RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CRB1P82279 1406 aa19.02■□□□□ 0.64
PRKCSH-202ENST00000585540 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.64
PRKCSH-202ENST00000585540 ANKRD26Q9UPS8 1709 aa19.02■□□□□ 0.63
PRKCSH-202ENST00000585540 FAM208AQ9UK61 1670 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-202ENST00000585540 KIF7Q2M1P5 1343 aa19.01■□□□□ 0.63
PRKCSH-202ENST00000585540 SPATA31A1Q5TZJ5 1347 aa19.01■□□□□ 0.63
PRKCSH-202ENST00000585540 WDR17Q8IZU2 1322 aa19■□□□□ 0.63
PRKCSH-202ENST00000585540 BARGINQ6ZT62 677 aa19■□□□□ 0.63
PRKCSH-202ENST00000585540 THSD7AQ9UPZ6 1657 aa19■□□□□ 0.63
PRKCSH-202ENST00000585540 CARD14Q9BXL6 1004 aa18.99■□□□□ 0.63
PRKCSH-202ENST00000585540 CCDC7Q96M83 1385 aa18.98■□□□□ 0.63
PRKCSH-202ENST00000585540 STRN4Q9NRL3 753 aa18.98■□□□□ 0.63
PRKCSH-202ENST00000585540 ZRANB1Q9UGI0 708 aa18.98■□□□□ 0.63
PRKCSH-202ENST00000585540 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
PRKCSH-202ENST00000585540 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
PRKCSH-202ENST00000585540 CDCA7Q9BWT1 371 aaPredicted RBP18.97■□□□□ 0.63
PRKCSH-202ENST00000585540 GGNBP2Q9H3C7 697 aa18.97■□□□□ 0.63
PRKCSH-202ENST00000585540 PANK3Q9H999 370 aa18.97■□□□□ 0.63
PRKCSH-202ENST00000585540 ERBB3P21860 1342 aa18.97■□□□□ 0.63
PRKCSH-202ENST00000585540 ZBTB7CA1YPR0 619 aa18.96■□□□□ 0.63
PRKCSH-202ENST00000585540 SOX12O15370 315 aa18.96■□□□□ 0.63
PRKCSH-202ENST00000585540 LARP1Q6PKG0 1096 aaKnown RBP18.95■□□□□ 0.62
PRKCSH-202ENST00000585540 SEPT12Q8IYM1 358 aa18.95■□□□□ 0.62
PRKCSH-202ENST00000585540 IP6K1Q92551 441 aa18.95■□□□□ 0.62
PRKCSH-202ENST00000585540 KNSTRNQ9Y448 316 aa18.95■□□□□ 0.62
PRKCSH-202ENST00000585540 PARP4Q9UKK3 1724 aaKnown RBP18.94■□□□□ 0.62
PRKCSH-202ENST00000585540 TOM1L2Q6ZVM7 507 aa18.94■□□□□ 0.62
PRKCSH-202ENST00000585540 CARD10Q9BWT7 1032 aa18.94■□□□□ 0.62
PRKCSH-202ENST00000585540 WNK3Q9BYP7 1800 aa18.94■□□□□ 0.62
PRKCSH-202ENST00000585540 FLT4P35916 1363 aa18.93■□□□□ 0.62
PRKCSH-202ENST00000585540 RGPD5Q99666 1765 aa18.93■□□□□ 0.62
PRKCSH-202ENST00000585540 SMG6Q86US8 1419 aaKnown RBP18.93■□□□□ 0.62
PRKCSH-202ENST00000585540 CSB-PGBD3P0DP91 1061 aa18.93■□□□□ 0.62
PRKCSH-202ENST00000585540 FAM98CQ17RN3 349 aaKnown RBP18.93■□□□□ 0.62
PRKCSH-202ENST00000585540 AXIN2Q9Y2T1 843 aa18.93■□□□□ 0.62
PRKCSH-202ENST00000585540 MAP3K19Q56UN5 1328 aa18.93■□□□□ 0.62
PRKCSH-202ENST00000585540 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
PRKCSH-202ENST00000585540 AMPHP49418 695 aa18.92■□□□□ 0.62
PRKCSH-202ENST00000585540 CCDC125Q86Z20 511 aa18.92■□□□□ 0.62
PRKCSH-202ENST00000585540 BRWD3Q6RI45 1802 aa18.92■□□□□ 0.62
PRKCSH-202ENST00000585540 WASHC2AQ641Q2 1341 aa18.92■□□□□ 0.62
PRKCSH-202ENST00000585540 A0A0G2JS52 829 aa18.9■□□□□ 0.62
PRKCSH-202ENST00000585540 HOXC9P31274 260 aa18.9■□□□□ 0.62
PRKCSH-202ENST00000585540 MYT1Q01538 1121 aa18.9■□□□□ 0.62
PRKCSH-202ENST00000585540 KRT27Q7Z3Y8 459 aa18.9■□□□□ 0.62
PRKCSH-202ENST00000585540 INSRP06213 1382 aa18.9■□□□□ 0.62
PRKCSH-202ENST00000585540 ANKRD24Q8TF21 1146 aa18.88■□□□□ 0.61
PRKCSH-202ENST00000585540 DISP2A7MBM2 1401 aa18.87■□□□□ 0.61
PRKCSH-202ENST00000585540 UPF1Q92900 1129 aaKnown RBP eCLIP18.86■□□□□ 0.61
PRKCSH-202ENST00000585540 USP35Q9P2H5 1018 aa18.86■□□□□ 0.61
PRKCSH-202ENST00000585540 MAP2P11137 1827 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-202ENST00000585540 LRRC37A3O60309 1634 aa18.85■□□□□ 0.61
PRKCSH-202ENST00000585540 PER1O15534 1290 aaPredicted RBP18.85■□□□□ 0.61
PRKCSH-202ENST00000585540 RRS1Q15050 365 aaKnown RBP18.85■□□□□ 0.61
PRKCSH-202ENST00000585540 AMER1Q5JTC6 1135 aaPredicted RBP18.85■□□□□ 0.61
PRKCSH-202ENST00000585540 PLEKHG2Q9H7P9 1386 aa18.84■□□□□ 0.61
PRKCSH-202ENST00000585540 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
PRKCSH-202ENST00000585540 TNS2Q63HR2 1409 aa18.83■□□□□ 0.61
PRKCSH-202ENST00000585540 PEAK1Q9H792 1746 aa18.83■□□□□ 0.61
PRKCSH-202ENST00000585540 DDB1Q16531 1140 aa18.83■□□□□ 0.6
PRKCSH-202ENST00000585540 MORC1Q86VD1 984 aa18.83■□□□□ 0.6
PRKCSH-202ENST00000585540 NLRP2Q9NX02 1062 aa18.83■□□□□ 0.6
PRKCSH-202ENST00000585540 BCL9O00512 1426 aa18.83■□□□□ 0.6
PRKCSH-202ENST00000585540 OVOS2A0A0G2JMS6 1433 aa18.82■□□□□ 0.6
PRKCSH-202ENST00000585540 RGPD1P0DJD0 1748 aa18.81■□□□□ 0.6
PRKCSH-202ENST00000585540 IL2RBP14784 551 aa18.81■□□□□ 0.6
PRKCSH-202ENST00000585540 FAM196AQ6ZSG2 479 aa18.81■□□□□ 0.6
PRKCSH-202ENST00000585540 POLKQ9UBT6 870 aa18.81■□□□□ 0.6
PRKCSH-202ENST00000585540 SF3B2Q13435 895 aaKnown RBP18.79■□□□□ 0.6
PRKCSH-202ENST00000585540 EMILIN1Q9Y6C2 1016 aa18.79■□□□□ 0.6
PRKCSH-202ENST00000585540 NCAPD2Q15021 1401 aa18.79■□□□□ 0.6
PRKCSH-202ENST00000585540 EXOC5O00471 708 aa18.78■□□□□ 0.6
PRKCSH-202ENST00000585540 HSP90AB2PQ58FF8 381 aa18.77■□□□□ 0.6
PRKCSH-202ENST00000585540 FBLN1P23142 703 aa18.76■□□□□ 0.59
PRKCSH-202ENST00000585540 LTV1Q96GA3 475 aaPredicted RBP18.76■□□□□ 0.59
PRKCSH-202ENST00000585540 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
PRKCSH-202ENST00000585540 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
PRKCSH-202ENST00000585540 RGPD2P0DJD1 1756 aa18.73■□□□□ 0.59
PRKCSH-202ENST00000585540 PARD3Q8TEW0 1356 aa18.72■□□□□ 0.59
PRKCSH-202ENST00000585540 TNNT2P45379 298 aaPredicted RBP18.72■□□□□ 0.59
PRKCSH-202ENST00000585540 BAG6P46379 1132 aa18.72■□□□□ 0.59
PRKCSH-202ENST00000585540 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
PRKCSH-202ENST00000585540 NBPF6Q5VWK0 638 aa18.71■□□□□ 0.59
PRKCSH-202ENST00000585540 NBPF4Q96M43 638 aa18.71■□□□□ 0.59
PRKCSH-202ENST00000585540 TATP17735 454 aaPredicted RBP18.7■□□□□ 0.58
PRKCSH-202ENST00000585540 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
PRKCSH-202ENST00000585540 RGPD3A6NKT7 1758 aaPredicted RBP18.7■□□□□ 0.58
PRKCSH-202ENST00000585540 RGPD4Q7Z3J3 1758 aa18.7■□□□□ 0.58
PRKCSH-202ENST00000585540 MEGF6O75095 1541 aa18.69■□□□□ 0.58
PRKCSH-202ENST00000585540 SBF2Q86WG5 1849 aa18.69■□□□□ 0.58
PRKCSH-202ENST00000585540 IGSF1Q8N6C5 1336 aa18.69■□□□□ 0.58
PRKCSH-202ENST00000585540 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
PRKCSH-202ENST00000585540 EIF4A2Q14240 407 aaKnown RBP18.68■□□□□ 0.58
PRKCSH-202ENST00000585540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
PRKCSH-202ENST00000585540 MARCH10Q8NA82 808 aaPredicted RBP18.67■□□□□ 0.58
PRKCSH-202ENST00000585540 ZCRB1Q8TBF4 217 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-202ENST00000585540 EYA1Q99502 592 aa18.67■□□□□ 0.58
PRKCSH-202ENST00000585540 PCDH11XQ9BZA7 1347 aa18.67■□□□□ 0.58
PRKCSH-202ENST00000585540 PCDH11YQ9BZA8 1340 aa18.67■□□□□ 0.58
PRKCSH-202ENST00000585540 NHSQ6T4R5 1651 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms