RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 NLRP13Q86W25 1043 aa25.34■■□□□ 1.65
SNX11-212ENST00000583320 PPIP5K1Q6PFW1 1433 aa25.34■■□□□ 1.65
SNX11-212ENST00000583320 COL18A1P39060 1754 aa25.33■■□□□ 1.65
SNX11-212ENST00000583320 SLIT3O75094 1523 aa25.33■■□□□ 1.65
SNX11-212ENST00000583320 C11orf95C9JLR9 678 aaPredicted RBP25.33■■□□□ 1.65
SNX11-212ENST00000583320 DDB1Q16531 1140 aa25.32■■□□□ 1.64
SNX11-212ENST00000583320 L3MBTL2Q969R5 705 aa25.32■■□□□ 1.64
SNX11-212ENST00000583320 BCL11BQ9C0K0 894 aaPredicted RBP25.32■■□□□ 1.64
SNX11-212ENST00000583320 MARCH10Q8NA82 808 aaPredicted RBP25.31■■□□□ 1.64
SNX11-212ENST00000583320 ATF5Q9Y2D1 282 aaPredicted RBP25.31■■□□□ 1.64
SNX11-212ENST00000583320 AKAP12Q02952 1782 aa25.31■■□□□ 1.64
SNX11-212ENST00000583320 AATKQ6ZMQ8 1374 aa25.31■■□□□ 1.64
SNX11-212ENST00000583320 STAC3Q96MF2 364 aa25.29■■□□□ 1.64
SNX11-212ENST00000583320 PIK3C2AO00443 1686 aa25.28■■□□□ 1.64
SNX11-212ENST00000583320 KIAA1210Q9ULL0 1709 aa25.27■■□□□ 1.64
SNX11-212ENST00000583320 TOM1L2Q6ZVM7 507 aa25.27■■□□□ 1.64
SNX11-212ENST00000583320 FHDC1Q9C0D6 1143 aaPredicted RBP25.27■■□□□ 1.64
SNX11-212ENST00000583320 BCL9O00512 1426 aa25.27■■□□□ 1.64
SNX11-212ENST00000583320 CABP2Q9NPB3 220 aa25.26■■□□□ 1.63
SNX11-212ENST00000583320 AXIN2Q9Y2T1 843 aa25.26■■□□□ 1.63
SNX11-212ENST00000583320 USP6P35125 1406 aa25.26■■□□□ 1.63
SNX11-212ENST00000583320 SYT17Q9BSW7 474 aa25.25■■□□□ 1.63
SNX11-212ENST00000583320 WDR17Q8IZU2 1322 aa25.24■■□□□ 1.63
SNX11-212ENST00000583320 SRPK2P78362 688 aaKnown RBP25.24■■□□□ 1.63
SNX11-212ENST00000583320 TXNRD1Q16881 649 aa25.24■■□□□ 1.63
SNX11-212ENST00000583320 SGIP1Q9BQI5 828 aa25.24■■□□□ 1.63
SNX11-212ENST00000583320 RGPD5Q99666 1765 aa25.23■■□□□ 1.63
SNX11-212ENST00000583320 NLRP6P59044 892 aa25.23■■□□□ 1.63
SNX11-212ENST00000583320 NBPF1Q3BBV0 1214 aa25.23■■□□□ 1.63
SNX11-212ENST00000583320 CPSF1Q10570 1443 aaKnown RBP25.22■■□□□ 1.63
SNX11-212ENST00000583320 CHD4Q14839 1912 aa25.22■■□□□ 1.63
SNX11-212ENST00000583320 SLC15A2Q16348 729 aa25.22■■□□□ 1.63
SNX11-212ENST00000583320 STK32BQ9NY57 414 aa25.22■■□□□ 1.63
SNX11-212ENST00000583320 BRD4O60885 1362 aaPredicted RBP25.21■■□□□ 1.63
SNX11-212ENST00000583320 SENP3-EIF4A1A0A087X0R7 540 aa25.21■■□□□ 1.63
SNX11-212ENST00000583320 QRICH2Q9H0J4 1663 aa25.2■■□□□ 1.62
SNX11-212ENST00000583320 CABP1Q9NZU7 370 aa25.19■■□□□ 1.62
SNX11-212ENST00000583320 PAPPAQ13219 1627 aa25.19■■□□□ 1.62
SNX11-212ENST00000583320 CENPJQ9HC77 1338 aaPredicted RBP25.17■■□□□ 1.62
SNX11-212ENST00000583320 MTFR1LQ9H019 292 aa25.17■■□□□ 1.62
SNX11-212ENST00000583320 NHSQ6T4R5 1651 aa25.17■■□□□ 1.62
SNX11-212ENST00000583320 C1QTNF8P60827 252 aa25.16■■□□□ 1.62
SNX11-212ENST00000583320 CDCA7Q9BWT1 371 aaPredicted RBP25.15■■□□□ 1.62
SNX11-212ENST00000583320 ARHGEF25Q86VW2 580 aa25.14■■□□□ 1.62
SNX11-212ENST00000583320 CARD10Q9BWT7 1032 aa25.14■■□□□ 1.62
SNX11-212ENST00000583320 TRPM1Q7Z4N2 1603 aa25.14■■□□□ 1.61
SNX11-212ENST00000583320 TNS2Q63HR2 1409 aa25.13■■□□□ 1.61
SNX11-212ENST00000583320 NFAT5O94916 1531 aa25.12■■□□□ 1.61
SNX11-212ENST00000583320 CEP350Q5VT06 3117 aa25.12■■□□□ 1.61
SNX11-212ENST00000583320 SOX12O15370 315 aa25.11■■□□□ 1.61
SNX11-212ENST00000583320 GOLGB1Q14789 3259 aaKnown RBP25.11■■□□□ 1.61
SNX11-212ENST00000583320 CSB-PGBD3P0DP91 1061 aa25.1■■□□□ 1.61
SNX11-212ENST00000583320 ARXQ96QS3 562 aa25.1■■□□□ 1.61
SNX11-212ENST00000583320 MAP3K5Q99683 1374 aa25.09■■□□□ 1.61
SNX11-212ENST00000583320 ABCC6O95255 1503 aa25.08■■□□□ 1.61
SNX11-212ENST00000583320 EXOC5O00471 708 aa25.08■■□□□ 1.61
SNX11-212ENST00000583320 ZNF827Q17R98 1081 aa25.08■■□□□ 1.61
SNX11-212ENST00000583320 ACSBG1Q96GR2 724 aa25.08■■□□□ 1.61
SNX11-212ENST00000583320 BTAF1O14981 1849 aa25.07■■□□□ 1.6
SNX11-212ENST00000583320 ZNF316A6NFI3 1004 aaPredicted RBP25.07■■□□□ 1.6
SNX11-212ENST00000583320 TTC21BQ7Z4L5 1316 aa25.07■■□□□ 1.6
SNX11-212ENST00000583320 CCDC7Q96M83 1385 aa25.05■■□□□ 1.6
SNX11-212ENST00000583320 KCNH5Q8NCM2 988 aa25.03■■□□□ 1.6
SNX11-212ENST00000583320 LRRC4BQ9NT99 713 aa25.02■■□□□ 1.6
SNX11-212ENST00000583320 SHANK3Q9BYB0 1731 aa25.01■■□□□ 1.59
SNX11-212ENST00000583320 COL24A1Q17RW2 1714 aa25■■□□□ 1.59
SNX11-212ENST00000583320 GPR162Q16538 588 aa24.99■■□□□ 1.59
SNX11-212ENST00000583320 TUBGCP6Q96RT7 1819 aa24.98■■□□□ 1.59
SNX11-212ENST00000583320 IFFO2Q5TF58 517 aa24.98■■□□□ 1.59
SNX11-212ENST00000583320 GIGYF1O75420 1035 aaPredicted RBP24.97■■□□□ 1.59
SNX11-212ENST00000583320 QSER1Q2KHR3 1735 aa24.97■■□□□ 1.59
SNX11-212ENST00000583320 ERBB3P21860 1342 aa24.96■■□□□ 1.59
SNX11-212ENST00000583320 EVC2Q86UK5 1308 aa24.96■■□□□ 1.59
SNX11-212ENST00000583320 TTC21AQ8NDW8 1320 aa24.96■■□□□ 1.59
SNX11-212ENST00000583320 KLHL34Q8N239 644 aa24.96■■□□□ 1.59
SNX11-212ENST00000583320 MON2Q7Z3U7 1717 aa24.95■■□□□ 1.59
SNX11-212ENST00000583320 AKT1S1Q96B36 256 aa24.95■■□□□ 1.58
SNX11-212ENST00000583320 USP54Q70EL1 1684 aa24.94■■□□□ 1.58
SNX11-212ENST00000583320 LTN1O94822 1766 aa24.93■■□□□ 1.58
SNX11-212ENST00000583320 PELP1Q8IZL8 1130 aaKnown RBP24.93■■□□□ 1.58
SNX11-212ENST00000583320 NLGN2Q8NFZ4 835 aa24.93■■□□□ 1.58
SNX11-212ENST00000583320 ZNF692Q9BU19 519 aaPredicted RBP24.93■■□□□ 1.58
SNX11-212ENST00000583320 NLRP2Q9NX02 1062 aa24.93■■□□□ 1.58
SNX11-212ENST00000583320 PNPLA7Q6ZV29 1317 aa24.92■■□□□ 1.58
SNX11-212ENST00000583320 KAT6BQ8WYB5 2073 aa24.92■■□□□ 1.58
SNX11-212ENST00000583320 IL2RBP14784 551 aa24.92■■□□□ 1.58
SNX11-212ENST00000583320 EIF4G2P78344 907 aaKnown RBP eCLIP24.92■■□□□ 1.58
SNX11-212ENST00000583320 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
SNX11-212ENST00000583320 ROCK2O75116 1388 aaKnown RBP24.9■■□□□ 1.58
SNX11-212ENST00000583320 KCNQ4P56696 695 aa24.89■■□□□ 1.58
SNX11-212ENST00000583320 USP31Q70CQ4 1352 aa24.88■■□□□ 1.57
SNX11-212ENST00000583320 SLC16A10Q8TF71 515 aa24.87■■□□□ 1.57
SNX11-212ENST00000583320 CD163L1Q9NR16 1453 aa24.86■■□□□ 1.57
SNX11-212ENST00000583320 YBX3P16989 372 aaKnown RBP eCLIP24.86■■□□□ 1.57
SNX11-212ENST00000583320 POLD1P28340 1107 aa24.86■■□□□ 1.57
SNX11-212ENST00000583320 NME9Q86XW9 330 aa24.86■■□□□ 1.57
SNX11-212ENST00000583320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.86■■□□□ 1.57
SNX11-212ENST00000583320 ANKRD24Q8TF21 1146 aa24.86■■□□□ 1.57
SNX11-212ENST00000583320 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
SNX11-212ENST00000583320 HSPA5P11021 654 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms