RNA–Protein interactions for RNA: ENST00000582856.2

RN7SL556P-201, Transcript of RNA, 7SL, cytoplasmic 556, pseudogene, humanhuman

BASIC

Gene RN7SL556P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL556P-201ENST00000582856 AXIN2Q9Y2T1 843 aa18.89■□□□□ 0.61
RN7SL556P-201ENST00000582856 CDK12Q9NYV4 1490 aaPredicted RBP18.89■□□□□ 0.61
RN7SL556P-201ENST00000582856 PEAK1Q9H792 1746 aa18.88■□□□□ 0.61
RN7SL556P-201ENST00000582856 GJD4Q96KN9 370 aaPredicted RBP18.88■□□□□ 0.61
RN7SL556P-201ENST00000582856 MAP2P11137 1827 aaKnown RBP18.88■□□□□ 0.61
RN7SL556P-201ENST00000582856 RGS12O14924 1447 aa18.87■□□□□ 0.61
RN7SL556P-201ENST00000582856 PER1O15534 1290 aaPredicted RBP18.87■□□□□ 0.61
RN7SL556P-201ENST00000582856 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
RN7SL556P-201ENST00000582856 SPATA31A5Q5VU36 1347 aa18.85■□□□□ 0.61
RN7SL556P-201ENST00000582856 SPATA31A7Q8IWB4 1347 aa18.85■□□□□ 0.61
RN7SL556P-201ENST00000582856 STRN4Q9NRL3 753 aa18.85■□□□□ 0.61
RN7SL556P-201ENST00000582856 BRWD3Q6RI45 1802 aa18.85■□□□□ 0.61
RN7SL556P-201ENST00000582856 NSD2O96028 1365 aa18.84■□□□□ 0.61
RN7SL556P-201ENST00000582856 WNK3Q9BYP7 1800 aa18.84■□□□□ 0.61
RN7SL556P-201ENST00000582856 AMER1Q5JTC6 1135 aaPredicted RBP18.84■□□□□ 0.61
RN7SL556P-201ENST00000582856 THSD7AQ9UPZ6 1657 aa18.83■□□□□ 0.61
RN7SL556P-201ENST00000582856 RRS1Q15050 365 aaKnown RBP18.83■□□□□ 0.6
RN7SL556P-201ENST00000582856 LARP1Q6PKG0 1096 aaKnown RBP18.83■□□□□ 0.6
RN7SL556P-201ENST00000582856 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
RN7SL556P-201ENST00000582856 SPATA31A1Q5TZJ5 1347 aa18.82■□□□□ 0.6
RN7SL556P-201ENST00000582856 CCDC9Q9Y3X0 531 aaKnown RBP18.82■□□□□ 0.6
RN7SL556P-201ENST00000582856 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
RN7SL556P-201ENST00000582856 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
RN7SL556P-201ENST00000582856 BLMP54132 1417 aaPredicted RBP18.82■□□□□ 0.6
RN7SL556P-201ENST00000582856 CRB1P82279 1406 aa18.82■□□□□ 0.6
RN7SL556P-201ENST00000582856 EVA1CP58658 441 aa18.81■□□□□ 0.6
RN7SL556P-201ENST00000582856 WDR17Q8IZU2 1322 aa18.8■□□□□ 0.6
RN7SL556P-201ENST00000582856 IP6K1Q92551 441 aa18.8■□□□□ 0.6
RN7SL556P-201ENST00000582856 RTL1A6NKG5 1358 aa18.8■□□□□ 0.6
RN7SL556P-201ENST00000582856 ONECUT3O60422 494 aaPredicted RBP18.79■□□□□ 0.6
RN7SL556P-201ENST00000582856 HOXC9P31274 260 aa18.79■□□□□ 0.6
RN7SL556P-201ENST00000582856 ERBB3P21860 1342 aa18.78■□□□□ 0.6
RN7SL556P-201ENST00000582856 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
RN7SL556P-201ENST00000582856 NPC1L1Q9UHC9 1359 aa18.78■□□□□ 0.6
RN7SL556P-201ENST00000582856 FAM98CQ17RN3 349 aaKnown RBP18.77■□□□□ 0.6
RN7SL556P-201ENST00000582856 KIF24Q5T7B8 1368 aa18.77■□□□□ 0.6
RN7SL556P-201ENST00000582856 PARP4Q9UKK3 1724 aaKnown RBP18.77■□□□□ 0.59
RN7SL556P-201ENST00000582856 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
RN7SL556P-201ENST00000582856 AMPHP49418 695 aa18.76■□□□□ 0.59
RN7SL556P-201ENST00000582856 ANKRD24Q8TF21 1146 aa18.76■□□□□ 0.59
RN7SL556P-201ENST00000582856 USP35Q9P2H5 1018 aa18.76■□□□□ 0.59
RN7SL556P-201ENST00000582856 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
RN7SL556P-201ENST00000582856 TOM1L2Q6ZVM7 507 aa18.75■□□□□ 0.59
RN7SL556P-201ENST00000582856 MORC1Q86VD1 984 aa18.75■□□□□ 0.59
RN7SL556P-201ENST00000582856 POLKQ9UBT6 870 aa18.75■□□□□ 0.59
RN7SL556P-201ENST00000582856 FLT4P35916 1363 aa18.75■□□□□ 0.59
RN7SL556P-201ENST00000582856 INSRP06213 1382 aa18.74■□□□□ 0.59
RN7SL556P-201ENST00000582856 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
RN7SL556P-201ENST00000582856 BARGINQ6ZT62 677 aa18.74■□□□□ 0.59
RN7SL556P-201ENST00000582856 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
RN7SL556P-201ENST00000582856 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
RN7SL556P-201ENST00000582856 LRRC37A3O60309 1634 aa18.74■□□□□ 0.59
RN7SL556P-201ENST00000582856 CSB-PGBD3P0DP91 1061 aa18.73■□□□□ 0.59
RN7SL556P-201ENST00000582856 HSP90AB2PQ58FF8 381 aa18.73■□□□□ 0.59
RN7SL556P-201ENST00000582856 CARD10Q9BWT7 1032 aa18.73■□□□□ 0.59
RN7SL556P-201ENST00000582856 THRAP3Q9Y2W1 955 aaKnown RBP18.72■□□□□ 0.59
RN7SL556P-201ENST00000582856 DISP2A7MBM2 1401 aa18.72■□□□□ 0.59
RN7SL556P-201ENST00000582856 LTV1Q96GA3 475 aaPredicted RBP18.71■□□□□ 0.59
RN7SL556P-201ENST00000582856 SOCS7O14512 581 aa18.69■□□□□ 0.58
RN7SL556P-201ENST00000582856 PPM1GO15355 546 aaPredicted RBP18.69■□□□□ 0.58
RN7SL556P-201ENST00000582856 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
RN7SL556P-201ENST00000582856 NLRP2Q9NX02 1062 aa18.69■□□□□ 0.58
RN7SL556P-201ENST00000582856 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
RN7SL556P-201ENST00000582856 EP400Q96L91 3159 aa18.67■□□□□ 0.58
RN7SL556P-201ENST00000582856 A0A0G2JS52 829 aa18.67■□□□□ 0.58
RN7SL556P-201ENST00000582856 MYT1Q01538 1121 aa18.67■□□□□ 0.58
RN7SL556P-201ENST00000582856 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
RN7SL556P-201ENST00000582856 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
RN7SL556P-201ENST00000582856 KRT27Q7Z3Y8 459 aa18.65■□□□□ 0.58
RN7SL556P-201ENST00000582856 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
RN7SL556P-201ENST00000582856 RGPD1P0DJD0 1748 aa18.65■□□□□ 0.58
RN7SL556P-201ENST00000582856 SHANK3Q9BYB0 1731 aa18.65■□□□□ 0.58
RN7SL556P-201ENST00000582856 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
RN7SL556P-201ENST00000582856 EIF4A2Q14240 407 aaKnown RBP18.63■□□□□ 0.57
RN7SL556P-201ENST00000582856 MEGF6O75095 1541 aa18.63■□□□□ 0.57
RN7SL556P-201ENST00000582856 MTHFSP49914 203 aa18.62■□□□□ 0.57
RN7SL556P-201ENST00000582856 FAM182BQ5T319 152 aa18.62■□□□□ 0.57
RN7SL556P-201ENST00000582856 USHBP1Q8N6Y0 703 aa18.62■□□□□ 0.57
RN7SL556P-201ENST00000582856 CDCA7Q9BWT1 371 aaPredicted RBP18.62■□□□□ 0.57
RN7SL556P-201ENST00000582856 TNS2Q63HR2 1409 aa18.62■□□□□ 0.57
RN7SL556P-201ENST00000582856 COL3A1P02461 1466 aaPredicted RBP18.62■□□□□ 0.57
RN7SL556P-201ENST00000582856 PARD3Q8TEW0 1356 aa18.61■□□□□ 0.57
RN7SL556P-201ENST00000582856 SBF2Q86WG5 1849 aa18.6■□□□□ 0.57
RN7SL556P-201ENST00000582856 IL2RBP14784 551 aa18.6■□□□□ 0.57
RN7SL556P-201ENST00000582856 EYA1Q99502 592 aa18.6■□□□□ 0.57
RN7SL556P-201ENST00000582856 DDB1Q16531 1140 aa18.59■□□□□ 0.57
RN7SL556P-201ENST00000582856 UPF1Q92900 1129 aaKnown RBP eCLIP18.59■□□□□ 0.57
RN7SL556P-201ENST00000582856 PKD1L3Q7Z443 1732 aa18.59■□□□□ 0.57
RN7SL556P-201ENST00000582856 TNS1Q9HBL0 1735 aaKnown RBP18.58■□□□□ 0.57
RN7SL556P-201ENST00000582856 PPP2R1AP30153 589 aa18.58■□□□□ 0.56
RN7SL556P-201ENST00000582856 OVOS2A0A0G2JMS6 1433 aa18.57■□□□□ 0.56
RN7SL556P-201ENST00000582856 IGSF1Q8N6C5 1336 aa18.57■□□□□ 0.56
RN7SL556P-201ENST00000582856 IL13P35225 146 aa18.57■□□□□ 0.56
RN7SL556P-201ENST00000582856 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
RN7SL556P-201ENST00000582856 MARCH10Q8NA82 808 aaPredicted RBP18.56■□□□□ 0.56
RN7SL556P-201ENST00000582856 EXOC5O00471 708 aa18.55■□□□□ 0.56
RN7SL556P-201ENST00000582856 BCL9O00512 1426 aa18.52■□□□□ 0.56
RN7SL556P-201ENST00000582856 FAM196AQ6ZSG2 479 aa18.52■□□□□ 0.56
RN7SL556P-201ENST00000582856 RAPGEF4Q8WZA2 1011 aa18.52■□□□□ 0.56
RN7SL556P-201ENST00000582856 TATP17735 454 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms