RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 CPDO75976 1380 aa29.99■■■□□ 2.39
LAMA3-204ENST00000585600 IL13P35225 146 aa29.99■■■□□ 2.39
LAMA3-204ENST00000585600 RTL1A6NKG5 1358 aa29.98■■■□□ 2.39
LAMA3-204ENST00000585600 KIAA0232Q92628 1395 aa29.98■■■□□ 2.39
LAMA3-204ENST00000585600 COL22A1Q8NFW1 1626 aaPredicted RBP29.98■■■□□ 2.39
LAMA3-204ENST00000585600 HAP1P54257 671 aaPredicted RBP29.98■■■□□ 2.39
LAMA3-204ENST00000585600 ADAMTS8Q9UP79 889 aa29.98■■■□□ 2.39
LAMA3-204ENST00000585600 AXIN2Q9Y2T1 843 aa29.97■■■□□ 2.39
LAMA3-204ENST00000585600 EIF4A2Q14240 407 aaKnown RBP29.96■■■□□ 2.39
LAMA3-204ENST00000585600 ZBED9Q6R2W3 1325 aa29.96■■■□□ 2.39
LAMA3-204ENST00000585600 WDR43Q15061 677 aaKnown RBP eCLIP29.95■■■□□ 2.39
LAMA3-204ENST00000585600 CHRNA2Q15822 529 aa29.95■■■□□ 2.39
LAMA3-204ENST00000585600 JCADQ9P266 1359 aa29.94■■■□□ 2.38
LAMA3-204ENST00000585600 ABCA3Q99758 1704 aa29.93■■■□□ 2.38
LAMA3-204ENST00000585600 NUDCQ9Y266 331 aa29.93■■■□□ 2.38
LAMA3-204ENST00000585600 LTN1O94822 1766 aa29.93■■■□□ 2.38
LAMA3-204ENST00000585600 SHPRHQ149N8 1683 aa29.93■■■□□ 2.38
LAMA3-204ENST00000585600 PRDM11Q9NQV5 511 aa29.92■■■□□ 2.38
LAMA3-204ENST00000585600 U2SURPO15042 1029 aaKnown RBP29.91■■■□□ 2.38
LAMA3-204ENST00000585600 FAM83GA6ND36 823 aa29.89■■■□□ 2.38
LAMA3-204ENST00000585600 U2AF1L5P0DN76 240 aaPredicted RBP29.89■■■□□ 2.38
LAMA3-204ENST00000585600 U2AF1Q01081 240 aaKnown RBP eCLIP29.89■■■□□ 2.38
LAMA3-204ENST00000585600 LTV1Q96GA3 475 aaPredicted RBP29.89■■■□□ 2.38
LAMA3-204ENST00000585600 BLMP54132 1417 aaPredicted RBP29.87■■■□□ 2.37
LAMA3-204ENST00000585600 NUTM2BA6NNL0 878 aaPredicted RBP29.87■■■□□ 2.37
LAMA3-204ENST00000585600 NUTM2EB1AL46 878 aaPredicted RBP29.87■■■□□ 2.37
LAMA3-204ENST00000585600 NUTM2AQ8IVF1 878 aaPredicted RBP29.87■■■□□ 2.37
LAMA3-204ENST00000585600 COL18A1P39060 1754 aa29.86■■■□□ 2.37
LAMA3-204ENST00000585600 ANKRD24Q8TF21 1146 aa29.85■■■□□ 2.37
LAMA3-204ENST00000585600 EYA1Q99502 592 aa29.85■■■□□ 2.37
LAMA3-204ENST00000585600 ADAMTS2O95450 1211 aa29.83■■■□□ 2.37
LAMA3-204ENST00000585600 ABCC6O95255 1503 aa29.82■■■□□ 2.36
LAMA3-204ENST00000585600 ERBB3P21860 1342 aa29.82■■■□□ 2.36
LAMA3-204ENST00000585600 HMOX1P09601 288 aa29.81■■■□□ 2.36
LAMA3-204ENST00000585600 SPATA31A6Q5VVP1 1343 aa29.81■■■□□ 2.36
LAMA3-204ENST00000585600 CAMTA1Q9Y6Y1 1673 aa29.81■■■□□ 2.36
LAMA3-204ENST00000585600 ERICH6BQ5W0A0 696 aa29.8■■■□□ 2.36
LAMA3-204ENST00000585600 CCDC146Q8IYE0 955 aa29.8■■■□□ 2.36
LAMA3-204ENST00000585600 IGSF1Q8N6C5 1336 aa29.8■■■□□ 2.36
LAMA3-204ENST00000585600 NBPF6Q5VWK0 638 aa29.8■■■□□ 2.36
LAMA3-204ENST00000585600 NBPF4Q96M43 638 aa29.8■■■□□ 2.36
LAMA3-204ENST00000585600 LMO7Q8WWI1 1683 aa29.79■■■□□ 2.36
LAMA3-204ENST00000585600 AEBP1Q8IUX7 1158 aa29.79■■■□□ 2.36
LAMA3-204ENST00000585600 FBXO41Q8TF61 875 aa29.79■■■□□ 2.36
LAMA3-204ENST00000585600 RSPH6AQ9H0K4 717 aa29.79■■■□□ 2.36
LAMA3-204ENST00000585600 SULT6B1Q6IMI4 303 aa29.78■■■□□ 2.36
LAMA3-204ENST00000585600 FCHSD2O94868 740 aa29.78■■■□□ 2.36
LAMA3-204ENST00000585600 PLEKHF1Q96S99 279 aa29.78■■■□□ 2.36
LAMA3-204ENST00000585600 RGPD1P0DJD0 1748 aa29.76■■■□□ 2.36
LAMA3-204ENST00000585600 SENP3-EIF4A1A0A087X0R7 540 aa29.76■■■□□ 2.35
LAMA3-204ENST00000585600 BTG4Q9NY30 223 aa29.75■■■□□ 2.35
LAMA3-204ENST00000585600 LRP6O75581 1613 aa29.74■■■□□ 2.35
LAMA3-204ENST00000585600 COL5A2P05997 1499 aaPredicted RBP29.74■■■□□ 2.35
LAMA3-204ENST00000585600 USHBP1Q8N6Y0 703 aa29.74■■■□□ 2.35
LAMA3-204ENST00000585600 RGPD5Q99666 1765 aa29.74■■■□□ 2.35
LAMA3-204ENST00000585600 RUNDC1Q96C34 613 aa29.73■■■□□ 2.35
LAMA3-204ENST00000585600 KDRP35968 1356 aa29.73■■■□□ 2.35
LAMA3-204ENST00000585600 PRKAR2BP31323 418 aa29.73■■■□□ 2.35
LAMA3-204ENST00000585600 CSB-PGBD3P0DP91 1061 aa29.72■■■□□ 2.35
LAMA3-204ENST00000585600 WDR17Q8IZU2 1322 aa29.71■■■□□ 2.35
LAMA3-204ENST00000585600 COL14A1Q05707 1796 aaKnown RBP29.7■■■□□ 2.35
LAMA3-204ENST00000585600 STRN4Q9NRL3 753 aa29.7■■■□□ 2.34
LAMA3-204ENST00000585600 APAF1O14727 1248 aa29.69■■■□□ 2.34
LAMA3-204ENST00000585600 NLRP2Q9NX02 1062 aa29.69■■■□□ 2.34
LAMA3-204ENST00000585600 NCAPD2Q15021 1401 aa29.69■■■□□ 2.34
LAMA3-204ENST00000585600 EVA1CP58658 441 aa29.68■■■□□ 2.34
LAMA3-204ENST00000585600 PHACTR3Q96KR7 559 aa29.68■■■□□ 2.34
LAMA3-204ENST00000585600 PNNQ9H307 717 aaKnown RBP29.68■■■□□ 2.34
LAMA3-204ENST00000585600 LARP1Q6PKG0 1096 aaKnown RBP29.68■■■□□ 2.34
LAMA3-204ENST00000585600 C8orf37Q96NL8 207 aa29.66■■■□□ 2.34
LAMA3-204ENST00000585600 TCP11L2Q8N4U5 519 aa29.66■■■□□ 2.34
LAMA3-204ENST00000585600 SLIT2O94813 1529 aa29.65■■■□□ 2.34
LAMA3-204ENST00000585600 TOM1L2Q6ZVM7 507 aa29.65■■■□□ 2.34
LAMA3-204ENST00000585600 TSHZ2Q9NRE2 1034 aa29.64■■■□□ 2.34
LAMA3-204ENST00000585600 NGLY1Q96IV0 654 aa29.64■■■□□ 2.33
LAMA3-204ENST00000585600 RGPD2P0DJD1 1756 aa29.63■■■□□ 2.33
LAMA3-204ENST00000585600 SALL2Q9Y467 1007 aaPredicted RBP29.63■■■□□ 2.33
LAMA3-204ENST00000585600 MAPK8IP3Q9UPT6 1336 aa29.62■■■□□ 2.33
LAMA3-204ENST00000585600 FNBP4Q8N3X1 1017 aaPredicted RBP29.61■■■□□ 2.33
LAMA3-204ENST00000585600 CARD10Q9BWT7 1032 aa29.61■■■□□ 2.33
LAMA3-204ENST00000585600 RRP7AQ9Y3A4 280 aaKnown RBP29.61■■■□□ 2.33
LAMA3-204ENST00000585600 PLCH1Q4KWH8 1693 aa29.59■■■□□ 2.33
LAMA3-204ENST00000585600 TMPOP42166 694 aaKnown RBP29.59■■■□□ 2.33
LAMA3-204ENST00000585600 CRB1P82279 1406 aa29.59■■■□□ 2.33
LAMA3-204ENST00000585600 MEX3CQ5U5Q3 659 aaKnown RBP29.58■■■□□ 2.33
LAMA3-204ENST00000585600 NEFMP07197 916 aa29.57■■■□□ 2.32
LAMA3-204ENST00000585600 NEUROD2Q15784 382 aa29.57■■■□□ 2.32
LAMA3-204ENST00000585600 BCL9LQ86UU0 1499 aa29.57■■■□□ 2.32
LAMA3-204ENST00000585600 FAM208AQ9UK61 1670 aaKnown RBP29.57■■■□□ 2.32
LAMA3-204ENST00000585600 UNC5CLQ8IV45 518 aa29.57■■■□□ 2.32
LAMA3-204ENST00000585600 MTHFSDQ2M296 383 aaKnown RBP29.55■■■□□ 2.32
LAMA3-204ENST00000585600 NFE2L2Q16236 605 aa29.55■■■□□ 2.32
LAMA3-204ENST00000585600 USP35Q9P2H5 1018 aa29.55■■■□□ 2.32
LAMA3-204ENST00000585600 NRAPQ86VF7 1730 aa29.54■■■□□ 2.32
LAMA3-204ENST00000585600 RIPK4P57078 832 aa29.52■■■□□ 2.32
LAMA3-204ENST00000585600 RAPGEF4Q8WZA2 1011 aa29.52■■■□□ 2.32
LAMA3-204ENST00000585600 PPP4R2Q9NY27 417 aa29.52■■■□□ 2.32
LAMA3-204ENST00000585600 MEGF6O75095 1541 aa29.52■■■□□ 2.32
LAMA3-204ENST00000585600 PHF23Q9BUL5 403 aaPredicted RBP29.52■■■□□ 2.32
LAMA3-204ENST00000585600 USP21Q9UK80 565 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms