1-202ENST00000586835 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
TMED1-202ENST00000586835 USP35Q9P2H5 1018 aa18.67■□□□□ 0.58
TMED1-202ENST00000586835 THSD7AQ9UPZ6 1657 aa18.66■□□□□ 0.58
TMED1-202ENST00000586835 ABCC6O95255 1503 aa18.66■□□□□ 0.58
TMED1-202ENST00000586835 KRT27Q7Z3Y8 459 aa18.66■□□□□ 0.58
TMED1-202ENST00000586835 TCP11L2Q8N4U5 519 aa18.66■□□□□ 0.58
TMED1-202ENST00000586835 CRB1P82279 1406 aa18.66■□□□□ 0.58
TMED1-202ENST00000586835 RGPD5Q99666 1765 aa18.65■□□□□ 0.58
TMED1-202ENST00000586835 MTHFSP49914 203 aa18.65■□□□□ 0.58
TMED1-202ENST00000586835 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
TMED1-202ENST00000586835 WDR17Q8IZU2 1322 aa18.65■□□□□ 0.58
TMED1-202ENST00000586835 KIF24Q5T7B8 1368 aa18.65■□□□□ 0.58
TMED1-202ENST00000586835 LTN1O94822 1766 aa18.64■□□□□ 0.57
TMED1-202ENST00000586835 CENPBP07199 599 aaPredicted RBP18.63■□□□□ 0.57
TMED1-202ENST00000586835 TOM1L2Q6ZVM7 507 aa18.63■□□□□ 0.57
TMED1-202ENST00000586835 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
TMED1-202ENST00000586835 CCDC125Q86Z20 511 aa18.61■□□□□ 0.57
TMED1-202ENST00000586835 POLKQ9UBT6 870 aa18.61■□□□□ 0.57
TMED1-202ENST00000586835 COL3A1P02461 1466 aaPredicted RBP18.6■□□□□ 0.57
TMED1-202ENST00000586835 BLMP54132 1417 aaPredicted RBP18.6■□□□□ 0.57
TMED1-202ENST00000586835 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
TMED1-202ENST00000586835 FBLN1P23142 703 aa18.6■□□□□ 0.57
TMED1-202ENST00000586835 WDR43Q15061 677 aaKnown RBP eCLIP18.6■□□□□ 0.57
TMED1-202ENST00000586835 IP6K1Q92551 441 aa18.6■□□□□ 0.57
TMED1-202ENST00000586835 CARD10Q9BWT7 1032 aa18.6■□□□□ 0.57
TMED1-202ENST00000586835 ERBB3P21860 1342 aa18.59■□□□□ 0.57
TMED1-202ENST00000586835 MAP3K19Q56UN5 1328 aa18.59■□□□□ 0.57
TMED1-202ENST00000586835 TNNT2P45379 298 aaPredicted RBP18.58■□□□□ 0.56
TMED1-202ENST00000586835 NGEFQ8N5V2 710 aa18.58■□□□□ 0.56
TMED1-202ENST00000586835 NUDCQ9Y266 331 aa18.58■□□□□ 0.56
TMED1-202ENST00000586835 ANKRD24Q8TF21 1146 aa18.57■□□□□ 0.56
TMED1-202ENST00000586835 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
TMED1-202ENST00000586835 EP400Q96L91 3159 aa18.56■□□□□ 0.56
TMED1-202ENST00000586835 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
TMED1-202ENST00000586835 NCBP3Q53F19 620 aaKnown RBP18.56■□□□□ 0.56
TMED1-202ENST00000586835 FAM182BQ5T319 152 aa18.56■□□□□ 0.56
TMED1-202ENST00000586835 PARP4Q9UKK3 1724 aaKnown RBP18.55■□□□□ 0.56
TMED1-202ENST00000586835 HOXC9P31274 260 aa18.55■□□□□ 0.56
TMED1-202ENST00000586835 AMPHP49418 695 aa18.55■□□□□ 0.56
TMED1-202ENST00000586835 PDE3BQ13370 1112 aa18.55■□□□□ 0.56
TMED1-202ENST00000586835 RRS1Q15050 365 aaKnown RBP18.55■□□□□ 0.56
TMED1-202ENST00000586835 CDCA7Q9BWT1 371 aaPredicted RBP18.55■□□□□ 0.56
TMED1-202ENST00000586835 ADAMTS8Q9UP79 889 aa18.55■□□□□ 0.56
TMED1-202ENST00000586835 SRCAPQ6ZRS2 3230 aa18.54■□□□□ 0.56
TMED1-202ENST00000586835 HNRNPUQ00839 825 aaKnown RBP eCLIP18.54■□□□□ 0.56
TMED1-202ENST00000586835 NLRP2Q9NX02 1062 aa18.54■□□□□ 0.56
TMED1-202ENST00000586835 RTL1A6NKG5 1358 aa18.54■□□□□ 0.56
TMED1-202ENST00000586835 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
TMED1-202ENST00000586835 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
TMED1-202ENST00000586835 PNNQ9H307 717 aaKnown RBP18.53■□□□□ 0.56
TMED1-202ENST00000586835 DISP2A7MBM2 1401 aa18.52■□□□□ 0.56
TMED1-202ENST00000586835 WNK3Q9BYP7 1800 aa18.52■□□□□ 0.56
TMED1-202ENST00000586835 DDB1Q16531 1140 aa18.52■□□□□ 0.56
TMED1-202ENST00000586835 LTV1Q96GA3 475 aaPredicted RBP18.51■□□□□ 0.55
TMED1-202ENST00000586835 FLT4P35916 1363 aa18.51■□□□□ 0.55
TMED1-202ENST00000586835 SF3B2Q13435 895 aaKnown RBP18.5■□□□□ 0.55
TMED1-202ENST00000586835 EMILIN1Q9Y6C2 1016 aa18.5■□□□□ 0.55
TMED1-202ENST00000586835 LRRC37A3O60309 1634 aa18.49■□□□□ 0.55
TMED1-202ENST00000586835 PEAK1Q9H792 1746 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms