RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-222ENST00000583569 CFAP70Q5T0N1 1121 aa8.39□□□□□ -1.07
NUP85-222ENST00000583569 ZNF598Q86UK7 904 aaKnown RBP8.39□□□□□ -1.07
NUP85-222ENST00000583569 ARXQ96QS3 562 aa8.39□□□□□ -1.07
NUP85-222ENST00000583569 V9GY48 417 aaPredicted RBP8.39□□□□□ -1.07
NUP85-222ENST00000583569 FOXC1Q12948 553 aa8.38□□□□□ -1.07
NUP85-222ENST00000583569 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
NUP85-222ENST00000583569 MRGPRX2Q96LB1 330 aa8.38□□□□□ -1.07
NUP85-222ENST00000583569 KCTD15Q96SI1 283 aaPredicted RBP8.38□□□□□ -1.07
NUP85-222ENST00000583569 MAFBQ9Y5Q3 323 aaPredicted RBP8.38□□□□□ -1.07
NUP85-222ENST00000583569 RAB15P59190 212 aa8.37□□□□□ -1.07
NUP85-222ENST00000583569 PHTF2Q8N3S3 785 aa8.37□□□□□ -1.07
NUP85-222ENST00000583569 MAP4K5Q9Y4K4 846 aa8.37□□□□□ -1.07
NUP85-222ENST00000583569 TLL2Q9Y6L7 1015 aa8.37□□□□□ -1.07
NUP85-222ENST00000583569 USP17L5A8MUK1 530 aa8.36□□□□□ -1.07
NUP85-222ENST00000583569 PLPP7Q8NBV4 271 aa8.36□□□□□ -1.07
NUP85-222ENST00000583569 CDK15Q96Q40 435 aa8.36□□□□□ -1.07
NUP85-222ENST00000583569 ESPNB1AK53 854 aa8.35□□□□□ -1.07
NUP85-222ENST00000583569 SIAH2O43255 324 aa8.35□□□□□ -1.07
NUP85-222ENST00000583569 MAP7D1Q3KQU3 841 aa8.35□□□□□ -1.07
NUP85-222ENST00000583569 HOMEZQ8IX15 550 aa8.35□□□□□ -1.07
NUP85-222ENST00000583569 SEPT12Q8IYM1 358 aa8.35□□□□□ -1.07
NUP85-222ENST00000583569 DEPDC4Q8N2C3 294 aa8.35□□□□□ -1.07
NUP85-222ENST00000583569 PBXIP1Q96AQ6 731 aa8.35□□□□□ -1.07
NUP85-222ENST00000583569 DOLKQ9UPQ8 538 aa8.35□□□□□ -1.07
NUP85-222ENST00000583569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.34□□□□□ -1.07
NUP85-222ENST00000583569 USP17L3A6NCW0 530 aa8.34□□□□□ -1.07
NUP85-222ENST00000583569 USP17L4A6NCW7 530 aa8.34□□□□□ -1.07
NUP85-222ENST00000583569 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
NUP85-222ENST00000583569 FSHRP23945 695 aa8.34□□□□□ -1.07
NUP85-222ENST00000583569 USP17L2Q6R6M4 530 aa8.34□□□□□ -1.07
NUP85-222ENST00000583569 USP17L1Q7RTZ2 530 aa8.34□□□□□ -1.07
NUP85-222ENST00000583569 MPNDQ8N594 471 aa8.34□□□□□ -1.07
NUP85-222ENST00000583569 CCDC85AQ96PX6 553 aaPredicted RBP8.34□□□□□ -1.07
NUP85-222ENST00000583569 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
NUP85-222ENST00000583569 ADH1CP00326 375 aa8.33□□□□□ -1.08
NUP85-222ENST00000583569 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
NUP85-222ENST00000583569 INTS6LQ5JSJ4 861 aaKnown RBP8.33□□□□□ -1.08
NUP85-222ENST00000583569 CCDC125Q86Z20 511 aa8.33□□□□□ -1.08
NUP85-222ENST00000583569 PLEKHM2Q8IWE5 1019 aa8.33□□□□□ -1.08
NUP85-222ENST00000583569 PKD2L1Q9P0L9 805 aa8.33□□□□□ -1.08
NUP85-222ENST00000583569 CHIC2Q9UKJ5 165 aa8.33□□□□□ -1.08
NUP85-222ENST00000583569 PCDHB11Q9Y5F2 797 aa8.33□□□□□ -1.08
NUP85-222ENST00000583569 LZTS3O60299 673 aaPredicted RBP8.32□□□□□ -1.08
NUP85-222ENST00000583569 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
NUP85-222ENST00000583569 GRM5P41594 1212 aa8.32□□□□□ -1.08
NUP85-222ENST00000583569 NCOA4Q13772 614 aa8.32□□□□□ -1.08
NUP85-222ENST00000583569 EML3Q32P44 896 aa8.32□□□□□ -1.08
NUP85-222ENST00000583569 CDCA8Q53HL2 280 aa8.32□□□□□ -1.08
NUP85-222ENST00000583569 OXLD1Q5BKU9 147 aa8.32□□□□□ -1.08
NUP85-222ENST00000583569 VRTNQ9H8Y1 702 aa8.32□□□□□ -1.08
NUP85-222ENST00000583569 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
NUP85-222ENST00000583569 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
NUP85-222ENST00000583569 NR5A1Q13285 461 aa8.31□□□□□ -1.08
NUP85-222ENST00000583569 TRAF7Q6Q0C0 670 aa8.31□□□□□ -1.08
NUP85-222ENST00000583569 SNIP1Q8TAD8 396 aaKnown RBP8.31□□□□□ -1.08
NUP85-222ENST00000583569 WASF2Q9Y6W5 498 aa8.31□□□□□ -1.08
NUP85-222ENST00000583569 ERVH48-1M5A8F1 160 aa8.3□□□□□ -1.08
NUP85-222ENST00000583569 DHX9Q08211 1270 aaKnown RBP8.3□□□□□ -1.08
NUP85-222ENST00000583569 CYP4X1Q8N118 509 aa8.3□□□□□ -1.08
NUP85-222ENST00000583569 CDCA7Q9BWT1 371 aaPredicted RBP8.3□□□□□ -1.08
NUP85-222ENST00000583569 MKRN1Q9UHC7 482 aaKnown RBP8.3□□□□□ -1.08
NUP85-222ENST00000583569 GDF9O60383 454 aa8.29□□□□□ -1.08
NUP85-222ENST00000583569 SRPK2P78362 688 aaKnown RBP8.29□□□□□ -1.08
NUP85-222ENST00000583569 USP4Q13107 963 aa8.29□□□□□ -1.08
NUP85-222ENST00000583569 KANK4Q5T7N3 995 aaPredicted RBP8.29□□□□□ -1.08
NUP85-222ENST00000583569 CCDC116Q8IYX3 515 aa8.29□□□□□ -1.08
NUP85-222ENST00000583569 TRIM52Q96A61 297 aa8.29□□□□□ -1.08
NUP85-222ENST00000583569 ESF1Q9H501 851 aaKnown RBP8.29□□□□□ -1.08
NUP85-222ENST00000583569 NOD1Q9Y239 953 aa8.29□□□□□ -1.08
NUP85-222ENST00000583569 ATP5J2-PTCD1G3V325 749 aa8.28□□□□□ -1.08
NUP85-222ENST00000583569 RGS20O76081 388 aa8.28□□□□□ -1.08
NUP85-222ENST00000583569 MYCP01106 439 aaPredicted RBP8.28□□□□□ -1.08
NUP85-222ENST00000583569 SIRT1Q96EB6 747 aa8.28□□□□□ -1.08
NUP85-222ENST00000583569 NR3C2P08235 984 aa8.27□□□□□ -1.09
NUP85-222ENST00000583569 NNTQ13423 1086 aa8.27□□□□□ -1.09
NUP85-222ENST00000583569 PPP1R26Q5T8A7 1209 aaPredicted RBP8.27□□□□□ -1.09
NUP85-222ENST00000583569 TRIM50Q86XT4 487 aa8.27□□□□□ -1.09
NUP85-222ENST00000583569 TMPRSS4Q9NRS4 437 aa8.27□□□□□ -1.09
NUP85-222ENST00000583569 J3QL48 77 aa8.26□□□□□ -1.09
NUP85-222ENST00000583569 RASA1P20936 1047 aa8.26□□□□□ -1.09
NUP85-222ENST00000583569 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
NUP85-222ENST00000583569 CYLDQ9NQC7 956 aa8.26□□□□□ -1.09
NUP85-222ENST00000583569 ATG7O95352 703 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 ATP1A2P50993 1020 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 PRR20EP86478 221 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 PRR20CP86479 221 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 PRR20DP86480 221 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 PRR20BP86481 221 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 PRR20AP86496 221 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 TRIM67Q6ZTA4 783 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 ZNF784Q8NCA9 323 aaPredicted RBP8.25□□□□□ -1.09
NUP85-222ENST00000583569 TOR4AQ9NXH8 423 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 PGPEP1Q9NXJ5 209 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 EMILIN1Q9Y6C2 1016 aa8.25□□□□□ -1.09
NUP85-222ENST00000583569 CSB-PGBD3P0DP91 1061 aa8.24□□□□□ -1.09
NUP85-222ENST00000583569 SCTRP47872 440 aa8.24□□□□□ -1.09
NUP85-222ENST00000583569 GTF2IP78347 998 aa8.24□□□□□ -1.09
NUP85-222ENST00000583569 MYT1Q01538 1121 aa8.24□□□□□ -1.09
NUP85-222ENST00000583569 PSME1Q06323 249 aa8.24□□□□□ -1.09
NUP85-222ENST00000583569 CC2D2BQ6DHV5 1058 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms