RNA–Protein interactions for RNA: ENST00000583117.1

LINC00200-202, long intergenic non-protein coding RNA 200, humanhuman

TSL 3

Gene LINC00200, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00200-202ENST00000583117 GLI3P10071 1580 aa24.8■■□□□ 1.56
LINC00200-202ENST00000583117 LTN1O94822 1766 aa24.8■■□□□ 1.56
LINC00200-202ENST00000583117 COL5A2P05997 1499 aaPredicted RBP24.8■■□□□ 1.56
LINC00200-202ENST00000583117 SPATA31A5Q5VU36 1347 aa24.79■■□□□ 1.56
LINC00200-202ENST00000583117 SPATA31A7Q8IWB4 1347 aa24.79■■□□□ 1.56
LINC00200-202ENST00000583117 RGS12O14924 1447 aa24.78■■□□□ 1.56
LINC00200-202ENST00000583117 KNSTRNQ9Y448 316 aa24.78■■□□□ 1.56
LINC00200-202ENST00000583117 NSD2O96028 1365 aa24.78■■□□□ 1.56
LINC00200-202ENST00000583117 AXIN2Q9Y2T1 843 aa24.76■■□□□ 1.55
LINC00200-202ENST00000583117 SPATA31A1Q5TZJ5 1347 aa24.75■■□□□ 1.55
LINC00200-202ENST00000583117 ANKRD26Q9UPS8 1709 aa24.75■■□□□ 1.55
LINC00200-202ENST00000583117 ONECUT3O60422 494 aaPredicted RBP24.74■■□□□ 1.55
LINC00200-202ENST00000583117 LARP1Q6PKG0 1096 aaKnown RBP24.74■■□□□ 1.55
LINC00200-202ENST00000583117 RGPD5Q99666 1765 aa24.73■■□□□ 1.55
LINC00200-202ENST00000583117 BLMP54132 1417 aaPredicted RBP24.73■■□□□ 1.55
LINC00200-202ENST00000583117 CRB1P82279 1406 aa24.73■■□□□ 1.55
LINC00200-202ENST00000583117 WDR17Q8IZU2 1322 aa24.73■■□□□ 1.55
LINC00200-202ENST00000583117 RTL1A6NKG5 1358 aa24.72■■□□□ 1.55
LINC00200-202ENST00000583117 MAP3K19Q56UN5 1328 aa24.72■■□□□ 1.55
LINC00200-202ENST00000583117 IP6K1Q92551 441 aa24.72■■□□□ 1.55
LINC00200-202ENST00000583117 THRAP3Q9Y2W1 955 aaKnown RBP24.72■■□□□ 1.55
LINC00200-202ENST00000583117 AMPHP49418 695 aa24.71■■□□□ 1.55
LINC00200-202ENST00000583117 KIF24Q5T7B8 1368 aa24.7■■□□□ 1.55
LINC00200-202ENST00000583117 CSB-PGBD3P0DP91 1061 aa24.7■■□□□ 1.54
LINC00200-202ENST00000583117 FAM98CQ17RN3 349 aaKnown RBP24.7■■□□□ 1.54
LINC00200-202ENST00000583117 TOM1L2Q6ZVM7 507 aa24.7■■□□□ 1.54
LINC00200-202ENST00000583117 BARGINQ6ZT62 677 aa24.69■■□□□ 1.54
LINC00200-202ENST00000583117 SEPT12Q8IYM1 358 aa24.69■■□□□ 1.54
LINC00200-202ENST00000583117 TCP11L2Q8N4U5 519 aa24.69■■□□□ 1.54
LINC00200-202ENST00000583117 ERBB3P21860 1342 aa24.68■■□□□ 1.54
LINC00200-202ENST00000583117 PER1O15534 1290 aaPredicted RBP24.68■■□□□ 1.54
LINC00200-202ENST00000583117 FBLN1P23142 703 aa24.68■■□□□ 1.54
LINC00200-202ENST00000583117 RRS1Q15050 365 aaKnown RBP24.68■■□□□ 1.54
LINC00200-202ENST00000583117 USP35Q9P2H5 1018 aa24.68■■□□□ 1.54
LINC00200-202ENST00000583117 A0A0G2JS52 829 aa24.67■■□□□ 1.54
LINC00200-202ENST00000583117 HOXC9P31274 260 aa24.67■■□□□ 1.54
LINC00200-202ENST00000583117 MYT1Q01538 1121 aa24.67■■□□□ 1.54
LINC00200-202ENST00000583117 AMER1Q5JTC6 1135 aaPredicted RBP24.66■■□□□ 1.54
LINC00200-202ENST00000583117 CARD10Q9BWT7 1032 aa24.66■■□□□ 1.54
LINC00200-202ENST00000583117 MORC1Q86VD1 984 aa24.65■■□□□ 1.54
LINC00200-202ENST00000583117 ANKRD24Q8TF21 1146 aa24.65■■□□□ 1.54
LINC00200-202ENST00000583117 THSD7AQ9UPZ6 1657 aa24.65■■□□□ 1.54
LINC00200-202ENST00000583117 FLT4P35916 1363 aa24.65■■□□□ 1.54
LINC00200-202ENST00000583117 FAM208AQ9UK61 1670 aaKnown RBP24.63■■□□□ 1.53
LINC00200-202ENST00000583117 NPC1L1Q9UHC9 1359 aa24.63■■□□□ 1.53
LINC00200-202ENST00000583117 MAP2P11137 1827 aaKnown RBP24.62■■□□□ 1.53
LINC00200-202ENST00000583117 CDCA7Q9BWT1 371 aaPredicted RBP24.61■■□□□ 1.53
LINC00200-202ENST00000583117 NLRP2Q9NX02 1062 aa24.61■■□□□ 1.53
LINC00200-202ENST00000583117 INSRP06213 1382 aa24.61■■□□□ 1.53
LINC00200-202ENST00000583117 BRWD3Q6RI45 1802 aa24.61■■□□□ 1.53
LINC00200-202ENST00000583117 SMG6Q86US8 1419 aaKnown RBP24.61■■□□□ 1.53
LINC00200-202ENST00000583117 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
LINC00200-202ENST00000583117 KRT27Q7Z3Y8 459 aa24.6■■□□□ 1.53
LINC00200-202ENST00000583117 EMILIN1Q9Y6C2 1016 aa24.6■■□□□ 1.53
LINC00200-202ENST00000583117 PEAK1Q9H792 1746 aa24.59■■□□□ 1.53
LINC00200-202ENST00000583117 POLKQ9UBT6 870 aa24.59■■□□□ 1.53
LINC00200-202ENST00000583117 LTV1Q96GA3 475 aaPredicted RBP24.58■■□□□ 1.53
LINC00200-202ENST00000583117 PPM1GO15355 546 aaPredicted RBP24.57■■□□□ 1.52
LINC00200-202ENST00000583117 PARP4Q9UKK3 1724 aaKnown RBP24.57■■□□□ 1.52
LINC00200-202ENST00000583117 WNK3Q9BYP7 1800 aa24.56■■□□□ 1.52
LINC00200-202ENST00000583117 HSP90AB2PQ58FF8 381 aa24.56■■□□□ 1.52
LINC00200-202ENST00000583117 CC2D1BQ5T0F9 858 aaKnown RBP24.56■■□□□ 1.52
LINC00200-202ENST00000583117 PDE3BQ13370 1112 aa24.53■■□□□ 1.52
LINC00200-202ENST00000583117 DISP2A7MBM2 1401 aa24.52■■□□□ 1.52
LINC00200-202ENST00000583117 DDB1Q16531 1140 aa24.51■■□□□ 1.51
LINC00200-202ENST00000583117 IL2RBP14784 551 aa24.5■■□□□ 1.51
LINC00200-202ENST00000583117 UPF1Q92900 1129 aaKnown RBP eCLIP24.5■■□□□ 1.51
LINC00200-202ENST00000583117 LRRC37A3O60309 1634 aa24.5■■□□□ 1.51
LINC00200-202ENST00000583117 RGPD2P0DJD1 1756 aa24.48■■□□□ 1.51
LINC00200-202ENST00000583117 CCDC125Q86Z20 511 aa24.48■■□□□ 1.51
LINC00200-202ENST00000583117 EXOC5O00471 708 aa24.47■■□□□ 1.51
LINC00200-202ENST00000583117 NBPF6Q5VWK0 638 aa24.47■■□□□ 1.51
LINC00200-202ENST00000583117 NBPF4Q96M43 638 aa24.47■■□□□ 1.51
LINC00200-202ENST00000583117 FAM196AQ6ZSG2 479 aa24.46■■□□□ 1.51
LINC00200-202ENST00000583117 TNS2Q63HR2 1409 aa24.44■■□□□ 1.5
LINC00200-202ENST00000583117 DDX10Q13206 875 aaKnown RBP24.44■■□□□ 1.5
LINC00200-202ENST00000583117 CNGB1Q14028 1251 aaPredicted RBP24.44■■□□□ 1.5
LINC00200-202ENST00000583117 MTHFSP49914 203 aa24.43■■□□□ 1.5
LINC00200-202ENST00000583117 EIF4A2Q14240 407 aaKnown RBP24.43■■□□□ 1.5
LINC00200-202ENST00000583117 RAPGEF4Q8WZA2 1011 aa24.42■■□□□ 1.5
LINC00200-202ENST00000583117 OVOS2A0A0G2JMS6 1433 aa24.42■■□□□ 1.5
LINC00200-202ENST00000583117 NCAPD2Q15021 1401 aa24.42■■□□□ 1.5
LINC00200-202ENST00000583117 FAM182BQ5T319 152 aa24.41■■□□□ 1.5
LINC00200-202ENST00000583117 USHBP1Q8N6Y0 703 aa24.4■■□□□ 1.5
LINC00200-202ENST00000583117 EYA1Q99502 592 aa24.4■■□□□ 1.5
LINC00200-202ENST00000583117 ZNF316A6NFI3 1004 aaPredicted RBP24.39■■□□□ 1.49
LINC00200-202ENST00000583117 SF3B2Q13435 895 aaKnown RBP24.39■■□□□ 1.49
LINC00200-202ENST00000583117 TATP17735 454 aaPredicted RBP24.38■■□□□ 1.49
LINC00200-202ENST00000583117 BCL9O00512 1426 aa24.37■■□□□ 1.49
LINC00200-202ENST00000583117 MEGF6O75095 1541 aa24.37■■□□□ 1.49
LINC00200-202ENST00000583117 MARCH10Q8NA82 808 aaPredicted RBP24.37■■□□□ 1.49
LINC00200-202ENST00000583117 RGPD1P0DJD0 1748 aa24.36■■□□□ 1.49
LINC00200-202ENST00000583117 IGSF1Q8N6C5 1336 aa24.35■■□□□ 1.49
LINC00200-202ENST00000583117 EP400Q96L91 3159 aa24.35■■□□□ 1.49
LINC00200-202ENST00000583117 PLEKHG2Q9H7P9 1386 aa24.35■■□□□ 1.49
LINC00200-202ENST00000583117 ZCRB1Q8TBF4 217 aaKnown RBP24.35■■□□□ 1.49
LINC00200-202ENST00000583117 PARD3Q8TEW0 1356 aa24.34■■□□□ 1.49
LINC00200-202ENST00000583117 IL13P35225 146 aa24.34■■□□□ 1.49
LINC00200-202ENST00000583117 DIAPH1O60610 1272 aaKnown RBP24.33■■□□□ 1.49
LINC00200-202ENST00000583117 PPP2R1AP30153 589 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms