RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 CNGB1Q14028 1251 aaPredicted RBP29.37■■■□□ 2.29
RETREG3-204ENST00000586796 RRS1Q15050 365 aaKnown RBP29.37■■■□□ 2.29
RETREG3-204ENST00000586796 PER1O15534 1290 aaPredicted RBP29.35■■■□□ 2.29
RETREG3-204ENST00000586796 LARP1Q6PKG0 1096 aaKnown RBP29.35■■■□□ 2.29
RETREG3-204ENST00000586796 MAP3K19Q56UN5 1328 aa29.35■■■□□ 2.29
RETREG3-204ENST00000586796 AMPHP49418 695 aa29.34■■■□□ 2.29
RETREG3-204ENST00000586796 USP35Q9P2H5 1018 aa29.34■■■□□ 2.29
RETREG3-204ENST00000586796 COL5A2P05997 1499 aaPredicted RBP29.33■■■□□ 2.29
RETREG3-204ENST00000586796 LTN1O94822 1766 aa29.33■■■□□ 2.29
RETREG3-204ENST00000586796 COL18A1P39060 1754 aa29.33■■■□□ 2.29
RETREG3-204ENST00000586796 CSB-PGBD3P0DP91 1061 aa29.32■■■□□ 2.28
RETREG3-204ENST00000586796 AMER1Q5JTC6 1135 aaPredicted RBP29.32■■■□□ 2.28
RETREG3-204ENST00000586796 CC2D1BQ5T0F9 858 aaKnown RBP29.32■■■□□ 2.28
RETREG3-204ENST00000586796 MORC1Q86VD1 984 aa29.32■■■□□ 2.28
RETREG3-204ENST00000586796 NSD2O96028 1365 aa29.31■■■□□ 2.28
RETREG3-204ENST00000586796 SPATA31A5Q5VU36 1347 aa29.3■■■□□ 2.28
RETREG3-204ENST00000586796 SPATA31A7Q8IWB4 1347 aa29.3■■■□□ 2.28
RETREG3-204ENST00000586796 PPM1GO15355 546 aaPredicted RBP29.29■■■□□ 2.28
RETREG3-204ENST00000586796 IP6K1Q92551 441 aa29.29■■■□□ 2.28
RETREG3-204ENST00000586796 GLI3P10071 1580 aa29.29■■■□□ 2.28
RETREG3-204ENST00000586796 HOXC9P31274 260 aa29.28■■■□□ 2.28
RETREG3-204ENST00000586796 TOM1L2Q6ZVM7 507 aa29.28■■■□□ 2.28
RETREG3-204ENST00000586796 LTV1Q96GA3 475 aaPredicted RBP29.28■■■□□ 2.28
RETREG3-204ENST00000586796 RGPD5Q99666 1765 aa29.28■■■□□ 2.28
RETREG3-204ENST00000586796 SPATA31A1Q5TZJ5 1347 aa29.27■■■□□ 2.28
RETREG3-204ENST00000586796 A0A0G2JS52 829 aa29.27■■■□□ 2.28
RETREG3-204ENST00000586796 MYT1Q01538 1121 aa29.27■■■□□ 2.28
RETREG3-204ENST00000586796 EMILIN1Q9Y6C2 1016 aa29.27■■■□□ 2.28
RETREG3-204ENST00000586796 ANKRD26Q9UPS8 1709 aa29.27■■■□□ 2.28
RETREG3-204ENST00000586796 DDX10Q13206 875 aaKnown RBP29.26■■■□□ 2.27
RETREG3-204ENST00000586796 FAM98CQ17RN3 349 aaKnown RBP29.26■■■□□ 2.27
RETREG3-204ENST00000586796 ANKRD24Q8TF21 1146 aa29.26■■■□□ 2.27
RETREG3-204ENST00000586796 WDR17Q8IZU2 1322 aa29.25■■■□□ 2.27
RETREG3-204ENST00000586796 RGS12O14924 1447 aa29.25■■■□□ 2.27
RETREG3-204ENST00000586796 ABCC6O95255 1503 aa29.25■■■□□ 2.27
RETREG3-204ENST00000586796 CRB1P82279 1406 aa29.23■■■□□ 2.27
RETREG3-204ENST00000586796 BLMP54132 1417 aaPredicted RBP29.22■■■□□ 2.27
RETREG3-204ENST00000586796 CDK12Q9NYV4 1490 aaPredicted RBP29.22■■■□□ 2.27
RETREG3-204ENST00000586796 ERBB3P21860 1342 aa29.21■■■□□ 2.27
RETREG3-204ENST00000586796 TCP11L2Q8N4U5 519 aa29.21■■■□□ 2.27
RETREG3-204ENST00000586796 NLRP2Q9NX02 1062 aa29.21■■■□□ 2.27
RETREG3-204ENST00000586796 POLKQ9UBT6 870 aa29.21■■■□□ 2.27
RETREG3-204ENST00000586796 RTL1A6NKG5 1358 aa29.21■■■□□ 2.27
RETREG3-204ENST00000586796 HSP90AB2PQ58FF8 381 aa29.2■■■□□ 2.26
RETREG3-204ENST00000586796 SEPT12Q8IYM1 358 aa29.2■■■□□ 2.26
RETREG3-204ENST00000586796 FLT4P35916 1363 aa29.18■■■□□ 2.26
RETREG3-204ENST00000586796 PEAK1Q9H792 1746 aa29.18■■■□□ 2.26
RETREG3-204ENST00000586796 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
RETREG3-204ENST00000586796 NPC1L1Q9UHC9 1359 aa29.16■■■□□ 2.26
RETREG3-204ENST00000586796 ONECUT3O60422 494 aaPredicted RBP29.16■■■□□ 2.26
RETREG3-204ENST00000586796 CARD10Q9BWT7 1032 aa29.16■■■□□ 2.26
RETREG3-204ENST00000586796 MAP2P11137 1827 aaKnown RBP29.15■■■□□ 2.26
RETREG3-204ENST00000586796 KIF24Q5T7B8 1368 aa29.15■■■□□ 2.26
RETREG3-204ENST00000586796 THRAP3Q9Y2W1 955 aaKnown RBP29.15■■■□□ 2.26
RETREG3-204ENST00000586796 BARGINQ6ZT62 677 aa29.14■■■□□ 2.26
RETREG3-204ENST00000586796 INSRP06213 1382 aa29.13■■■□□ 2.25
RETREG3-204ENST00000586796 SMG6Q86US8 1419 aaKnown RBP29.11■■■□□ 2.25
RETREG3-204ENST00000586796 MTHFSP49914 203 aa29.07■■■□□ 2.24
RETREG3-204ENST00000586796 NBPF6Q5VWK0 638 aa29.07■■■□□ 2.24
RETREG3-204ENST00000586796 KRT27Q7Z3Y8 459 aa29.07■■■□□ 2.24
RETREG3-204ENST00000586796 NBPF4Q96M43 638 aa29.07■■■□□ 2.24
RETREG3-204ENST00000586796 USHBP1Q8N6Y0 703 aa29.06■■■□□ 2.24
RETREG3-204ENST00000586796 THSD7AQ9UPZ6 1657 aa29.05■■■□□ 2.24
RETREG3-204ENST00000586796 EIF4A2Q14240 407 aaKnown RBP29.04■■■□□ 2.24
RETREG3-204ENST00000586796 BRWD3Q6RI45 1802 aa29.04■■■□□ 2.24
RETREG3-204ENST00000586796 FAM208AQ9UK61 1670 aaKnown RBP29.02■■■□□ 2.24
RETREG3-204ENST00000586796 SOCS7O14512 581 aa29.02■■■□□ 2.24
RETREG3-204ENST00000586796 IL2RBP14784 551 aa29.02■■■□□ 2.24
RETREG3-204ENST00000586796 PDE3BQ13370 1112 aa29.02■■■□□ 2.24
RETREG3-204ENST00000586796 FAM182BQ5T319 152 aa29.02■■■□□ 2.24
RETREG3-204ENST00000586796 CDCA7Q9BWT1 371 aaPredicted RBP29.02■■■□□ 2.24
RETREG3-204ENST00000586796 RGPD2P0DJD1 1756 aa29.02■■■□□ 2.24
RETREG3-204ENST00000586796 DDB1Q16531 1140 aa29.01■■■□□ 2.23
RETREG3-204ENST00000586796 DISP2A7MBM2 1401 aa28.99■■■□□ 2.23
RETREG3-204ENST00000586796 PPP2R1AP30153 589 aa28.98■■■□□ 2.23
RETREG3-204ENST00000586796 EYA1Q99502 592 aa28.98■■■□□ 2.23
RETREG3-204ENST00000586796 EXOC5O00471 708 aa28.97■■■□□ 2.23
RETREG3-204ENST00000586796 WNK3Q9BYP7 1800 aa28.97■■■□□ 2.23
RETREG3-204ENST00000586796 PARP4Q9UKK3 1724 aaKnown RBP28.95■■■□□ 2.23
RETREG3-204ENST00000586796 RAPGEF4Q8WZA2 1011 aa28.94■■■□□ 2.22
RETREG3-204ENST00000586796 LRRC37A3O60309 1634 aa28.94■■■□□ 2.22
RETREG3-204ENST00000586796 PARD3Q8TEW0 1356 aa28.93■■■□□ 2.22
RETREG3-204ENST00000586796 IL13P35225 146 aa28.92■■■□□ 2.22
RETREG3-204ENST00000586796 DIAPH1O60610 1272 aaKnown RBP28.91■■■□□ 2.22
RETREG3-204ENST00000586796 TATP17735 454 aaPredicted RBP28.91■■■□□ 2.22
RETREG3-204ENST00000586796 MEGF6O75095 1541 aa28.9■■■□□ 2.22
RETREG3-204ENST00000586796 RALBP1Q15311 655 aa28.9■■■□□ 2.22
RETREG3-204ENST00000586796 UPF1Q92900 1129 aaKnown RBP eCLIP28.9■■■□□ 2.22
RETREG3-204ENST00000586796 CFAP53Q96M91 514 aa28.9■■■□□ 2.22
RETREG3-204ENST00000586796 TNS2Q63HR2 1409 aa28.88■■■□□ 2.21
RETREG3-204ENST00000586796 MARCH10Q8NA82 808 aaPredicted RBP28.88■■■□□ 2.21
RETREG3-204ENST00000586796 IGSF1Q8N6C5 1336 aa28.88■■■□□ 2.21
RETREG3-204ENST00000586796 DDX54Q8TDD1 881 aaKnown RBP28.87■■■□□ 2.21
RETREG3-204ENST00000586796 FAM196AQ6ZSG2 479 aa28.86■■■□□ 2.21
RETREG3-204ENST00000586796 ZCRB1Q8TBF4 217 aaKnown RBP28.86■■■□□ 2.21
RETREG3-204ENST00000586796 SULT6B1Q6IMI4 303 aa28.85■■■□□ 2.21
RETREG3-204ENST00000586796 AEBP1Q8IUX7 1158 aa28.85■■■□□ 2.21
RETREG3-204ENST00000586796 OVOS2A0A0G2JMS6 1433 aa28.85■■■□□ 2.21
RETREG3-204ENST00000586796 U2SURPO15042 1029 aaKnown RBP28.84■■■□□ 2.21
RETREG3-204ENST00000586796 NCAPD2Q15021 1401 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms