RNA–Protein interactions for RNA: ENST00000582681.1

NUP85-218, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-218ENST00000582681 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
NUP85-218ENST00000582681 GJD4Q96KN9 370 aaPredicted RBP10.78□□□□□ -0.68
NUP85-218ENST00000582681 QTRT2Q9H974 415 aaKnown RBP10.78□□□□□ -0.68
NUP85-218ENST00000582681 SPATA31A5Q5VU36 1347 aa10.78□□□□□ -0.68
NUP85-218ENST00000582681 SPATA31A7Q8IWB4 1347 aa10.78□□□□□ -0.68
NUP85-218ENST00000582681 PLEKHG5O94827 1062 aa10.77□□□□□ -0.69
NUP85-218ENST00000582681 RXRBP28702 533 aa10.77□□□□□ -0.69
NUP85-218ENST00000582681 ZC3H6P61129 1189 aaKnown RBP10.77□□□□□ -0.69
NUP85-218ENST00000582681 COG3Q96JB2 828 aa10.77□□□□□ -0.69
NUP85-218ENST00000582681 PANK3Q9H999 370 aa10.77□□□□□ -0.69
NUP85-218ENST00000582681 BTG4Q9NY30 223 aa10.77□□□□□ -0.69
NUP85-218ENST00000582681 WNK3Q9BYP7 1800 aa10.77□□□□□ -0.69
NUP85-218ENST00000582681 CRB1P82279 1406 aa10.76□□□□□ -0.69
NUP85-218ENST00000582681 PEAK1Q9H792 1746 aa10.76□□□□□ -0.69
NUP85-218ENST00000582681 RGPD5Q99666 1765 aa10.76□□□□□ -0.69
NUP85-218ENST00000582681 AMER1Q5JTC6 1135 aaPredicted RBP10.76□□□□□ -0.69
NUP85-218ENST00000582681 SPATA31A1Q5TZJ5 1347 aa10.76□□□□□ -0.69
NUP85-218ENST00000582681 NCAPD2Q15021 1401 aa10.75□□□□□ -0.69
NUP85-218ENST00000582681 CHRNA2Q15822 529 aa10.75□□□□□ -0.69
NUP85-218ENST00000582681 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
NUP85-218ENST00000582681 ERBB3P21860 1342 aa10.75□□□□□ -0.69
NUP85-218ENST00000582681 MAP3K19Q56UN5 1328 aa10.75□□□□□ -0.69
NUP85-218ENST00000582681 WDR17Q8IZU2 1322 aa10.75□□□□□ -0.69
NUP85-218ENST00000582681 PARP4Q9UKK3 1724 aaKnown RBP10.75□□□□□ -0.69
NUP85-218ENST00000582681 DISP2A7MBM2 1401 aa10.75□□□□□ -0.69
NUP85-218ENST00000582681 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
NUP85-218ENST00000582681 IP6K1Q92551 441 aa10.74□□□□□ -0.69
NUP85-218ENST00000582681 GGNBP2Q9H3C7 697 aa10.74□□□□□ -0.69
NUP85-218ENST00000582681 THRAP3Q9Y2W1 955 aaKnown RBP10.74□□□□□ -0.69
NUP85-218ENST00000582681 INSRP06213 1382 aa10.73□□□□□ -0.69
NUP85-218ENST00000582681 BRWD3Q6RI45 1802 aa10.72□□□□□ -0.69
NUP85-218ENST00000582681 FLT4P35916 1363 aa10.72□□□□□ -0.69
NUP85-218ENST00000582681 PLEKHG2Q9H7P9 1386 aa10.72□□□□□ -0.69
NUP85-218ENST00000582681 MAP2P11137 1827 aaKnown RBP10.72□□□□□ -0.69
NUP85-218ENST00000582681 LARP1Q6PKG0 1096 aaKnown RBP10.71□□□□□ -0.69
NUP85-218ENST00000582681 CARD10Q9BWT7 1032 aa10.71□□□□□ -0.69
NUP85-218ENST00000582681 KNSTRNQ9Y448 316 aa10.71□□□□□ -0.69
NUP85-218ENST00000582681 LRRC37A3O60309 1634 aa10.7□□□□□ -0.7
NUP85-218ENST00000582681 EP400Q96L91 3159 aa10.7□□□□□ -0.7
NUP85-218ENST00000582681 BCL9O00512 1426 aa10.7□□□□□ -0.7
NUP85-218ENST00000582681 HOXC9P31274 260 aa10.7□□□□□ -0.7
NUP85-218ENST00000582681 TCP11L2Q8N4U5 519 aa10.7□□□□□ -0.7
NUP85-218ENST00000582681 POLKQ9UBT6 870 aa10.7□□□□□ -0.7
NUP85-218ENST00000582681 RGPD1P0DJD0 1748 aa10.68□□□□□ -0.7
NUP85-218ENST00000582681 CDCA7Q9BWT1 371 aaPredicted RBP10.68□□□□□ -0.7
NUP85-218ENST00000582681 SOX12O15370 315 aa10.67□□□□□ -0.7
NUP85-218ENST00000582681 FBLN1P23142 703 aa10.67□□□□□ -0.7
NUP85-218ENST00000582681 EVA1CP58658 441 aa10.67□□□□□ -0.7
NUP85-218ENST00000582681 RRS1Q15050 365 aaKnown RBP10.67□□□□□ -0.7
NUP85-218ENST00000582681 SEPT12Q8IYM1 358 aa10.67□□□□□ -0.7
NUP85-218ENST00000582681 ANKRD24Q8TF21 1146 aa10.67□□□□□ -0.7
NUP85-218ENST00000582681 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
NUP85-218ENST00000582681 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
NUP85-218ENST00000582681 TNS2Q63HR2 1409 aa10.67□□□□□ -0.7
NUP85-218ENST00000582681 FAM98CQ17RN3 349 aaKnown RBP10.66□□□□□ -0.7
NUP85-218ENST00000582681 STRN4Q9NRL3 753 aa10.66□□□□□ -0.7
NUP85-218ENST00000582681 RGPD2P0DJD1 1756 aa10.66□□□□□ -0.7
NUP85-218ENST00000582681 COL3A1P02461 1466 aaPredicted RBP10.66□□□□□ -0.7
NUP85-218ENST00000582681 PARD3Q8TEW0 1356 aa10.65□□□□□ -0.7
NUP85-218ENST00000582681 AMPHP49418 695 aa10.65□□□□□ -0.7
NUP85-218ENST00000582681 HSP90AB2PQ58FF8 381 aa10.65□□□□□ -0.7
NUP85-218ENST00000582681 TOM1L2Q6ZVM7 507 aa10.65□□□□□ -0.7
NUP85-218ENST00000582681 OVOS2A0A0G2JMS6 1433 aa10.65□□□□□ -0.7
NUP85-218ENST00000582681 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
NUP85-218ENST00000582681 SHANK3Q9BYB0 1731 aa10.64□□□□□ -0.71
NUP85-218ENST00000582681 MORC1Q86VD1 984 aa10.64□□□□□ -0.71
NUP85-218ENST00000582681 KRT27Q7Z3Y8 459 aa10.63□□□□□ -0.71
NUP85-218ENST00000582681 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
NUP85-218ENST00000582681 KDRP35968 1356 aa10.63□□□□□ -0.71
NUP85-218ENST00000582681 MEGF6O75095 1541 aa10.63□□□□□ -0.71
NUP85-218ENST00000582681 IGSF1Q8N6C5 1336 aa10.62□□□□□ -0.71
NUP85-218ENST00000582681 TNS1Q9HBL0 1735 aaKnown RBP10.62□□□□□ -0.71
NUP85-218ENST00000582681 NBPF6Q5VWK0 638 aa10.62□□□□□ -0.71
NUP85-218ENST00000582681 NBPF4Q96M43 638 aa10.62□□□□□ -0.71
NUP85-218ENST00000582681 SBF2Q86WG5 1849 aa10.61□□□□□ -0.71
NUP85-218ENST00000582681 ZBTB7CA1YPR0 619 aa10.61□□□□□ -0.71
NUP85-218ENST00000582681 IL2RBP14784 551 aa10.61□□□□□ -0.71
NUP85-218ENST00000582681 CCDC125Q86Z20 511 aa10.61□□□□□ -0.71
NUP85-218ENST00000582681 UPF1Q92900 1129 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUP85-218ENST00000582681 NLRP2Q9NX02 1062 aa10.61□□□□□ -0.71
NUP85-218ENST00000582681 RGPD3A6NKT7 1758 aaPredicted RBP10.61□□□□□ -0.71
NUP85-218ENST00000582681 RGPD4Q7Z3J3 1758 aa10.61□□□□□ -0.71
NUP85-218ENST00000582681 CSB-PGBD3P0DP91 1061 aa10.6□□□□□ -0.71
NUP85-218ENST00000582681 EIF4A2Q14240 407 aaKnown RBP10.6□□□□□ -0.71
NUP85-218ENST00000582681 IL13P35225 146 aa10.59□□□□□ -0.71
NUP85-218ENST00000582681 MTHFSP49914 203 aa10.59□□□□□ -0.71
NUP85-218ENST00000582681 DDB1Q16531 1140 aa10.59□□□□□ -0.71
NUP85-218ENST00000582681 EYA1Q99502 592 aa10.59□□□□□ -0.71
NUP85-218ENST00000582681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.71
NUP85-218ENST00000582681 USP35Q9P2H5 1018 aa10.59□□□□□ -0.71
NUP85-218ENST00000582681 NHSQ6T4R5 1651 aa10.58□□□□□ -0.72
NUP85-218ENST00000582681 CC2D1BQ5T0F9 858 aaKnown RBP10.58□□□□□ -0.72
NUP85-218ENST00000582681 FAM196AQ6ZSG2 479 aa10.58□□□□□ -0.72
NUP85-218ENST00000582681 MARCH10Q8NA82 808 aaPredicted RBP10.58□□□□□ -0.72
NUP85-218ENST00000582681 A0A0G2JS52 829 aa10.57□□□□□ -0.72
NUP85-218ENST00000582681 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
NUP85-218ENST00000582681 TNNT2P45379 298 aaPredicted RBP10.57□□□□□ -0.72
NUP85-218ENST00000582681 EXOC5O00471 708 aa10.56□□□□□ -0.72
NUP85-218ENST00000582681 PPP2R1AP30153 589 aa10.56□□□□□ -0.72
NUP85-218ENST00000582681 PDE3BQ13370 1112 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms