RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 RNFT1Q5M7Z0 435 aa9.77□□□□□ -0.85
ZNF540-204ENST00000586792 RIC3Q7Z5B4 369 aa9.77□□□□□ -0.85
ZNF540-204ENST00000586792 KDM2AQ9Y2K7 1162 aa9.77□□□□□ -0.85
ZNF540-204ENST00000586792 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
ZNF540-204ENST00000586792 ITGA6P23229 1130 aa9.76□□□□□ -0.85
ZNF540-204ENST00000586792 Q6ZVU0 165 aa9.76□□□□□ -0.85
ZNF540-204ENST00000586792 MAGEB6P1A0A0J9YX57 407 aa9.75□□□□□ -0.85
ZNF540-204ENST00000586792 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
ZNF540-204ENST00000586792 VWA5B2Q8N398 1253 aa9.75□□□□□ -0.85
ZNF540-204ENST00000586792 TSC1Q92574 1164 aa9.75□□□□□ -0.85
ZNF540-204ENST00000586792 GPKOWQ92917 476 aaPredicted RBP eCLIP9.75□□□□□ -0.85
ZNF540-204ENST00000586792 CDC14CA4D256 554 aa9.74□□□□□ -0.85
ZNF540-204ENST00000586792 BARGINQ6ZT62 677 aa9.74□□□□□ -0.85
ZNF540-204ENST00000586792 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.74□□□□□ -0.85
ZNF540-204ENST00000586792 WHAMMQ8TF30 809 aa9.74□□□□□ -0.85
ZNF540-204ENST00000586792 NUTM2BA6NNL0 878 aaPredicted RBP9.73□□□□□ -0.85
ZNF540-204ENST00000586792 NUTM2EB1AL46 878 aaPredicted RBP9.73□□□□□ -0.85
ZNF540-204ENST00000586792 PPP1R26Q5T8A7 1209 aaPredicted RBP9.73□□□□□ -0.85
ZNF540-204ENST00000586792 NUTM2DQ5VT03 806 aaPredicted RBP9.73□□□□□ -0.85
ZNF540-204ENST00000586792 NUTM2AQ8IVF1 878 aaPredicted RBP9.73□□□□□ -0.85
ZNF540-204ENST00000586792 CABLES1Q8TDN4 633 aa9.73□□□□□ -0.85
ZNF540-204ENST00000586792 MAP3K10Q02779 954 aa9.72□□□□□ -0.85
ZNF540-204ENST00000586792 CDV3Q9UKY7 258 aaKnown RBP9.72□□□□□ -0.85
ZNF540-204ENST00000586792 DHX9Q08211 1270 aaKnown RBP9.71□□□□□ -0.86
ZNF540-204ENST00000586792 CSPP1Q1MSJ5 1256 aa9.71□□□□□ -0.86
ZNF540-204ENST00000586792 HELBQ8NG08 1087 aaPredicted RBP9.71□□□□□ -0.86
ZNF540-204ENST00000586792 ENAMQ9NRM1 1142 aa9.71□□□□□ -0.86
ZNF540-204ENST00000586792 CBLBQ13191 982 aa9.7□□□□□ -0.86
ZNF540-204ENST00000586792 ZMYND10O75800 440 aa9.69□□□□□ -0.86
ZNF540-204ENST00000586792 TUSC1Q2TAM9 212 aa9.69□□□□□ -0.86
ZNF540-204ENST00000586792 ERFEQ4G0M1 354 aa9.69□□□□□ -0.86
ZNF540-204ENST00000586792 CARD14Q9BXL6 1004 aa9.69□□□□□ -0.86
ZNF540-204ENST00000586792 ADAMTS2O95450 1211 aa9.68□□□□□ -0.86
ZNF540-204ENST00000586792 SRSF11Q05519 484 aaKnown RBP9.68□□□□□ -0.86
ZNF540-204ENST00000586792 MSTNO14793 375 aa9.66□□□□□ -0.86
ZNF540-204ENST00000586792 LYPD4Q6UWN0 246 aa9.66□□□□□ -0.86
ZNF540-204ENST00000586792 PARP9Q8IXQ6 854 aa9.66□□□□□ -0.86
ZNF540-204ENST00000586792 KCTD15Q96SI1 283 aaPredicted RBP9.66□□□□□ -0.86
ZNF540-204ENST00000586792 PHF20L1A8MW92 1017 aa9.65□□□□□ -0.86
ZNF540-204ENST00000586792 LILRB3O75022 631 aa9.65□□□□□ -0.86
ZNF540-204ENST00000586792 CTSOP43234 321 aaPredicted RBP9.65□□□□□ -0.86
ZNF540-204ENST00000586792 SLC10A4Q96EP9 437 aa9.65□□□□□ -0.86
ZNF540-204ENST00000586792 POLMQ9NP87 494 aaPredicted RBP9.65□□□□□ -0.86
ZNF540-204ENST00000586792 PDXDC2PQ6P474 469 aa9.64□□□□□ -0.87
ZNF540-204ENST00000586792 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
ZNF540-204ENST00000586792 INSM2Q96T92 566 aaPredicted RBP9.64□□□□□ -0.87
ZNF540-204ENST00000586792 CELA2BP08218 269 aaPredicted RBP9.63□□□□□ -0.87
ZNF540-204ENST00000586792 RELBQ01201 579 aa9.63□□□□□ -0.87
ZNF540-204ENST00000586792 QPCTQ16769 361 aa9.63□□□□□ -0.87
ZNF540-204ENST00000586792 ARHGAP9Q9BRR9 750 aa9.63□□□□□ -0.87
ZNF540-204ENST00000586792 ABCC9O60706 1549 aa9.62□□□□□ -0.87
ZNF540-204ENST00000586792 ADAM23O75077 832 aa9.62□□□□□ -0.87
ZNF540-204ENST00000586792 XP32Q5T750 250 aa9.62□□□□□ -0.87
ZNF540-204ENST00000586792 RNF217Q8TC41 542 aa9.62□□□□□ -0.87
ZNF540-204ENST00000586792 AGBL1Q96MI9 1066 aa9.62□□□□□ -0.87
ZNF540-204ENST00000586792 LIMD1Q9UGP4 676 aa9.62□□□□□ -0.87
ZNF540-204ENST00000586792 ZBTB33Q86T24 672 aa9.61□□□□□ -0.87
ZNF540-204ENST00000586792 BEND7Q8N7W2 519 aaPredicted RBP9.61□□□□□ -0.87
ZNF540-204ENST00000586792 SENP3-EIF4A1A0A087X0R7 540 aa9.6□□□□□ -0.87
ZNF540-204ENST00000586792 PLA2G4EQ3MJ16 856 aa9.6□□□□□ -0.87
ZNF540-204ENST00000586792 MYSM1Q5VVJ2 828 aa9.6□□□□□ -0.87
ZNF540-204ENST00000586792 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
ZNF540-204ENST00000586792 ZC3H15Q8WU90 426 aaKnown RBP9.59□□□□□ -0.87
ZNF540-204ENST00000586792 GMCL1Q96IK5 515 aa9.59□□□□□ -0.87
ZNF540-204ENST00000586792 DCAF5Q96JK2 942 aa9.59□□□□□ -0.87
ZNF540-204ENST00000586792 TRIM66O15016 1216 aa9.58□□□□□ -0.88
ZNF540-204ENST00000586792 FOXR1Q6PIV2 292 aa9.58□□□□□ -0.88
ZNF540-204ENST00000586792 SPOCK3Q9BQ16 436 aa9.58□□□□□ -0.88
ZNF540-204ENST00000586792 ZNF395Q9H8N7 513 aaPredicted RBP9.58□□□□□ -0.88
ZNF540-204ENST00000586792 RTL5Q5HYW3 569 aaPredicted RBP9.57□□□□□ -0.88
ZNF540-204ENST00000586792 INTS6LQ5JSJ4 861 aaKnown RBP9.57□□□□□ -0.88
ZNF540-204ENST00000586792 FKBPLQ9UIM3 349 aa9.57□□□□□ -0.88
ZNF540-204ENST00000586792 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
ZNF540-204ENST00000586792 GAS6Q14393 721 aa9.56□□□□□ -0.88
ZNF540-204ENST00000586792 LYSMD3Q7Z3D4 306 aa9.56□□□□□ -0.88
ZNF540-204ENST00000586792 TRIM52Q96A61 297 aa9.56□□□□□ -0.88
ZNF540-204ENST00000586792 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
ZNF540-204ENST00000586792 NBPF20Q3BBV1 942 aa9.55□□□□□ -0.88
ZNF540-204ENST00000586792 GALNT6Q8NCL4 622 aa9.55□□□□□ -0.88
ZNF540-204ENST00000586792 AK7Q96M32 723 aa9.55□□□□□ -0.88
ZNF540-204ENST00000586792 CNTNAP5Q8WYK1 1306 aa9.55□□□□□ -0.88
ZNF540-204ENST00000586792 ADH1AP07327 375 aa9.54□□□□□ -0.88
ZNF540-204ENST00000586792 PTK2Q05397 1052 aa9.54□□□□□ -0.88
ZNF540-204ENST00000586792 NEDD1Q8NHV4 660 aa9.54□□□□□ -0.88
ZNF540-204ENST00000586792 BCRP11274 1271 aa9.53□□□□□ -0.88
ZNF540-204ENST00000586792 CLK2P49760 499 aaKnown RBP9.53□□□□□ -0.88
ZNF540-204ENST00000586792 GPSM3Q9Y4H4 160 aa9.53□□□□□ -0.88
ZNF540-204ENST00000586792 PTGIRP43119 386 aa9.52□□□□□ -0.89
ZNF540-204ENST00000586792 CTDSPL2Q05D32 466 aa9.52□□□□□ -0.89
ZNF540-204ENST00000586792 FOXD4L5Q5VV16 416 aaPredicted RBP9.52□□□□□ -0.89
ZNF540-204ENST00000586792 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
ZNF540-204ENST00000586792 LRRC4BQ9NT99 713 aa9.52□□□□□ -0.89
ZNF540-204ENST00000586792 IGF1RP08069 1367 aa9.51□□□□□ -0.89
ZNF540-204ENST00000586792 TRIM22Q8IYM9 498 aa9.51□□□□□ -0.89
ZNF540-204ENST00000586792 CUEDC1Q9NWM3 386 aaPredicted RBP9.51□□□□□ -0.89
ZNF540-204ENST00000586792 ZNF784Q8NCA9 323 aaPredicted RBP9.5□□□□□ -0.89
ZNF540-204ENST00000586792 TMPRSS4Q9NRS4 437 aa9.5□□□□□ -0.89
ZNF540-204ENST00000586792 PROCP04070 461 aa9.49□□□□□ -0.89
ZNF540-204ENST00000586792 ZNF837Q96EG3 531 aaPredicted RBP9.49□□□□□ -0.89
ZNF540-204ENST00000586792 NSFL1CQ9UNZ2 370 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms