RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.1■■■□□ 2.73
LSM7-202ENST00000585395 RREB1Q92766 1687 aa32.1■■■□□ 2.73
LSM7-202ENST00000585395 EVA1CP58658 441 aa32.09■■■□□ 2.73
LSM7-202ENST00000585395 NBPF14Q5TI25 921 aa32.09■■■□□ 2.73
LSM7-202ENST00000585395 SOX12O15370 315 aa32.06■■■□□ 2.72
LSM7-202ENST00000585395 BARGINQ6ZT62 677 aa32.06■■■□□ 2.72
LSM7-202ENST00000585395 NUP188Q5SRE5 1749 aa32.06■■■□□ 2.72
LSM7-202ENST00000585395 CPDO75976 1380 aa32.06■■■□□ 2.72
LSM7-202ENST00000585395 PDE3BQ13370 1112 aa32.05■■■□□ 2.72
LSM7-202ENST00000585395 SLIT3O75094 1523 aa32.05■■■□□ 2.72
LSM7-202ENST00000585395 CD163L1Q9NR16 1453 aa32.03■■■□□ 2.72
LSM7-202ENST00000585395 KCNH5Q8NCM2 988 aa32.03■■■□□ 2.72
LSM7-202ENST00000585395 A0A1W2PP64 1363 aa32.03■■■□□ 2.72
LSM7-202ENST00000585395 EDC4Q6P2E9 1401 aaKnown RBP32.01■■■□□ 2.72
LSM7-202ENST00000585395 DCAF8L1A6NGE4 600 aa32.01■■■□□ 2.71
LSM7-202ENST00000585395 SPON1Q9HCB6 807 aa32.01■■■□□ 2.71
LSM7-202ENST00000585395 USP35Q9P2H5 1018 aa32.01■■■□□ 2.71
LSM7-202ENST00000585395 PPP1R1BQ9UD71 204 aaPredicted RBP32.01■■■□□ 2.71
LSM7-202ENST00000585395 NME9Q86XW9 330 aa31.98■■■□□ 2.71
LSM7-202ENST00000585395 LMO7Q8WWI1 1683 aa31.97■■■□□ 2.71
LSM7-202ENST00000585395 CAMTA1Q9Y6Y1 1673 aa31.96■■■□□ 2.71
LSM7-202ENST00000585395 KCNQ2O43526 872 aa31.96■■■□□ 2.71
LSM7-202ENST00000585395 TCP11L2Q8N4U5 519 aa31.94■■■□□ 2.7
LSM7-202ENST00000585395 C11orf95C9JLR9 678 aaPredicted RBP31.93■■■□□ 2.7
LSM7-202ENST00000585395 POLR3GLQ9BT43 218 aa31.93■■■□□ 2.7
LSM7-202ENST00000585395 AATKQ6ZMQ8 1374 aa31.93■■■□□ 2.7
LSM7-202ENST00000585395 ANKRD36BQ8N2N9 1353 aa31.93■■■□□ 2.7
LSM7-202ENST00000585395 THRAP3Q9Y2W1 955 aaKnown RBP31.92■■■□□ 2.7
LSM7-202ENST00000585395 LARP1Q6PKG0 1096 aaKnown RBP31.91■■■□□ 2.7
LSM7-202ENST00000585395 USP31Q70CQ4 1352 aa31.91■■■□□ 2.7
LSM7-202ENST00000585395 COL5A2P05997 1499 aaPredicted RBP31.9■■■□□ 2.7
LSM7-202ENST00000585395 USP54Q70EL1 1684 aa31.89■■■□□ 2.7
LSM7-202ENST00000585395 ARHGEF25Q86VW2 580 aa31.88■■■□□ 2.69
LSM7-202ENST00000585395 NFAT5O94916 1531 aa31.86■■■□□ 2.69
LSM7-202ENST00000585395 CSB-PGBD3P0DP91 1061 aa31.86■■■□□ 2.69
LSM7-202ENST00000585395 PARP4Q9UKK3 1724 aaKnown RBP31.86■■■□□ 2.69
LSM7-202ENST00000585395 TOM1L2Q6ZVM7 507 aa31.85■■■□□ 2.69
LSM7-202ENST00000585395 COG3Q96JB2 828 aa31.85■■■□□ 2.69
LSM7-202ENST00000585395 RGPD3A6NKT7 1758 aaPredicted RBP31.84■■■□□ 2.69
LSM7-202ENST00000585395 COL18A1P39060 1754 aa31.84■■■□□ 2.69
LSM7-202ENST00000585395 RGPD4Q7Z3J3 1758 aa31.84■■■□□ 2.69
LSM7-202ENST00000585395 RGPD5Q99666 1765 aa31.84■■■□□ 2.69
LSM7-202ENST00000585395 CRB1P82279 1406 aa31.83■■■□□ 2.69
LSM7-202ENST00000585395 LTN1O94822 1766 aa31.83■■■□□ 2.69
LSM7-202ENST00000585395 MYOM1P52179 1685 aa31.81■■■□□ 2.68
LSM7-202ENST00000585395 OVOS2A0A0J9YW53 1432 aa31.81■■■□□ 2.68
LSM7-202ENST00000585395 OVOS2Q6IE36 1432 aa31.81■■■□□ 2.68
LSM7-202ENST00000585395 PLSCR1O15162 318 aa31.8■■■□□ 2.68
LSM7-202ENST00000585395 OVOS2A0A0G2JMS6 1433 aa31.8■■■□□ 2.68
LSM7-202ENST00000585395 AXIN2Q9Y2T1 843 aa31.79■■■□□ 2.68
LSM7-202ENST00000585395 KIF7Q2M1P5 1343 aa31.78■■■□□ 2.68
LSM7-202ENST00000585395 ABCC6O95255 1503 aa31.78■■■□□ 2.68
LSM7-202ENST00000585395 WDR17Q8IZU2 1322 aa31.77■■■□□ 2.68
LSM7-202ENST00000585395 PEAK1Q9H792 1746 aa31.77■■■□□ 2.68
LSM7-202ENST00000585395 KIF20BQ96Q89 1820 aa31.77■■■□□ 2.68
LSM7-202ENST00000585395 CASZ1Q86V15 1759 aa31.74■■■□□ 2.67
LSM7-202ENST00000585395 CCDC7Q96M83 1385 aa31.73■■■□□ 2.67
LSM7-202ENST00000585395 GGNBP2Q9H3C7 697 aa31.73■■■□□ 2.67
LSM7-202ENST00000585395 NSD3Q9BZ95 1437 aa31.72■■■□□ 2.67
LSM7-202ENST00000585395 SBF2Q86WG5 1849 aa31.72■■■□□ 2.67
LSM7-202ENST00000585395 BCL11BQ9C0K0 894 aaPredicted RBP31.7■■■□□ 2.67
LSM7-202ENST00000585395 ANO8Q9HCE9 1232 aaPredicted RBP31.7■■■□□ 2.67
LSM7-202ENST00000585395 FYB1O15117 783 aa31.69■■■□□ 2.66
LSM7-202ENST00000585395 AMPHP49418 695 aa31.68■■■□□ 2.66
LSM7-202ENST00000585395 DDB1Q16531 1140 aa31.68■■■□□ 2.66
LSM7-202ENST00000585395 LRRC37A3O60309 1634 aa31.67■■■□□ 2.66
LSM7-202ENST00000585395 ZNF784Q8NCA9 323 aaPredicted RBP31.67■■■□□ 2.66
LSM7-202ENST00000585395 CARD10Q9BWT7 1032 aa31.67■■■□□ 2.66
LSM7-202ENST00000585395 NLRP2Q9NX02 1062 aa31.67■■■□□ 2.66
LSM7-202ENST00000585395 WNK3Q9BYP7 1800 aa31.66■■■□□ 2.66
LSM7-202ENST00000585395 ANKRD24Q8TF21 1146 aa31.66■■■□□ 2.66
LSM7-202ENST00000585395 PANK3Q9H999 370 aa31.66■■■□□ 2.66
LSM7-202ENST00000585395 WASHC2AQ641Q2 1341 aa31.66■■■□□ 2.66
LSM7-202ENST00000585395 ERBB3P21860 1342 aa31.65■■■□□ 2.66
LSM7-202ENST00000585395 CDCA7Q9BWT1 371 aaPredicted RBP31.64■■■□□ 2.66
LSM7-202ENST00000585395 CGNL1Q0VF96 1302 aa31.64■■■□□ 2.66
LSM7-202ENST00000585395 PTGER2P43116 358 aa31.63■■■□□ 2.65
LSM7-202ENST00000585395 IP6K1Q92551 441 aa31.63■■■□□ 2.65
LSM7-202ENST00000585395 LTV1Q96GA3 475 aaPredicted RBP31.63■■■□□ 2.65
LSM7-202ENST00000585395 CARD14Q9BXL6 1004 aa31.63■■■□□ 2.65
LSM7-202ENST00000585395 PDGFDQ9GZP0 370 aaPredicted RBP31.63■■■□□ 2.65
LSM7-202ENST00000585395 BCL9O00512 1426 aa31.62■■■□□ 2.65
LSM7-202ENST00000585395 ZBTB7AO95365 584 aa31.62■■■□□ 2.65
LSM7-202ENST00000585395 MAP3K19Q56UN5 1328 aa31.62■■■□□ 2.65
LSM7-202ENST00000585395 FBLN1P23142 703 aa31.61■■■□□ 2.65
LSM7-202ENST00000585395 PROM2Q8N271 834 aa31.61■■■□□ 2.65
LSM7-202ENST00000585395 UTRNP46939 3433 aa31.59■■■□□ 2.65
LSM7-202ENST00000585395 RRS1Q15050 365 aaKnown RBP31.59■■■□□ 2.65
LSM7-202ENST00000585395 PTF1AQ7RTS3 328 aa31.59■■■□□ 2.65
LSM7-202ENST00000585395 KNSTRNQ9Y448 316 aa31.59■■■□□ 2.65
LSM7-202ENST00000585395 HOXC9P31274 260 aa31.57■■■□□ 2.64
LSM7-202ENST00000585395 FAM208AQ9UK61 1670 aaKnown RBP31.57■■■□□ 2.64
LSM7-202ENST00000585395 RTL1A6NKG5 1358 aa31.56■■■□□ 2.64
LSM7-202ENST00000585395 STK32BQ9NY57 414 aa31.56■■■□□ 2.64
LSM7-202ENST00000585395 ATF5Q9Y2D1 282 aaPredicted RBP31.56■■■□□ 2.64
LSM7-202ENST00000585395 MARCH10Q8NA82 808 aaPredicted RBP31.55■■■□□ 2.64
LSM7-202ENST00000585395 SYT17Q9BSW7 474 aa31.55■■■□□ 2.64
LSM7-202ENST00000585395 NSD2O96028 1365 aa31.55■■■□□ 2.64
LSM7-202ENST00000585395 FHDC1Q9C0D6 1143 aaPredicted RBP31.54■■■□□ 2.64
LSM7-202ENST00000585395 SMG6Q86US8 1419 aaKnown RBP31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms