RNA–Protein interactions for RNA: ENST00000583053.1

CCDC57-217, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-217ENST00000583053 MYT1Q01538 1121 aa18.96■□□□□ 0.63
CCDC57-217ENST00000583053 UPF1Q92900 1129 aaKnown RBP eCLIP18.96■□□□□ 0.63
CCDC57-217ENST00000583053 GGNBP2Q9H3C7 697 aa18.96■□□□□ 0.63
CCDC57-217ENST00000583053 USP35Q9P2H5 1018 aa18.95■□□□□ 0.62
CCDC57-217ENST00000583053 MYOM1P52179 1685 aa18.95■□□□□ 0.62
CCDC57-217ENST00000583053 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
CCDC57-217ENST00000583053 BARGINQ6ZT62 677 aa18.93■□□□□ 0.62
CCDC57-217ENST00000583053 TCP11L2Q8N4U5 519 aa18.93■□□□□ 0.62
CCDC57-217ENST00000583053 THRAP3Q9Y2W1 955 aaKnown RBP18.93■□□□□ 0.62
CCDC57-217ENST00000583053 WDR17Q8IZU2 1322 aa18.93■□□□□ 0.62
CCDC57-217ENST00000583053 CRB1P82279 1406 aa18.92■□□□□ 0.62
CCDC57-217ENST00000583053 TOM1L2Q6ZVM7 507 aa18.92■□□□□ 0.62
CCDC57-217ENST00000583053 KRT27Q7Z3Y8 459 aa18.92■□□□□ 0.62
CCDC57-217ENST00000583053 COL18A1P39060 1754 aa18.91■□□□□ 0.62
CCDC57-217ENST00000583053 ABCC6O95255 1503 aa18.91■□□□□ 0.62
CCDC57-217ENST00000583053 PANK3Q9H999 370 aa18.91■□□□□ 0.62
CCDC57-217ENST00000583053 KIF7Q2M1P5 1343 aa18.91■□□□□ 0.62
CCDC57-217ENST00000583053 CSB-PGBD3P0DP91 1061 aa18.9■□□□□ 0.62
CCDC57-217ENST00000583053 CGNL1Q0VF96 1302 aa18.9■□□□□ 0.62
CCDC57-217ENST00000583053 FBLN1P23142 703 aa18.89■□□□□ 0.61
CCDC57-217ENST00000583053 IP6K1Q92551 441 aa18.89■□□□□ 0.61
CCDC57-217ENST00000583053 MAP3K19Q56UN5 1328 aa18.88■□□□□ 0.61
CCDC57-217ENST00000583053 ERBB3P21860 1342 aa18.87■□□□□ 0.61
CCDC57-217ENST00000583053 CARD10Q9BWT7 1032 aa18.87■□□□□ 0.61
CCDC57-217ENST00000583053 BLMP54132 1417 aaPredicted RBP18.86■□□□□ 0.61
CCDC57-217ENST00000583053 AMPHP49418 695 aa18.86■□□□□ 0.61
CCDC57-217ENST00000583053 ANKRD24Q8TF21 1146 aa18.86■□□□□ 0.61
CCDC57-217ENST00000583053 THSD7AQ9UPZ6 1657 aa18.85■□□□□ 0.61
CCDC57-217ENST00000583053 HOXC9P31274 260 aa18.85■□□□□ 0.61
CCDC57-217ENST00000583053 RRS1Q15050 365 aaKnown RBP18.85■□□□□ 0.61
CCDC57-217ENST00000583053 CCDC125Q86Z20 511 aa18.85■□□□□ 0.61
CCDC57-217ENST00000583053 PDE3BQ13370 1112 aa18.83■□□□□ 0.6
CCDC57-217ENST00000583053 CDCA7Q9BWT1 371 aaPredicted RBP18.83■□□□□ 0.6
CCDC57-217ENST00000583053 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
CCDC57-217ENST00000583053 CCDC7Q96M83 1385 aa18.82■□□□□ 0.6
CCDC57-217ENST00000583053 WASHC2AQ641Q2 1341 aa18.82■□□□□ 0.6
CCDC57-217ENST00000583053 NLRP2Q9NX02 1062 aa18.82■□□□□ 0.6
CCDC57-217ENST00000583053 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
CCDC57-217ENST00000583053 BRWD3Q6RI45 1802 aa18.81■□□□□ 0.6
CCDC57-217ENST00000583053 LTN1O94822 1766 aa18.81■□□□□ 0.6
CCDC57-217ENST00000583053 FAM182BQ5T319 152 aa18.81■□□□□ 0.6
CCDC57-217ENST00000583053 KIF20BQ96Q89 1820 aa18.81■□□□□ 0.6
CCDC57-217ENST00000583053 KIF24Q5T7B8 1368 aa18.81■□□□□ 0.6
CCDC57-217ENST00000583053 LTV1Q96GA3 475 aaPredicted RBP18.8■□□□□ 0.6
CCDC57-217ENST00000583053 NSD2O96028 1365 aa18.8■□□□□ 0.6
CCDC57-217ENST00000583053 RGPD5Q99666 1765 aa18.79■□□□□ 0.6
CCDC57-217ENST00000583053 DDB1Q16531 1140 aa18.79■□□□□ 0.6
CCDC57-217ENST00000583053 EP400Q96L91 3159 aa18.79■□□□□ 0.6
CCDC57-217ENST00000583053 FAM196AQ6ZSG2 479 aa18.78■□□□□ 0.6
CCDC57-217ENST00000583053 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
CCDC57-217ENST00000583053 FLT4P35916 1363 aa18.78■□□□□ 0.6
CCDC57-217ENST00000583053 DISP2A7MBM2 1401 aa18.77■□□□□ 0.6
CCDC57-217ENST00000583053 SF3B2Q13435 895 aaKnown RBP18.77■□□□□ 0.6
CCDC57-217ENST00000583053 HSP90AB2PQ58FF8 381 aa18.77■□□□□ 0.6
CCDC57-217ENST00000583053 INSRP06213 1382 aa18.77■□□□□ 0.6
CCDC57-217ENST00000583053 PER1O15534 1290 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-217ENST00000583053 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-217ENST00000583053 EXOC5O00471 708 aa18.75■□□□□ 0.59
CCDC57-217ENST00000583053 PPM1GO15355 546 aaPredicted RBP18.75■□□□□ 0.59
CCDC57-217ENST00000583053 IL2RBP14784 551 aa18.75■□□□□ 0.59
CCDC57-217ENST00000583053 AMER1Q5JTC6 1135 aaPredicted RBP18.75■□□□□ 0.59
CCDC57-217ENST00000583053 MORC1Q86VD1 984 aa18.75■□□□□ 0.59
CCDC57-217ENST00000583053 POLKQ9UBT6 870 aa18.75■□□□□ 0.59
CCDC57-217ENST00000583053 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
CCDC57-217ENST00000583053 PARP4Q9UKK3 1724 aaKnown RBP18.74■□□□□ 0.59
CCDC57-217ENST00000583053 NBPF6Q5VWK0 638 aa18.72■□□□□ 0.59
CCDC57-217ENST00000583053 NBPF4Q96M43 638 aa18.72■□□□□ 0.59
CCDC57-217ENST00000583053 MARCH10Q8NA82 808 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-217ENST00000583053 LRRC37A3O60309 1634 aa18.71■□□□□ 0.58
CCDC57-217ENST00000583053 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
CCDC57-217ENST00000583053 TRIM37O94972 964 aa18.7■□□□□ 0.58
CCDC57-217ENST00000583053 DEFB132Q7Z7B7 95 aa18.7■□□□□ 0.58
CCDC57-217ENST00000583053 PEAK1Q9H792 1746 aa18.7■□□□□ 0.58
CCDC57-217ENST00000583053 TNS2Q63HR2 1409 aa18.69■□□□□ 0.58
CCDC57-217ENST00000583053 BAG6P46379 1132 aa18.69■□□□□ 0.58
CCDC57-217ENST00000583053 FAM208AQ9UK61 1670 aaKnown RBP18.69■□□□□ 0.58
CCDC57-217ENST00000583053 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
CCDC57-217ENST00000583053 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
CCDC57-217ENST00000583053 CC2D1BQ5T0F9 858 aaKnown RBP18.67■□□□□ 0.58
CCDC57-217ENST00000583053 USHBP1Q8N6Y0 703 aa18.67■□□□□ 0.58
CCDC57-217ENST00000583053 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
CCDC57-217ENST00000583053 NPC1L1Q9UHC9 1359 aa18.67■□□□□ 0.58
CCDC57-217ENST00000583053 BCL9O00512 1426 aa18.66■□□□□ 0.58
CCDC57-217ENST00000583053 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
CCDC57-217ENST00000583053 APBA3O96018 575 aa18.65■□□□□ 0.58
CCDC57-217ENST00000583053 EN1Q05925 392 aaPredicted RBP18.64■□□□□ 0.57
CCDC57-217ENST00000583053 EIF4A2Q14240 407 aaKnown RBP18.64■□□□□ 0.57
CCDC57-217ENST00000583053 TATP17735 454 aaPredicted RBP18.63■□□□□ 0.57
CCDC57-217ENST00000583053 ZCRB1Q8TBF4 217 aaKnown RBP18.63■□□□□ 0.57
CCDC57-217ENST00000583053 DDX54Q8TDD1 881 aaKnown RBP18.63■□□□□ 0.57
CCDC57-217ENST00000583053 EYA1Q99502 592 aa18.63■□□□□ 0.57
CCDC57-217ENST00000583053 MEGF6O75095 1541 aa18.63■□□□□ 0.57
CCDC57-217ENST00000583053 BCL11BQ9C0K0 894 aaPredicted RBP18.62■□□□□ 0.57
CCDC57-217ENST00000583053 RGPD1P0DJD0 1748 aa18.62■□□□□ 0.57
CCDC57-217ENST00000583053 MAP2P11137 1827 aaKnown RBP18.61■□□□□ 0.57
CCDC57-217ENST00000583053 NCAPD2Q15021 1401 aa18.6■□□□□ 0.57
CCDC57-217ENST00000583053 MTHFSP49914 203 aa18.6■□□□□ 0.57
CCDC57-217ENST00000583053 CNGB1Q14028 1251 aaPredicted RBP18.6■□□□□ 0.57
CCDC57-217ENST00000583053 CAMKK2Q96RR4 588 aa18.6■□□□□ 0.57
CCDC57-217ENST00000583053 EZH2Q15910 746 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms