RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TRIM34Q9BYJ4 488 aa8.38□□□□□ -1.07
PPP4R1-227ENST00000583988 SCARF1Q14162 830 aa8.37□□□□□ -1.07
PPP4R1-227ENST00000583988 CCDC116Q8IYX3 515 aa8.37□□□□□ -1.07
PPP4R1-227ENST00000583988 KCTD15Q96SI1 283 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-227ENST00000583988 GPSM3Q9Y4H4 160 aa8.37□□□□□ -1.07
PPP4R1-227ENST00000583988 C6orf118Q5T5N4 469 aa8.36□□□□□ -1.07
PPP4R1-227ENST00000583988 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
PPP4R1-227ENST00000583988 TREML4Q6UXN2 200 aa8.35□□□□□ -1.07
PPP4R1-227ENST00000583988 ERICH6Q7L0X2 663 aa8.35□□□□□ -1.07
PPP4R1-227ENST00000583988 EMILIN1Q9Y6C2 1016 aa8.35□□□□□ -1.07
PPP4R1-227ENST00000583988 UPP2O95045 317 aa8.34□□□□□ -1.07
PPP4R1-227ENST00000583988 RAB15P59190 212 aa8.34□□□□□ -1.07
PPP4R1-227ENST00000583988 PPP1R26Q5T8A7 1209 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-227ENST00000583988 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-227ENST00000583988 GJD4Q96KN9 370 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-227ENST00000583988 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-227ENST00000583988 WFS1O76024 890 aa8.33□□□□□ -1.08
PPP4R1-227ENST00000583988 BMP2P12643 396 aa8.33□□□□□ -1.08
PPP4R1-227ENST00000583988 BANK1Q8NDB2 785 aa8.33□□□□□ -1.08
PPP4R1-227ENST00000583988 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
PPP4R1-227ENST00000583988 MEIOBQ8N635 442 aa8.32□□□□□ -1.08
PPP4R1-227ENST00000583988 PGPEP1Q9NXJ5 209 aa8.32□□□□□ -1.08
PPP4R1-227ENST00000583988 SOBPA7XYQ1 873 aa8.31□□□□□ -1.08
PPP4R1-227ENST00000583988 TERTO14746 1132 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-227ENST00000583988 NFX1Q12986 1120 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-227ENST00000583988 CBLBQ13191 982 aa8.31□□□□□ -1.08
PPP4R1-227ENST00000583988 NBPF20Q3BBV1 942 aa8.31□□□□□ -1.08
PPP4R1-227ENST00000583988 INTS6LQ5JSJ4 861 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-227ENST00000583988 SNRKQ9NRH2 765 aa8.31□□□□□ -1.08
PPP4R1-227ENST00000583988 ZBBXA8MT70 800 aa8.3□□□□□ -1.08
PPP4R1-227ENST00000583988 DHX9Q08211 1270 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-227ENST00000583988 MTMR14Q8NCE2 650 aa8.3□□□□□ -1.08
PPP4R1-227ENST00000583988 FBXO45P0C2W1 286 aa8.29□□□□□ -1.08
PPP4R1-227ENST00000583988 VEGFBP49765 207 aa8.29□□□□□ -1.08
PPP4R1-227ENST00000583988 TSEN34Q9BSV6 310 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-227ENST00000583988 PCDHB9Q9Y5E1 797 aa8.29□□□□□ -1.08
PPP4R1-227ENST00000583988 MAN1A2O60476 641 aa8.28□□□□□ -1.08
PPP4R1-227ENST00000583988 LCE2AQ5TA79 106 aaPredicted RBP8.28□□□□□ -1.08
PPP4R1-227ENST00000583988 TMPRSS4Q9NRS4 437 aa8.28□□□□□ -1.08
PPP4R1-227ENST00000583988 NXF1Q9UBU9 619 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-227ENST00000583988 NDUFB9Q9Y6M9 179 aa8.28□□□□□ -1.08
PPP4R1-227ENST00000583988 SOCS7O14512 581 aa8.27□□□□□ -1.09
PPP4R1-227ENST00000583988 ERVH48-1M5A8F1 160 aa8.26□□□□□ -1.09
PPP4R1-227ENST00000583988 APBB1O00213 710 aa8.26□□□□□ -1.09
PPP4R1-227ENST00000583988 Q6ZVU0 165 aa8.26□□□□□ -1.09
PPP4R1-227ENST00000583988 AGBL1Q96MI9 1066 aa8.26□□□□□ -1.09
PPP4R1-227ENST00000583988 RELBQ01201 579 aa8.25□□□□□ -1.09
PPP4R1-227ENST00000583988 FLIIQ13045 1269 aa8.25□□□□□ -1.09
PPP4R1-227ENST00000583988 ZNF784Q8NCA9 323 aaPredicted RBP8.25□□□□□ -1.09
PPP4R1-227ENST00000583988 SLC16A10Q8TF71 515 aa8.25□□□□□ -1.09
PPP4R1-227ENST00000583988 GIGYF1O75420 1035 aaPredicted RBP8.24□□□□□ -1.09
PPP4R1-227ENST00000583988 NR1H3Q13133 447 aa8.24□□□□□ -1.09
PPP4R1-227ENST00000583988 SOS2Q07890 1332 aaPredicted RBP8.24□□□□□ -1.09
PPP4R1-227ENST00000583988 TTLL8A6PVC2 850 aa8.23□□□□□ -1.09
PPP4R1-227ENST00000583988 ESPNB1AK53 854 aa8.23□□□□□ -1.09
PPP4R1-227ENST00000583988 LCE2CQ5TA81 110 aa8.23□□□□□ -1.09
PPP4R1-227ENST00000583988 DNMT3LQ9UJW3 386 aa8.23□□□□□ -1.09
PPP4R1-227ENST00000583988 FIGNL2A6NMB9 653 aa8.22□□□□□ -1.09
PPP4R1-227ENST00000583988 GPR37L1O60883 481 aa8.22□□□□□ -1.09
PPP4R1-227ENST00000583988 MCM6Q14566 821 aa8.22□□□□□ -1.09
PPP4R1-227ENST00000583988 ZNF395Q9H8N7 513 aaPredicted RBP8.22□□□□□ -1.09
PPP4R1-227ENST00000583988 CYLDQ9NQC7 956 aa8.22□□□□□ -1.09
PPP4R1-227ENST00000583988 TBC1D2BQ9UPU7 963 aa8.22□□□□□ -1.09
PPP4R1-227ENST00000583988 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
PPP4R1-227ENST00000583988 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.1
PPP4R1-227ENST00000583988 H3BM21 787 aa8.2□□□□□ -1.1
PPP4R1-227ENST00000583988 SPINT1O43278 529 aa8.2□□□□□ -1.1
PPP4R1-227ENST00000583988 LILRA1O75019 489 aa8.2□□□□□ -1.1
PPP4R1-227ENST00000583988 ADD1P35611 737 aaKnown RBP8.2□□□□□ -1.1
PPP4R1-227ENST00000583988 NPAS3Q8IXF0 933 aa8.2□□□□□ -1.1
PPP4R1-227ENST00000583988 IRF7Q92985 503 aa8.2□□□□□ -1.1
PPP4R1-227ENST00000583988 INSM2Q96T92 566 aaPredicted RBP8.2□□□□□ -1.1
PPP4R1-227ENST00000583988 PRM3Q9NNZ6 103 aa8.2□□□□□ -1.1
PPP4R1-227ENST00000583988 POLMQ9NP87 494 aaPredicted RBP8.2□□□□□ -1.1
PPP4R1-227ENST00000583988 CTSOP43234 321 aaPredicted RBP8.19□□□□□ -1.1
PPP4R1-227ENST00000583988 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.19□□□□□ -1.1
PPP4R1-227ENST00000583988 ADH1AP07327 375 aa8.18□□□□□ -1.1
PPP4R1-227ENST00000583988 ERBB4Q15303 1308 aa8.18□□□□□ -1.1
PPP4R1-227ENST00000583988 GMPRP36959 345 aa8.17□□□□□ -1.1
PPP4R1-227ENST00000583988 MCCD1P59942 119 aaPredicted RBP8.17□□□□□ -1.1
PPP4R1-227ENST00000583988 RNF20Q5VTR2 975 aa8.17□□□□□ -1.1
PPP4R1-227ENST00000583988 ZNF592Q92610 1267 aa8.17□□□□□ -1.1
PPP4R1-227ENST00000583988 WIPF1O43516 503 aa8.16□□□□□ -1.1
PPP4R1-227ENST00000583988 PTGIRP43119 386 aa8.16□□□□□ -1.1
PPP4R1-227ENST00000583988 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
PPP4R1-227ENST00000583988 GDPD2Q9HCC8 539 aa8.16□□□□□ -1.1
PPP4R1-227ENST00000583988 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
PPP4R1-227ENST00000583988 PPFIA3O75145 1194 aa8.15□□□□□ -1.1
PPP4R1-227ENST00000583988 ABL2P42684 1182 aa8.15□□□□□ -1.1
PPP4R1-227ENST00000583988 PTSQ03393 145 aa8.15□□□□□ -1.1
PPP4R1-227ENST00000583988 KDF1Q8NAX2 398 aaPredicted RBP8.15□□□□□ -1.1
PPP4R1-227ENST00000583988 ATP5J2-PTCD1G3V325 749 aa8.14□□□□□ -1.11
PPP4R1-227ENST00000583988 IRF5Q13568 498 aa8.14□□□□□ -1.11
PPP4R1-227ENST00000583988 ESF1Q9H501 851 aaKnown RBP8.14□□□□□ -1.11
PPP4R1-227ENST00000583988 UBTFP17480 764 aaKnown RBP8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 SCTRP47872 440 aa8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 ERVK-9P63128 1117 aa8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 EIF4G2P78344 907 aaKnown RBP eCLIP8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 INSM1Q01101 510 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-227ENST00000583988 VAC14Q08AM6 782 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms